RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 NPBQ8NG41 125 aa12.38□□□□□ -0.43
POLR2J3-218ENST00000513506 MDFIQ99750 246 aa12.38□□□□□ -0.43
POLR2J3-218ENST00000513506 SLC25A33Q9BSK2 321 aa12.38□□□□□ -0.43
POLR2J3-218ENST00000513506 THAP7Q9BT49 309 aaPredicted RBP12.38□□□□□ -0.43
POLR2J3-218ENST00000513506 NPFFR1Q9GZQ6 430 aa12.38□□□□□ -0.43
POLR2J3-218ENST00000513506 SRRQ9GZT4 340 aa12.38□□□□□ -0.43
POLR2J3-218ENST00000513506 M0R1X1 148 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 CRYBA1P05813 215 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 FCER2P06734 321 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 ZNF735P0CB33 412 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 RRASP10301 218 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 GNRHRP30968 328 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 MEF2DQ14814 521 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 RNASE10Q5GAN6 216 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 STEAP1BQ6NZ63 245 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 TMEM219Q86XT9 240 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 PDPNQ86YL7 162 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 Q8N402 240 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 MFSD4AQ8N468 514 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 FAM71E2Q8N5Q1 922 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 OR4F5Q8NH21 305 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 HSD17B10Q99714 261 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 ZNF2Q9BSG1 426 aaPredicted RBP12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 TINAGL1Q9GZM7 467 aaPredicted RBP12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 TNFRSF19Q9NS68 423 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 SLC2A8Q9NY64 477 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 MOB4Q9Y3A3 225 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 WASHC3Q9Y3C0 194 aa12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 RBM7Q9Y580 266 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-218ENST00000513506 IGHV3-72A0A0B4J1Y9 119 aa12.36□□□□□ -0.43
POLR2J3-218ENST00000513506 RNF212BA8MTL3 300 aa12.36□□□□□ -0.43
POLR2J3-218ENST00000513506 NDUFA3O95167 84 aa12.36□□□□□ -0.43
POLR2J3-218ENST00000513506 TMEM11P17152 192 aa12.36□□□□□ -0.43
POLR2J3-218ENST00000513506 RAG2P55895 527 aa12.36□□□□□ -0.43
POLR2J3-218ENST00000513506 LPCAT3Q6P1A2 487 aa12.36□□□□□ -0.43
POLR2J3-218ENST00000513506 TMEM17Q86X19 198 aa12.36□□□□□ -0.43
POLR2J3-218ENST00000513506 C5orf56Q8N8D9 126 aa12.36□□□□□ -0.43
POLR2J3-218ENST00000513506 TERB2Q8NHR7 220 aa12.36□□□□□ -0.43
POLR2J3-218ENST00000513506 LINC01006Q8NI28 216 aa12.36□□□□□ -0.43
POLR2J3-218ENST00000513506 SDHCQ99643 169 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-218ENST00000513506 ZNF702PQ9H963 129 aa12.36□□□□□ -0.43
POLR2J3-218ENST00000513506 AKIP1Q9NQ31 210 aa12.36□□□□□ -0.43
POLR2J3-218ENST00000513506 LINC00473A8K010 186 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 M0QYG6 137 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 RBFOX2O43251 390 aaKnown RBP eCLIP12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 RAB3DO95716 219 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 AKAIN1P0CW23 69 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 BRWD1-AS2P59051 145 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 LINC00205P59089 165 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 HERV-K104P61576 105 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 KLF9Q13886 244 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 TMEM177Q53S58 311 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 PYDC2Q56P42 97 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 Q8N9W7 124 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 DRAXINQ8NBI3 349 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 OR4D10Q8NGI6 311 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 OR4C13Q8NGP0 309 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 RSRP1Q9BUV0 290 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 PRSS22Q9GZN4 317 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 SLC5A7Q9GZV3 580 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 BEX1Q9HBH7 125 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 CCL28Q9NRJ3 127 aa12.35□□□□□ -0.43
POLR2J3-218ENST00000513506 CLPSL1A2RUU4 121 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 SPDEFO95238 335 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 APOA2P02652 100 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 IGKV1-16P04430 117 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 IFNA6P05013 189 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 LGALS7P47929 136 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 AP3S2P59780 193 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 TSPAN5P62079 268 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 RPL30P62888 115 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 BLCAPP62952 87 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 HES1Q14469 280 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 RNASE12Q5GAN4 147 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 ZNF818PQ6ZRF7 136 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 TCTEX1D1Q8N7M0 179 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 OR4C16Q8NGL9 310 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 WIPF2Q8TF74 440 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 SECTM1Q8WVN6 248 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 RITA1Q96K30 269 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 FXYD6Q9H0Q3 95 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 FAM212BQ9NTI7 297 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 LIN7CQ9NUP9 197 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 ZNF580Q9UK33 172 aa12.34□□□□□ -0.43
POLR2J3-218ENST00000513506 ECI1P42126 302 aa12.33□□□□□ -0.44
POLR2J3-218ENST00000513506 F2RL1P55085 397 aa12.33□□□□□ -0.44
POLR2J3-218ENST00000513506 PROK1P58294 105 aa12.33□□□□□ -0.44
POLR2J3-218ENST00000513506 RND3P61587 244 aa12.33□□□□□ -0.44
POLR2J3-218ENST00000513506 HNF4GQ14541 408 aa12.33□□□□□ -0.44
POLR2J3-218ENST00000513506 SURF2Q15527 256 aaPredicted RBP12.33□□□□□ -0.44
POLR2J3-218ENST00000513506 GLDNQ6ZMI3 551 aaPredicted RBP12.33□□□□□ -0.44
POLR2J3-218ENST00000513506 SLC38A6Q8IZM9 456 aa12.33□□□□□ -0.44
POLR2J3-218ENST00000513506 CADM3Q8N126 398 aa12.33□□□□□ -0.44
POLR2J3-218ENST00000513506 SPATA3Q8NHX4 192 aa12.33□□□□□ -0.44
POLR2J3-218ENST00000513506 MRGPRFQ96AM1 343 aa12.33□□□□□ -0.44
POLR2J3-218ENST00000513506 ZNF486Q96H40 463 aaPredicted RBP12.33□□□□□ -0.44
POLR2J3-218ENST00000513506 WNT10AQ9GZT5 417 aa12.33□□□□□ -0.44
POLR2J3-218ENST00000513506 SLC35D1Q9NTN3 355 aa12.33□□□□□ -0.44
POLR2J3-218ENST00000513506 SERTAD4Q9NUC0 356 aa12.33□□□□□ -0.44
POLR2J3-218ENST00000513506 PRELID3BQ9Y3B1 194 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms