RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 TSPAN5P62079 268 aa13.37□□□□□ -0.27
LTBR-215ENST00000546296 CBX3Q13185 183 aa13.37□□□□□ -0.27
LTBR-215ENST00000546296 DYRK1AQ13627 763 aa13.37□□□□□ -0.27
LTBR-215ENST00000546296 OVCH2Q7RTZ1 564 aa13.37□□□□□ -0.27
LTBR-215ENST00000546296 KLHDC1Q8N7A1 406 aa13.37□□□□□ -0.27
LTBR-215ENST00000546296 Q8N9W7 124 aa13.37□□□□□ -0.27
LTBR-215ENST00000546296 ADTRPQ96IZ2 230 aa13.37□□□□□ -0.27
LTBR-215ENST00000546296 ZNF2Q9BSG1 426 aaPredicted RBP13.37□□□□□ -0.27
LTBR-215ENST00000546296 SLC5A7Q9GZV3 580 aa13.37□□□□□ -0.27
LTBR-215ENST00000546296 SLC35D1Q9NTN3 355 aa13.37□□□□□ -0.27
LTBR-215ENST00000546296 SERTAD4Q9NUC0 356 aa13.37□□□□□ -0.27
LTBR-215ENST00000546296 KIAA1456Q9P272 454 aa13.37□□□□□ -0.27
LTBR-215ENST00000546296 KLK11Q9UBX7 282 aa13.37□□□□□ -0.27
LTBR-215ENST00000546296 GABARAPH6UMI1 98 aa13.36□□□□□ -0.27
LTBR-215ENST00000546296 NBR2O15453 112 aa13.36□□□□□ -0.27
LTBR-215ENST00000546296 RPS16P62249 146 aaKnown RBP13.36□□□□□ -0.27
LTBR-215ENST00000546296 MRPS10P82664 201 aaKnown RBP13.36□□□□□ -0.27
LTBR-215ENST00000546296 TAGLNQ01995 201 aaKnown RBP13.36□□□□□ -0.27
LTBR-215ENST00000546296 RTL8BQ17RB0 113 aa13.36□□□□□ -0.27
LTBR-215ENST00000546296 TMEM95Q3KNT9 176 aa13.36□□□□□ -0.27
LTBR-215ENST00000546296 ACTBL2Q562R1 376 aa13.36□□□□□ -0.27
LTBR-215ENST00000546296 DHRS11Q6UWP2 260 aa13.36□□□□□ -0.27
LTBR-215ENST00000546296 PDPNQ86YL7 162 aa13.36□□□□□ -0.27
LTBR-215ENST00000546296 OR6F1Q8NGZ6 308 aa13.36□□□□□ -0.27
LTBR-215ENST00000546296 FLYWCH2Q96CP2 140 aaKnown RBP13.36□□□□□ -0.27
LTBR-215ENST00000546296 C5orf30Q96GV9 206 aa13.36□□□□□ -0.27
LTBR-215ENST00000546296 LIN7CQ9NUP9 197 aaKnown RBP13.36□□□□□ -0.27
LTBR-215ENST00000546296 MTFP1Q9UDX5 166 aa13.36□□□□□ -0.27
LTBR-215ENST00000546296 RBMX2Q9Y388 322 aaKnown RBP13.36□□□□□ -0.27
LTBR-215ENST00000546296 A3GALT2U3KPV4 340 aa13.36□□□□□ -0.27
LTBR-215ENST00000546296 IFNA6P05013 189 aa13.35□□□□□ -0.27
LTBR-215ENST00000546296 RRASP10301 218 aa13.35□□□□□ -0.27
LTBR-215ENST00000546296 CNTFRP26992 372 aa13.35□□□□□ -0.27
LTBR-215ENST00000546296 DUTP33316 252 aaKnown RBP13.35□□□□□ -0.27
LTBR-215ENST00000546296 DGCR2P98153 550 aa13.35□□□□□ -0.27
LTBR-215ENST00000546296 SRSF4Q08170 494 aaKnown RBP13.35□□□□□ -0.27
LTBR-215ENST00000546296 PLGLAQ15195 96 aa13.35□□□□□ -0.27
LTBR-215ENST00000546296 CENPVQ7Z7K6 275 aaPredicted RBP13.35□□□□□ -0.27
LTBR-215ENST00000546296 TMEM17Q86X19 198 aa13.35□□□□□ -0.27
LTBR-215ENST00000546296 BVESQ8NE79 360 aa13.35□□□□□ -0.27
LTBR-215ENST00000546296 RNF5Q99942 180 aa13.35□□□□□ -0.27
LTBR-215ENST00000546296 CCL28Q9NRJ3 127 aa13.35□□□□□ -0.27
LTBR-215ENST00000546296 PRELID3BQ9Y3B1 194 aa13.35□□□□□ -0.27
LTBR-215ENST00000546296 M0QYG6 137 aa13.34□□□□□ -0.27
LTBR-215ENST00000546296 IGKV1-16P04430 117 aa13.34□□□□□ -0.27
LTBR-215ENST00000546296 KRTAP10-3P60369 221 aa13.34□□□□□ -0.27
LTBR-215ENST00000546296 SLC35E3Q7Z769 313 aa13.34□□□□□ -0.27
LTBR-215ENST00000546296 FAM71E2Q8N5Q1 922 aa13.34□□□□□ -0.27
LTBR-215ENST00000546296 NPBQ8NG41 125 aa13.34□□□□□ -0.27
LTBR-215ENST00000546296 TSNAXQ99598 290 aaKnown RBP13.34□□□□□ -0.27
LTBR-215ENST00000546296 HSD17B10Q99714 261 aaKnown RBP13.34□□□□□ -0.27
LTBR-215ENST00000546296 TAS2R8Q9NYW2 309 aa13.34□□□□□ -0.27
LTBR-215ENST00000546296 DNHD1Q96M86 4753 aa13.34□□□□□ -0.27
LTBR-215ENST00000546296 ANK2Q01484 3957 aa13.33□□□□□ -0.27
LTBR-215ENST00000546296 LINC00473A8K010 186 aa13.33□□□□□ -0.28
LTBR-215ENST00000546296 CTDSPLO15194 276 aa13.33□□□□□ -0.28
LTBR-215ENST00000546296 IGLV2-14P01704 120 aa13.33□□□□□ -0.28
LTBR-215ENST00000546296 CD3DP04234 171 aa13.33□□□□□ -0.28
LTBR-215ENST00000546296 SSBP1Q04837 148 aaKnown RBP13.33□□□□□ -0.28
LTBR-215ENST00000546296 C5orf64Q2M2E5 130 aa13.33□□□□□ -0.28
LTBR-215ENST00000546296 RNASE10Q5GAN6 216 aaKnown RBP13.33□□□□□ -0.28
LTBR-215ENST00000546296 FOXB2Q5VYV0 432 aa13.33□□□□□ -0.28
LTBR-215ENST00000546296 ZNF660Q6AZW8 331 aaPredicted RBP13.33□□□□□ -0.28
LTBR-215ENST00000546296 LIN54Q6MZP7 749 aa13.33□□□□□ -0.28
LTBR-215ENST00000546296 KCTD9Q7L273 389 aa13.33□□□□□ -0.28
LTBR-215ENST00000546296 FOXRED2Q8IWF2 684 aa13.33□□□□□ -0.28
LTBR-215ENST00000546296 TMEM229BQ8NBD8 167 aa13.33□□□□□ -0.28
LTBR-215ENST00000546296 ZBTB34Q8NCN2 500 aa13.33□□□□□ -0.28
LTBR-215ENST00000546296 SMIM4Q8WVI0 70 aa13.33□□□□□ -0.28
LTBR-215ENST00000546296 TCTEX1D2Q8WW35 142 aa13.33□□□□□ -0.28
LTBR-215ENST00000546296 BORCS5Q969J3 196 aa13.33□□□□□ -0.28
LTBR-215ENST00000546296 MOB3AQ96BX8 217 aa13.33□□□□□ -0.28
LTBR-215ENST00000546296 RRHO14718 337 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 SHOXO15266 292 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 KCNAB3O43448 404 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 TNFSF12O43508 249 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 FCGR3BO75015 233 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 IGHG2P01859 326 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 TBPP20226 339 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 LGALS7P47929 136 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 TAS2R19P59542 299 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 PSG5Q15238 335 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 MSMO1Q15800 293 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 PYDC2Q56P42 97 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 OR2B11Q5JQS5 317 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 VAX1Q5SQQ9 334 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 ZNF66Q6ZN08 573 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 MFSD4AQ8N468 514 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 C11orf44Q8N8P7 122 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 CITED1Q99966 193 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 SOSTQ9BQB4 213 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 TINAGL1Q9GZM7 467 aaPredicted RBP13.32□□□□□ -0.28
LTBR-215ENST00000546296 WNT10AQ9GZT5 417 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 FBXL15Q9H469 300 aa13.32□□□□□ -0.28
LTBR-215ENST00000546296 ZNF107Q9UII5 783 aaPredicted RBP13.32□□□□□ -0.28
LTBR-215ENST00000546296 LINC01548A6NM66 108 aa13.31□□□□□ -0.28
LTBR-215ENST00000546296 NDUFA3O95167 84 aa13.31□□□□□ -0.28
LTBR-215ENST00000546296 CRYZL1O95825 349 aa13.31□□□□□ -0.28
LTBR-215ENST00000546296 CSF1P09603 554 aa13.31□□□□□ -0.28
LTBR-215ENST00000546296 RPL30P62888 115 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms