RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 LY86O95711 162 aa10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 IGHV3-11P01762 117 aa10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 TFAP2AP05549 437 aa10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 FCGR3AP08637 254 aa10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 TMEM267Q0VDI3 215 aaPredicted RBP10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 SSX1Q16384 188 aa10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 UNQ5815/PRO19632Q6UWF5 114 aa10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 ARPC1AQ92747 370 aa10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 TSNAXQ99598 290 aaKnown RBP10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 ASCL2Q99929 193 aa10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 CABLES2Q9BTV7 478 aa10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 ZNF221Q9UK13 617 aa10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 SMAD5-AS1Q9Y6J3 95 aa10.03□□□□□ -0.8
HMGCS1-205ENST00000508319 TNCP24821 2201 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 M0R1X1 148 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 ARPC1BO15143 372 aaKnown RBP10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 FABP7O15540 132 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 IGLV2-23P01705 113 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 APOA2P02652 100 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 CD3GP09693 182 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 VAMP1P23763 118 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 OR10A3P58181 314 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 TPPP2P59282 170 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 RPS16P62249 146 aaKnown RBP10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 IGSF11Q5DX21 431 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 ACSM6Q6P461 480 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 OR4A4PQ8NGN8 299 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 GRPEL2Q8TAA5 225 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 C5orf30Q96GV9 206 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 MS4A10Q96PG2 267 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 SLA2Q9H6Q3 261 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 SLC35D1Q9NTN3 355 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 RAB22AQ9UL26 194 aa10.02□□□□□ -0.81
HMGCS1-205ENST00000508319 TRBV6-7A0A0A0MS04 114 aa10.01□□□□□ -0.81
HMGCS1-205ENST00000508319 RAB27BO00194 218 aa10.01□□□□□ -0.81
HMGCS1-205ENST00000508319 MFNGO00587 321 aa10.01□□□□□ -0.81
HMGCS1-205ENST00000508319 DIRAS3O95661 229 aa10.01□□□□□ -0.81
HMGCS1-205ENST00000508319 RANBP1P43487 201 aa10.01□□□□□ -0.81
HMGCS1-205ENST00000508319 SERPINB10P48595 397 aa10.01□□□□□ -0.81
HMGCS1-205ENST00000508319 PSMD7P51665 324 aa10.01□□□□□ -0.81
HMGCS1-205ENST00000508319 PJVKQ0ZLH3 352 aa10.01□□□□□ -0.81
HMGCS1-205ENST00000508319 ZNF367Q7RTV3 350 aa10.01□□□□□ -0.81
HMGCS1-205ENST00000508319 FLYWCH2Q96CP2 140 aaKnown RBP10.01□□□□□ -0.81
HMGCS1-205ENST00000508319 RAB3CQ96E17 227 aa10.01□□□□□ -0.81
HMGCS1-205ENST00000508319 RHOVQ96L33 236 aa10.01□□□□□ -0.81
HMGCS1-205ENST00000508319 OR2D2Q9H210 308 aa10.01□□□□□ -0.81
HMGCS1-205ENST00000508319 NDUFB11Q9NX14 153 aa10.01□□□□□ -0.81
HMGCS1-205ENST00000508319 SDHAF2Q9NX18 166 aa10.01□□□□□ -0.81
HMGCS1-205ENST00000508319 DYNC2H1Q8NCM8 4307 aaKnown RBP10□□□□□ -0.81
HMGCS1-205ENST00000508319 A0A0B4J203 849 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 TRAV1-2A0A0B4J238 106 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 IFITM5A6NNB3 132 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 BET1O15155 118 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 TRGV3P03979 118 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 HSPB1P04792 205 aaKnown RBP10□□□□□ -0.81
HMGCS1-205ENST00000508319 CRYGBP07316 175 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 OR8U9P0C7N5 309 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 GSTT2P0CG29 244 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 GSTT2BP0CG30 244 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 GP9P14770 177 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 SPNP16150 400 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 HIST1H1DP16402 221 aaKnown RBP10□□□□□ -0.81
HMGCS1-205ENST00000508319 GNB3P16520 340 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 FXYD3Q14802 87 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 IZUMO2Q6UXV1 221 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 POC5Q8NA72 575 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 OR10R2Q8NGX6 335 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 MAFIPQ8WZ33 124 aa10□□□□□ -0.81
HMGCS1-205ENST00000508319 ZNF230Q9UIE0 474 aaPredicted RBP10□□□□□ -0.81
HMGCS1-205ENST00000508319 H3BUA1 57 aa9.99□□□□□ -0.81
HMGCS1-205ENST00000508319 PDCD5O14737 125 aa9.99□□□□□ -0.81
HMGCS1-205ENST00000508319 RAB6AP20340 208 aa9.99□□□□□ -0.81
HMGCS1-205ENST00000508319 CD40LGP29965 261 aa9.99□□□□□ -0.81
HMGCS1-205ENST00000508319 MRPS15P82914 257 aaKnown RBP9.99□□□□□ -0.81
HMGCS1-205ENST00000508319 NR2C2APQ86WQ0 139 aa9.99□□□□□ -0.81
HMGCS1-205ENST00000508319 OR6Q1Q8NGQ2 317 aa9.99□□□□□ -0.81
HMGCS1-205ENST00000508319 OR10J5Q8NHC4 309 aa9.99□□□□□ -0.81
HMGCS1-205ENST00000508319 CNBD2Q96M20 576 aa9.99□□□□□ -0.81
HMGCS1-205ENST00000508319 HARBI1Q96MB7 349 aa9.99□□□□□ -0.81
HMGCS1-205ENST00000508319 VCX3BQ9H321 246 aa9.99□□□□□ -0.81
HMGCS1-205ENST00000508319 BLOC1S6Q9UL45 172 aa9.99□□□□□ -0.81
HMGCS1-205ENST00000508319 A0A075B6Q4 140 aa9.98□□□□□ -0.81
HMGCS1-205ENST00000508319 IGKV1D-8A0A087WSZ0 117 aa9.98□□□□□ -0.81
HMGCS1-205ENST00000508319 TRDV1A0A1B0GX56 115 aa9.98□□□□□ -0.81
HMGCS1-205ENST00000508319 TRIM64CA6NLI5 447 aa9.98□□□□□ -0.81
HMGCS1-205ENST00000508319 GADD45AP24522 165 aa9.98□□□□□ -0.81
HMGCS1-205ENST00000508319 MYL9P24844 172 aa9.98□□□□□ -0.81
HMGCS1-205ENST00000508319 LGALS7P47929 136 aa9.98□□□□□ -0.81
HMGCS1-205ENST00000508319 HSPA13P48723 471 aa9.98□□□□□ -0.81
HMGCS1-205ENST00000508319 PITPNAQ00169 270 aa9.98□□□□□ -0.81
HMGCS1-205ENST00000508319 MRGPRG-AS1Q2M3A8 158 aa9.98□□□□□ -0.81
HMGCS1-205ENST00000508319 TMEM177Q53S58 311 aa9.98□□□□□ -0.81
HMGCS1-205ENST00000508319 HAPLN4Q86UW8 402 aa9.98□□□□□ -0.81
HMGCS1-205ENST00000508319 SBSPONQ8IVN8 264 aa9.98□□□□□ -0.81
HMGCS1-205ENST00000508319 DDB2Q92466 427 aa9.98□□□□□ -0.81
HMGCS1-205ENST00000508319 SRRM4A7MD48 611 aaKnown RBP9.97□□□□□ -0.81
HMGCS1-205ENST00000508319 CNIH1O95406 144 aa9.97□□□□□ -0.81
HMGCS1-205ENST00000508319 FRMD6-AS1P0C7T7 363 aa9.97□□□□□ -0.81
HMGCS1-205ENST00000508319 RAB3BP20337 219 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms