RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 MOSP00540 346 aa17.01■□□□□ 0.31
CAPN1-220ENST00000530567 TSPAN5P62079 268 aa17.01■□□□□ 0.31
CAPN1-220ENST00000530567 KLF9Q13886 244 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-220ENST00000530567 C16orf82Q7Z2V1 217 aa17.01■□□□□ 0.31
CAPN1-220ENST00000530567 GDPD1Q8N9F7 314 aa17.01■□□□□ 0.31
CAPN1-220ENST00000530567 OR4C16Q8NGL9 310 aa17.01■□□□□ 0.31
CAPN1-220ENST00000530567 TMEM158Q8WZ71 300 aa17.01■□□□□ 0.31
CAPN1-220ENST00000530567 DDB2Q92466 427 aa17.01■□□□□ 0.31
CAPN1-220ENST00000530567 RITA1Q96K30 269 aa17.01■□□□□ 0.31
CAPN1-220ENST00000530567 AMY1AP04745 511 aa17■□□□□ 0.31
CAPN1-220ENST00000530567 AMY2AP04746 511 aa17■□□□□ 0.31
CAPN1-220ENST00000530567 HKR1P10072 659 aa17■□□□□ 0.31
CAPN1-220ENST00000530567 GNRHRP30968 328 aa17■□□□□ 0.31
CAPN1-220ENST00000530567 RPL30P62888 115 aaKnown RBP17■□□□□ 0.31
CAPN1-220ENST00000530567 ZNF45Q02386 682 aa17■□□□□ 0.31
CAPN1-220ENST00000530567 GPHA2Q96T91 129 aa17■□□□□ 0.31
CAPN1-220ENST00000530567 PLSCR3Q9NRY6 295 aa17■□□□□ 0.31
CAPN1-220ENST00000530567 WASHC3Q9Y3C0 194 aa17■□□□□ 0.31
CAPN1-220ENST00000530567 COL6A5A8TX70 2615 aa16.99■□□□□ 0.31
CAPN1-220ENST00000530567 NDUFA7O95182 113 aa16.99■□□□□ 0.31
CAPN1-220ENST00000530567 IFNA6P05013 189 aa16.99■□□□□ 0.31
CAPN1-220ENST00000530567 AKAIN1P0CW23 69 aa16.99■□□□□ 0.31
CAPN1-220ENST00000530567 MC5RP33032 325 aa16.99■□□□□ 0.31
CAPN1-220ENST00000530567 THBS3P49746 956 aa16.99■□□□□ 0.31
CAPN1-220ENST00000530567 MEF2DQ14814 521 aa16.99■□□□□ 0.31
CAPN1-220ENST00000530567 BAK1Q16611 211 aa16.99■□□□□ 0.31
CAPN1-220ENST00000530567 ZNF818PQ6ZRF7 136 aa16.99■□□□□ 0.31
CAPN1-220ENST00000530567 Q6ZSV7 163 aa16.99■□□□□ 0.31
CAPN1-220ENST00000530567 MDFIQ99750 246 aa16.99■□□□□ 0.31
CAPN1-220ENST00000530567 MOB4Q9Y3A3 225 aa16.99■□□□□ 0.31
CAPN1-220ENST00000530567 RNF212BA8MTL3 300 aa16.98■□□□□ 0.31
CAPN1-220ENST00000530567 IGKV1-16P04430 117 aa16.98■□□□□ 0.31
CAPN1-220ENST00000530567 CRYBA1P05813 215 aa16.98■□□□□ 0.31
CAPN1-220ENST00000530567 ZBTB34Q8NCN2 500 aa16.98■□□□□ 0.31
CAPN1-220ENST00000530567 MRGPRFQ96AM1 343 aa16.98■□□□□ 0.31
CAPN1-220ENST00000530567 ADTRPQ96IZ2 230 aa16.98■□□□□ 0.31
CAPN1-220ENST00000530567 NPFFR1Q9GZQ6 430 aa16.98■□□□□ 0.31
CAPN1-220ENST00000530567 SLC35D1Q9NTN3 355 aa16.98■□□□□ 0.31
CAPN1-220ENST00000530567 TMEM89A2RUT3 159 aa16.97■□□□□ 0.31
CAPN1-220ENST00000530567 TSPAN9O75954 239 aa16.97■□□□□ 0.31
CAPN1-220ENST00000530567 F2RL1P55085 397 aa16.97■□□□□ 0.31
CAPN1-220ENST00000530567 RAG2P55895 527 aa16.97■□□□□ 0.31
CAPN1-220ENST00000530567 UCP3P55916 312 aa16.97■□□□□ 0.31
CAPN1-220ENST00000530567 BLCAPP62952 87 aa16.97■□□□□ 0.31
CAPN1-220ENST00000530567 Q6ZS46 218 aa16.97■□□□□ 0.31
CAPN1-220ENST00000530567 PDPNQ86YL7 162 aa16.97■□□□□ 0.31
CAPN1-220ENST00000530567 C5orf56Q8N8D9 126 aa16.97■□□□□ 0.31
CAPN1-220ENST00000530567 BVESQ8NE79 360 aa16.97■□□□□ 0.31
CAPN1-220ENST00000530567 AKR1E2Q96JD6 320 aa16.97■□□□□ 0.31
CAPN1-220ENST00000530567 RANBP3Q9H6Z4 567 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-220ENST00000530567 ZNF702PQ9H963 129 aa16.97■□□□□ 0.31
CAPN1-220ENST00000530567 TNFSF12O43508 249 aa16.96■□□□□ 0.31
CAPN1-220ENST00000530567 APOA2P02652 100 aa16.96■□□□□ 0.31
CAPN1-220ENST00000530567 CNTFRP26992 372 aa16.96■□□□□ 0.31
CAPN1-220ENST00000530567 C11orf88Q6PI97 169 aa16.96■□□□□ 0.31
CAPN1-220ENST00000530567 ZNF66Q6ZN08 573 aa16.96■□□□□ 0.31
CAPN1-220ENST00000530567 KCTD9Q7L273 389 aa16.96■□□□□ 0.31
CAPN1-220ENST00000530567 Q8N9W7 124 aa16.96■□□□□ 0.31
CAPN1-220ENST00000530567 HSD17B10Q99714 261 aaKnown RBP16.96■□□□□ 0.31
CAPN1-220ENST00000530567 RSRP1Q9BUV0 290 aa16.96■□□□□ 0.31
CAPN1-220ENST00000530567 SH2D7A6NKC9 451 aaPredicted RBP16.96■□□□□ 0.3
CAPN1-220ENST00000530567 H7C2Y5 167 aa16.96■□□□□ 0.3
CAPN1-220ENST00000530567 FGF16O43320 207 aa16.96■□□□□ 0.3
CAPN1-220ENST00000530567 BRWD1-AS2P59051 145 aa16.96■□□□□ 0.3
CAPN1-220ENST00000530567 Q8N2B8 174 aa16.96■□□□□ 0.3
CAPN1-220ENST00000530567 TOMM5Q8N4H5 51 aa16.96■□□□□ 0.3
CAPN1-220ENST00000530567 FAM71E2Q8N5Q1 922 aa16.96■□□□□ 0.3
CAPN1-220ENST00000530567 OR8H1Q8NGG4 311 aa16.96■□□□□ 0.3
CAPN1-220ENST00000530567 TERB2Q8NHR7 220 aa16.96■□□□□ 0.3
CAPN1-220ENST00000530567 SLC2A8Q9NY64 477 aa16.96■□□□□ 0.3
CAPN1-220ENST00000530567 M0QZK8 103 aa16.95■□□□□ 0.3
CAPN1-220ENST00000530567 PPP5CP53041 499 aa16.95■□□□□ 0.3
CAPN1-220ENST00000530567 AP3S2P59780 193 aa16.95■□□□□ 0.3
CAPN1-220ENST00000530567 TAGLNQ01995 201 aaKnown RBP16.95■□□□□ 0.3
CAPN1-220ENST00000530567 MMDQ15546 238 aa16.95■□□□□ 0.3
CAPN1-220ENST00000530567 SCGB2B2Q4G0G5 96 aa16.95■□□□□ 0.3
CAPN1-220ENST00000530567 OR4C13Q8NGP0 309 aa16.95■□□□□ 0.3
CAPN1-220ENST00000530567 OR13C8Q8NGS7 320 aa16.95■□□□□ 0.3
CAPN1-220ENST00000530567 C16orf95Q9H693 158 aa16.95■□□□□ 0.3
CAPN1-220ENST00000530567 HRASLSQ9HDD0 168 aa16.95■□□□□ 0.3
CAPN1-220ENST00000530567 DISC1C4P0D8 188 aa16.94■□□□□ 0.3
CAPN1-220ENST00000530567 GPR31O00270 319 aa16.94■□□□□ 0.3
CAPN1-220ENST00000530567 NDUFA3O95167 84 aa16.94■□□□□ 0.3
CAPN1-220ENST00000530567 IL7P13232 177 aa16.94■□□□□ 0.3
CAPN1-220ENST00000530567 RTL8BQ17RB0 113 aa16.94■□□□□ 0.3
CAPN1-220ENST00000530567 SLC38A6Q8IZM9 456 aa16.94■□□□□ 0.3
CAPN1-220ENST00000530567 NPBQ8NG41 125 aa16.94■□□□□ 0.3
CAPN1-220ENST00000530567 OR51S1Q8NGJ8 323 aa16.94■□□□□ 0.3
CAPN1-220ENST00000530567 OR4F5Q8NH21 305 aa16.94■□□□□ 0.3
CAPN1-220ENST00000530567 LINC01006Q8NI28 216 aa16.94■□□□□ 0.3
CAPN1-220ENST00000530567 TCTEX1D2Q8WW35 142 aa16.94■□□□□ 0.3
CAPN1-220ENST00000530567 S100ZQ8WXG8 99 aa16.94■□□□□ 0.3
CAPN1-220ENST00000530567 BORCS5Q969J3 196 aa16.94■□□□□ 0.3
CAPN1-220ENST00000530567 SIGLEC9Q9Y336 463 aa16.94■□□□□ 0.3
CAPN1-220ENST00000530567 NCBP2LA6PVI3 153 aaKnown RBP16.93■□□□□ 0.3
CAPN1-220ENST00000530567 NBR2O15453 112 aa16.93■□□□□ 0.3
CAPN1-220ENST00000530567 PGLYRP1O75594 196 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-220ENST00000530567 RRASP10301 218 aa16.93■□□□□ 0.3
CAPN1-220ENST00000530567 MDKP21741 143 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-220ENST00000530567 ABCA11PQ4W5N1 156 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms