RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 PJVKQ0ZLH3 352 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 ZNF429Q86V71 674 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 TCTEX1D1Q8N7M0 179 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 OR4A4PQ8NGN8 299 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 RAB3CQ96E17 227 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 C5orf30Q96GV9 206 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 RHOVQ96L33 236 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 CNBD2Q96M20 576 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.29□□□□□ -0.76
CPSF6-204ENST00000547486 ZNF230Q9UIE0 474 aaPredicted RBP10.29□□□□□ -0.76
CPSF6-204ENST00000547486 U3KQK5 164 aa10.29□□□□□ -0.76
CPSF6-204ENST00000547486 TRBV6-7A0A0A0MS04 114 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 TRAV1-2A0A0B4J238 106 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 RAB27BO00194 218 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 BET1O15155 118 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 FABP7O15540 132 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 SLC25A17O43808 307 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 LY86O95711 162 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 IGLV2-23P01705 113 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 CRYGBP07316 175 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 FCGR3AP08637 254 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 SPNP16150 400 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 FXYD3Q14802 87 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 TBCEQ15813 527 aaPredicted RBP10.28□□□□□ -0.76
CPSF6-204ENST00000547486 IZUMO2Q6UXV1 221 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 NR2C2APQ86WQ0 139 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 PDPNQ86YL7 162 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 OR10R2Q8NGX6 335 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 FLYWCH2Q96CP2 140 aaKnown RBP10.28□□□□□ -0.76
CPSF6-204ENST00000547486 TSNAXQ99598 290 aaKnown RBP10.28□□□□□ -0.76
CPSF6-204ENST00000547486 SDHAF2Q9NX18 166 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 ELF5Q9UKW6 265 aaPredicted RBP10.28□□□□□ -0.76
CPSF6-204ENST00000547486 TENM3Q9P273 2699 aa10.28□□□□□ -0.76
CPSF6-204ENST00000547486 A0A075B6Q4 140 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 IGKV1D-8A0A087WSZ0 117 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 IFITM5A6NNB3 132 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 SRRM4A7MD48 611 aaKnown RBP10.27□□□□□ -0.77
CPSF6-204ENST00000547486 MFNGO00587 321 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 SAP30O75446 220 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 SPDEFO95238 335 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 HSPB1P04792 205 aaKnown RBP10.27□□□□□ -0.77
CPSF6-204ENST00000547486 SERPINB10P48595 397 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 TPPP2P59282 170 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 MRGPRG-AS1Q2M3A8 158 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 PYHIN1Q6K0P9 492 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 ACSM6Q6P461 480 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 ZNF367Q7RTV3 350 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.27□□□□□ -0.77
CPSF6-204ENST00000547486 OR5T1Q8NG75 326 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 GRPEL2Q8TAA5 225 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 ARPC1AQ92747 370 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 CABLES2Q9BTV7 478 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 OR2D2Q9H210 308 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 SLC35D1Q9NTN3 355 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 NDUFB11Q9NX14 153 aa10.27□□□□□ -0.77
CPSF6-204ENST00000547486 TRDV1A0A1B0GX56 115 aa10.26□□□□□ -0.77
CPSF6-204ENST00000547486 PDCD5O14737 125 aa10.26□□□□□ -0.77
CPSF6-204ENST00000547486 APOA2P02652 100 aa10.26□□□□□ -0.77
CPSF6-204ENST00000547486 TRGV3P03979 118 aa10.26□□□□□ -0.77
CPSF6-204ENST00000547486 BVESQ8NE79 360 aa10.26□□□□□ -0.77
CPSF6-204ENST00000547486 OR10J5Q8NHC4 309 aa10.26□□□□□ -0.77
CPSF6-204ENST00000547486 SMAD5-AS1Q9Y6J3 95 aa10.26□□□□□ -0.77
CPSF6-204ENST00000547486 SMIM30A4D0T7 59 aa10.25□□□□□ -0.77
CPSF6-204ENST00000547486 CNIH1O95406 144 aa10.25□□□□□ -0.77
CPSF6-204ENST00000547486 HIST1H1DP16402 221 aaKnown RBP10.25□□□□□ -0.77
CPSF6-204ENST00000547486 RAB3BP20337 219 aa10.25□□□□□ -0.77
CPSF6-204ENST00000547486 RAB6AP20340 208 aa10.25□□□□□ -0.77
CPSF6-204ENST00000547486 MRPS15P82914 257 aaKnown RBP10.25□□□□□ -0.77
CPSF6-204ENST00000547486 C22orf42Q6IC83 251 aa10.25□□□□□ -0.77
CPSF6-204ENST00000547486 HAPLN4Q86UW8 402 aa10.25□□□□□ -0.77
CPSF6-204ENST00000547486 SBSPONQ8IVN8 264 aa10.25□□□□□ -0.77
CPSF6-204ENST00000547486 VCX3BQ9H321 246 aa10.25□□□□□ -0.77
CPSF6-204ENST00000547486 SLA2Q9H6Q3 261 aa10.25□□□□□ -0.77
CPSF6-204ENST00000547486 ZNF355PQ9NSJ1 428 aa10.25□□□□□ -0.77
CPSF6-204ENST00000547486 GP9P14770 177 aa10.24□□□□□ -0.77
CPSF6-204ENST00000547486 GADD45AP24522 165 aa10.24□□□□□ -0.77
CPSF6-204ENST00000547486 CD40LGP29965 261 aa10.24□□□□□ -0.77
CPSF6-204ENST00000547486 RANBP1P43487 201 aa10.24□□□□□ -0.77
CPSF6-204ENST00000547486 LGALS7P47929 136 aa10.24□□□□□ -0.77
CPSF6-204ENST00000547486 HSPA13P48723 471 aa10.24□□□□□ -0.77
CPSF6-204ENST00000547486 TMEM177Q53S58 311 aa10.24□□□□□ -0.77
CPSF6-204ENST00000547486 OVCH2Q7RTZ1 564 aa10.24□□□□□ -0.77
CPSF6-204ENST00000547486 POC5Q8NA72 575 aa10.24□□□□□ -0.77
CPSF6-204ENST00000547486 DDB2Q92466 427 aa10.24□□□□□ -0.77
CPSF6-204ENST00000547486 ATG5Q9H1Y0 275 aa10.24□□□□□ -0.77
CPSF6-204ENST00000547486 ANKRD34BA5PLL1 514 aa10.23□□□□□ -0.77
CPSF6-204ENST00000547486 TRIM64CA6NLI5 447 aa10.23□□□□□ -0.77
CPSF6-204ENST00000547486 LINC00473A8K010 186 aa10.23□□□□□ -0.77
CPSF6-204ENST00000547486 RBMXL2O75526 392 aaKnown RBP10.23□□□□□ -0.77
CPSF6-204ENST00000547486 DIRAS3O95661 229 aa10.23□□□□□ -0.77
CPSF6-204ENST00000547486 MYL9P24844 172 aa10.23□□□□□ -0.77
CPSF6-204ENST00000547486 DEFA5Q01523 94 aa10.23□□□□□ -0.77
CPSF6-204ENST00000547486 ARFRP1Q13795 201 aa10.23□□□□□ -0.77
CPSF6-204ENST00000547486 SRSF7Q16629 238 aaKnown RBP eCLIP10.23□□□□□ -0.77
CPSF6-204ENST00000547486 CDNFQ49AH0 187 aa10.23□□□□□ -0.77
CPSF6-204ENST00000547486 Q6ZS49 121 aa10.23□□□□□ -0.77
CPSF6-204ENST00000547486 H1FOOQ8IZA3 346 aaPredicted RBP10.23□□□□□ -0.77
CPSF6-204ENST00000547486 HARBI1Q96MB7 349 aa10.23□□□□□ -0.77
CPSF6-204ENST00000547486 BLOC1S6Q9UL45 172 aa10.23□□□□□ -0.77
CPSF6-204ENST00000547486 RAB26Q9ULW5 256 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms