RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ZNF610Q8N9Z0 462 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 KDF1Q8NAX2 398 aaPredicted RBP11.75□□□□□ -0.53
UBE3B-210ENST00000539599 HIST1H2BHQ93079 126 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 LHX4Q969G2 390 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 HIST1H2BNQ99877 126 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 HIST1H2BMQ99879 126 aa11.75□□□□□ -0.53
UBE3B-210ENST00000539599 HBE1P02100 147 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 Q6ZT83 130 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 MOB1BQ7L9L4 216 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 OR8G5Q8NG78 346 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 EDARADDQ8WWZ3 215 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 TRAV20A0A0B4J274 112 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 PROP1O75360 226 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 ZNF737O75373 536 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 SLC25A6P12236 298 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 CD81P60033 236 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 HBG1P69891 147 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 HBG2P69892 147 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 ADIRFQ15847 76 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 NCR3LG1Q68D85 454 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 DUX4L9Q6RFH8 374 aaPredicted RBP11.74□□□□□ -0.53
UBE3B-210ENST00000539599 Q8IYB0 196 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 OR2Z1Q8NG97 314 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 MALSU1Q96EH3 234 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 ZNF292O60281 2723 aa11.74□□□□□ -0.53
UBE3B-210ENST00000539599 SOD3P08294 240 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 FGF7P21781 194 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 EIF2S3P41091 472 aaKnown RBP11.73□□□□□ -0.53
UBE3B-210ENST00000539599 TMEM14EPQ6UXP3 125 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 LRRC29Q8WV35 223 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 FRZBQ92765 325 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 GPR61Q9BZJ8 451 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 HES4Q9HCC6 221 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 LRRC30A6NM36 301 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 SMIM6P0DI80 62 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 RPL39P5Q59GN2 51 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 TMEM41BQ5BJD5 291 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 ZNRF1Q8ND25 227 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 DTD1Q8TEA8 209 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 ABHD5Q8WTS1 349 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 NINJ1Q92982 152 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 TMEM204Q9BSN7 226 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 ELOVL1Q9BW60 279 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 QTRT1Q9BXR0 403 aaKnown RBP11.73□□□□□ -0.53
UBE3B-210ENST00000539599 UNKLQ9H9P5 680 aaKnown RBP11.73□□□□□ -0.53
UBE3B-210ENST00000539599 SLC39A9Q9NUM3 307 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 CISD1Q9NZ45 108 aaKnown RBP11.73□□□□□ -0.53
UBE3B-210ENST00000539599 OR9G9P0C7N8 305 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 TUBG1P23258 451 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 HOXC12P31275 282 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 EIF4EBP1Q13541 118 aaPredicted RBP11.73□□□□□ -0.53
UBE3B-210ENST00000539599 PYY3Q5JQD4 70 aa11.73□□□□□ -0.53
UBE3B-210ENST00000539599 C1orf229Q6ZS94 237 aaPredicted RBP11.73□□□□□ -0.53
UBE3B-210ENST00000539599 PKDREJQ9NTG1 2253 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 TET2Q6N021 2002 aaPredicted RBP11.72□□□□□ -0.53
UBE3B-210ENST00000539599 TRAV3A0A0B4J244 114 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 IGHV1-18A0A0C4DH31 117 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 IGKV3-15P01624 115 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 CRYAAP02489 173 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 GGACTQ9BVM4 153 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 SMDT1Q9H4I9 107 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 HSPB7Q9UBY9 170 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 PMS2P5A8MQ11 134 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 TRGC1P0CF51 173 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 PTPRBP23467 1997 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 DEFB109BQ30KR1 87 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 FFAR4Q5NUL3 377 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 SLC35E3Q7Z769 313 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 Q8TCH9 128 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 MBD3L1Q8WWY6 194 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 TAAR6Q96RI8 345 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 ZNF251Q9BRH9 671 aa11.72□□□□□ -0.53
UBE3B-210ENST00000539599 TRAV38-1A0A0B4J264 116 aa11.71□□□□□ -0.53
UBE3B-210ENST00000539599 OOEPA6NGQ2 149 aa11.71□□□□□ -0.53
UBE3B-210ENST00000539599 FCGR3BO75015 233 aa11.71□□□□□ -0.53
UBE3B-210ENST00000539599 S100A8P05109 93 aa11.71□□□□□ -0.53
UBE3B-210ENST00000539599 P0C879 139 aa11.71□□□□□ -0.53
UBE3B-210ENST00000539599 MAS1LP35410 378 aa11.71□□□□□ -0.53
UBE3B-210ENST00000539599 ZNF83P51522 516 aa11.71□□□□□ -0.53
UBE3B-210ENST00000539599 UBE2G2P60604 165 aa11.71□□□□□ -0.53
UBE3B-210ENST00000539599 PRSS8Q16651 343 aa11.71□□□□□ -0.53
UBE3B-210ENST00000539599 H2BFWTQ7Z2G1 175 aa11.71□□□□□ -0.53
UBE3B-210ENST00000539599 FAM210BQ96KR6 192 aa11.71□□□□□ -0.53
UBE3B-210ENST00000539599 SMIM7Q9BQ49 75 aa11.71□□□□□ -0.53
UBE3B-210ENST00000539599 SDF2L1Q9HCN8 221 aa11.71□□□□□ -0.53
UBE3B-210ENST00000539599 TRAV1-1A0A0B4J248 108 aa11.71□□□□□ -0.54
UBE3B-210ENST00000539599 IGHV2OR16-5A0A0B4J2B6 119 aa11.71□□□□□ -0.54
UBE3B-210ENST00000539599 MARCH11A6NNE9 402 aa11.71□□□□□ -0.54
UBE3B-210ENST00000539599 MYOD1P15172 320 aa11.71□□□□□ -0.54
UBE3B-210ENST00000539599 ZNF134P52741 427 aa11.71□□□□□ -0.54
UBE3B-210ENST00000539599 INO80CQ6PI98 192 aaPredicted RBP11.71□□□□□ -0.54
UBE3B-210ENST00000539599 OR51G1Q8NGK1 321 aa11.71□□□□□ -0.54
UBE3B-210ENST00000539599 OR10G4Q8NGN3 311 aa11.71□□□□□ -0.54
UBE3B-210ENST00000539599 OR10G9Q8NGN4 311 aa11.71□□□□□ -0.54
UBE3B-210ENST00000539599 OR10G7Q8NGN6 311 aa11.71□□□□□ -0.54
UBE3B-210ENST00000539599 OR10D4PQ8NGN7 298 aa11.71□□□□□ -0.54
UBE3B-210ENST00000539599 SNX22Q96L94 193 aa11.71□□□□□ -0.54
UBE3B-210ENST00000539599 TNCP24821 2201 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 SMCO3A2RU48 225 aa11.7□□□□□ -0.54
UBE3B-210ENST00000539599 C1QTNF9BB2RNN3 333 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms