RNA–Protein interactions for RNA: ENST00000495341.5

LMNA-215, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-215	ENST00000495341	TPPP2	P59282	170 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	SSX1	Q16384	188 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	CD200R1L	Q6Q8B3	271 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	ZNF562	Q6V9R5	426 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	LFNG	Q8NES3	379 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	GRPEL2	Q8TAA5	225 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	ARPC1A	Q92747	370 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	DLX4	Q92988	240 aa	Predicted RBP	12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	MS4A10	Q96PG2	267 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	TOLLIP	Q9H0E2	274 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	OR2D2	Q9H210	308 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	TPSG1	Q9NRR2	321 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	SLC35D1	Q9NTN3	355 aa		12.81	□□□□□ -0.36
LMNA-215	ENST00000495341	IGHV4OR15-8	A0A075B7B6	117 aa		12.8	□□□□□ -0.36
LMNA-215	ENST00000495341		A0A087WW49	117 aa		12.8	□□□□□ -0.36
LMNA-215	ENST00000495341	SLC25A17	O43808	307 aa		12.8	□□□□□ -0.36
LMNA-215	ENST00000495341	SNRPB	P14678	240 aa	Known RBP	12.8	□□□□□ -0.36
LMNA-215	ENST00000495341	GNB3	P16520	340 aa		12.8	□□□□□ -0.36
LMNA-215	ENST00000495341	SERPINB10	P48595	397 aa		12.8	□□□□□ -0.36
LMNA-215	ENST00000495341	MOGAT2	Q3SYC2	334 aa		12.8	□□□□□ -0.36
LMNA-215	ENST00000495341	AKIRIN2	Q53H80	203 aa		12.8	□□□□□ -0.36
LMNA-215	ENST00000495341	ZNF429	Q86V71	674 aa		12.8	□□□□□ -0.36
LMNA-215	ENST00000495341	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	12.8	□□□□□ -0.36
LMNA-215	ENST00000495341	OR10J5	Q8NHC4	309 aa		12.8	□□□□□ -0.36
LMNA-215	ENST00000495341	MAFIP	Q8WZ33	124 aa		12.8	□□□□□ -0.36
LMNA-215	ENST00000495341	FLYWCH2	Q96CP2	140 aa	Known RBP	12.8	□□□□□ -0.36
LMNA-215	ENST00000495341	ASCL2	Q99929	193 aa		12.8	□□□□□ -0.36
LMNA-215	ENST00000495341	RBM7	Q9Y580	266 aa	Known RBP	12.8	□□□□□ -0.36
LMNA-215	ENST00000495341	OR8U9	P0C7N5	309 aa		12.79	□□□□□ -0.36
LMNA-215	ENST00000495341	RAB3B	P20337	219 aa		12.79	□□□□□ -0.36
LMNA-215	ENST00000495341	CBX3	Q13185	183 aa		12.79	□□□□□ -0.36
LMNA-215	ENST00000495341	FXYD3	Q14802	87 aa		12.79	□□□□□ -0.36
LMNA-215	ENST00000495341	IGSF11	Q5DX21	431 aa		12.79	□□□□□ -0.36
LMNA-215	ENST00000495341	OR10R2	Q8NGX6	335 aa		12.79	□□□□□ -0.36
LMNA-215	ENST00000495341	CABLES2	Q9BTV7	478 aa		12.79	□□□□□ -0.36
LMNA-215	ENST00000495341	ZNF355P	Q9NSJ1	428 aa		12.79	□□□□□ -0.36
LMNA-215	ENST00000495341	NDUFB11	Q9NX14	153 aa		12.79	□□□□□ -0.36
LMNA-215	ENST00000495341	KCNK7	Q9Y2U2	307 aa		12.79	□□□□□ -0.36
LMNA-215	ENST00000495341		U3KQK5	164 aa		12.79	□□□□□ -0.36
LMNA-215	ENST00000495341	KMT2C	Q8NEZ4	4911 aa	Known RBP	12.78	□□□□□ -0.36
LMNA-215	ENST00000495341	TRAV1-2	A0A0B4J238	106 aa		12.78	□□□□□ -0.36
LMNA-215	ENST00000495341	SHISA3	A0PJX4	238 aa		12.78	□□□□□ -0.36
LMNA-215	ENST00000495341	IFITM5	A6NNB3	132 aa		12.78	□□□□□ -0.36
LMNA-215	ENST00000495341	CNIH1	O95406	144 aa		12.78	□□□□□ -0.36
LMNA-215	ENST00000495341	TRGV3	P03979	118 aa		12.78	□□□□□ -0.36
LMNA-215	ENST00000495341	GSTT2	P0CG29	244 aa		12.78	□□□□□ -0.36
LMNA-215	ENST00000495341	GSTT2B	P0CG30	244 aa		12.78	□□□□□ -0.36
LMNA-215	ENST00000495341	HIST1H1D	P16402	221 aa	Known RBP	12.78	□□□□□ -0.36
LMNA-215	ENST00000495341	HARBI1	Q96MB7	349 aa		12.78	□□□□□ -0.36
LMNA-215	ENST00000495341	GINS4	Q9BRT9	223 aa		12.78	□□□□□ -0.36
LMNA-215	ENST00000495341	SLA2	Q9H6Q3	261 aa		12.78	□□□□□ -0.36
LMNA-215	ENST00000495341	SDHAF2	Q9NX18	166 aa		12.78	□□□□□ -0.36
LMNA-215	ENST00000495341	ZNF230	Q9UIE0	474 aa	Predicted RBP	12.78	□□□□□ -0.36
LMNA-215	ENST00000495341	SMAD5-AS1	Q9Y6J3	95 aa		12.78	□□□□□ -0.36
LMNA-215	ENST00000495341		A0A0B4J203	849 aa		12.77	□□□□□ -0.37
LMNA-215	ENST00000495341	MFNG	O00587	321 aa		12.77	□□□□□ -0.37
LMNA-215	ENST00000495341	HSPB1	P04792	205 aa	Known RBP	12.77	□□□□□ -0.37
LMNA-215	ENST00000495341	RAB6A	P20340	208 aa		12.77	□□□□□ -0.37
LMNA-215	ENST00000495341	TALDO1	P37837	337 aa		12.77	□□□□□ -0.37
LMNA-215	ENST00000495341	PITPNA	Q00169	270 aa		12.77	□□□□□ -0.37
LMNA-215	ENST00000495341	ARFRP1	Q13795	201 aa		12.77	□□□□□ -0.37
LMNA-215	ENST00000495341	C22orf42	Q6IC83	251 aa		12.77	□□□□□ -0.37
LMNA-215	ENST00000495341	TENM3	Q9P273	2699 aa		12.77	□□□□□ -0.37
LMNA-215	ENST00000495341	TRBV6-7	A0A0A0MS04	114 aa		12.76	□□□□□ -0.37
LMNA-215	ENST00000495341	TRDV1	A0A1B0GX56	115 aa		12.76	□□□□□ -0.37
LMNA-215	ENST00000495341	SMIM30	A4D0T7	59 aa		12.76	□□□□□ -0.37
LMNA-215	ENST00000495341	METTL21EP	A6NDL7	271 aa		12.76	□□□□□ -0.37
LMNA-215	ENST00000495341	ERICH4	A6NGS2	130 aa		12.76	□□□□□ -0.37
LMNA-215	ENST00000495341	ARPC1B	O15143	372 aa	Known RBP	12.76	□□□□□ -0.37
LMNA-215	ENST00000495341	SPN	P16150	400 aa		12.76	□□□□□ -0.37
LMNA-215	ENST00000495341	LGALS7	P47929	136 aa		12.76	□□□□□ -0.37
LMNA-215	ENST00000495341	POC5	Q8NA72	575 aa		12.76	□□□□□ -0.37
LMNA-215	ENST00000495341	OR6Q1	Q8NGQ2	317 aa		12.76	□□□□□ -0.37
LMNA-215	ENST00000495341	RHOV	Q96L33	236 aa		12.76	□□□□□ -0.37
LMNA-215	ENST00000495341	ATG5	Q9H1Y0	275 aa		12.76	□□□□□ -0.37
LMNA-215	ENST00000495341	RAB26	Q9ULW5	256 aa		12.76	□□□□□ -0.37
LMNA-215	ENST00000495341	NBEAL2	Q6ZNJ1	2754 aa		12.75	□□□□□ -0.37
LMNA-215	ENST00000495341	C13orf42	A0A1B0GVH6	325 aa		12.75	□□□□□ -0.37
LMNA-215	ENST00000495341	RAB27B	O00194	218 aa		12.75	□□□□□ -0.37
LMNA-215	ENST00000495341	SHOX	O15266	292 aa		12.75	□□□□□ -0.37
LMNA-215	ENST00000495341	DIRAS3	O95661	229 aa		12.75	□□□□□ -0.37
LMNA-215	ENST00000495341	IGLV2-23	P01705	113 aa		12.75	□□□□□ -0.37
LMNA-215	ENST00000495341	PJVK	Q0ZLH3	352 aa		12.75	□□□□□ -0.37
LMNA-215	ENST00000495341	RTL8B	Q17RB0	113 aa		12.75	□□□□□ -0.37
LMNA-215	ENST00000495341	ACSM6	Q6P461	480 aa		12.75	□□□□□ -0.37
LMNA-215	ENST00000495341	BVES	Q8NE79	360 aa		12.75	□□□□□ -0.37
LMNA-215	ENST00000495341	OR5T1	Q8NG75	326 aa		12.75	□□□□□ -0.37
LMNA-215	ENST00000495341	C5orf30	Q96GV9	206 aa		12.75	□□□□□ -0.37
LMNA-215	ENST00000495341	OR4C12	Q96R67	309 aa		12.75	□□□□□ -0.37
LMNA-215	ENST00000495341		H3BUA1	57 aa		12.74	□□□□□ -0.37
LMNA-215	ENST00000495341	GP9	P14770	177 aa		12.74	□□□□□ -0.37
LMNA-215	ENST00000495341	PSMB9	P28065	219 aa		12.74	□□□□□ -0.37
LMNA-215	ENST00000495341	GABARAPL2	P60520	117 aa		12.74	□□□□□ -0.37
LMNA-215	ENST00000495341	TAGLN	Q01995	201 aa	Known RBP	12.74	□□□□□ -0.37
LMNA-215	ENST00000495341	PHB2	Q99623	299 aa		12.74	□□□□□ -0.37
LMNA-215	ENST00000495341	RSRP1	Q9BUV0	290 aa		12.74	□□□□□ -0.37
LMNA-215	ENST00000495341	RRAS	P10301	218 aa		12.73	□□□□□ -0.37
LMNA-215	ENST00000495341	GAL	P22466	123 aa		12.73	□□□□□ -0.37
LMNA-215	ENST00000495341	SSBP2	P81877	361 aa	Predicted RBP	12.73	□□□□□ -0.37
LMNA-215	ENST00000495341	TMEM177	Q53S58	311 aa		12.73	□□□□□ -0.37

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