RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 FADS2O95864 444 aaKnown RBP2.67□□□□□ -1.98
LIMA1-208ENST00000551691 INSP01308 110 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 HLA-DPB1P04440 258 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 P0C879 139 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 CD79AP11912 226 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 RAB3AP20336 220 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 UBE2AP49459 152 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 TAS2R46P59540 309 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 HERVK_113P61574 105 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 ARF6P62330 175 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 IFFO1Q0D2I5 559 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 OR4D1Q15615 310 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 PSG3Q16557 428 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 GUCA2BQ16661 112 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 ARHGAP11BQ3KRB8 267 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 UTF1Q5T230 341 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 HES5Q5TA89 166 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 METTL21CQ5VZV1 264 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 STEAP4Q687X5 459 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 C10orf99Q6UWK7 81 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 LINC00336Q6ZUF6 198 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 CBLN2Q8IUK8 224 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 ZNF101Q8IZC7 436 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 C19orf18Q8NEA5 215 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 OR11H7Q8NGC8 314 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 OR10J6PQ8NGY7 276 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 SYNPRQ8TBG9 265 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 HDHD3Q9BSH5 251 aaPredicted RBP2.67□□□□□ -1.98
LIMA1-208ENST00000551691 WDR55Q9H6Y2 383 aaPredicted RBP2.67□□□□□ -1.98
LIMA1-208ENST00000551691 MED4Q9NPJ6 270 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 TAS2R9Q9NYW1 312 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 Q9UF83 564 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 TRAPPC4Q9Y296 219 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 RNF11Q9Y3C5 154 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 ZNF780BQ9Y6R6 833 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 FAT1Q14517 4588 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 DNAH5Q8TE73 4624 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 TANC2Q9HCD6 1990 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 TCRBV4S1A1TA0A5B7 111 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 FAM168BA1KXE4 195 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 H3BUX3 64 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 GATCO43716 136 aaKnown RBP2.66□□□□□ -1.98
LIMA1-208ENST00000551691 SUPT3HO75486 399 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 UPK1BO75841 260 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 KCNK2O95069 426 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 PTTG1O95997 202 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 CST4P01036 141 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 GNAO1P09471 354 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 OR12D1P0DN82 309 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 PRPS2P11908 318 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 ELK4P28324 431 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 MPV17P39210 176 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 HTR2BP41595 481 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 RAB13P51153 203 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 HCCSP53701 268 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 TSPAN5P62079 268 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 RPS23P62266 143 aaKnown RBP2.66□□□□□ -1.98
LIMA1-208ENST00000551691 RPL31P62899 125 aaKnown RBP2.66□□□□□ -1.98
LIMA1-208ENST00000551691 BASP1P80723 227 aaKnown RBP2.66□□□□□ -1.98
LIMA1-208ENST00000551691 H3F3AP84243 136 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 TNXAQ16473 311 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 SLC25A30Q5SVS4 291 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 FAHD1Q6P587 224 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 OLIG3Q7RTU3 272 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 ZNF584Q8IVC4 421 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 SPICQ8N5J4 248 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 FAM71E2Q8N5Q1 922 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 C20orf203Q8NBC4 194 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 OR4C13Q8NGP0 309 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 OR10Z1Q8NGY1 313 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 ZNF675Q8TD23 568 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 GTF2H4Q92759 462 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 MRGPRFQ96AM1 343 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 GALNT14Q96FL9 552 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 GFRA4Q9GZZ7 299 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 ISYNA1Q9NPH2 558 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 OR2S2Q9NQN1 319 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 TMEM106BQ9NUM4 274 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 ZNRD1Q9P1U0 126 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 MTFP1Q9UDX5 166 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 ENPP5Q9UJA9 477 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 ZNF225Q9UK10 706 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 SMAD5-AS1Q9Y6J3 95 aa2.66□□□□□ -1.98
LIMA1-208ENST00000551691 IGLV3-9A0A075B6K5 115 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 ANKRD20A5PA0PJZ0 165 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 KRTAP16-1A8MUX0 517 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 MYL12BO14950 172 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 NPIPB7O75200 414 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 E2F6O75461 281 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 CA11O75493 328 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 BANF1O75531 89 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 PIAS1O75925 651 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 TNFAIP8O95379 198 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 CYB5R3P00387 301 aaPredicted RBP2.65□□□□□ -1.99
LIMA1-208ENST00000551691 MOSP00540 346 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 IL3P08700 152 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 CD3GP09693 182 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 PGA5P0DJD9 388 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 CRISP2P16562 243 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 PGAM1P18669 254 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms