RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 MFSD2BA6NFX1 497 aa13.45□□□□□ -0.26
CBX4-204ENST00000495122 FAM90A9PA6NNJ1 464 aa13.45□□□□□ -0.26
CBX4-204ENST00000495122 E7EQL1 145 aa13.45□□□□□ -0.26
CBX4-204ENST00000495122 RBFOX2O43251 390 aaKnown RBP eCLIP13.45□□□□□ -0.262e-7■■■■□ 20.3
CBX4-204ENST00000495122 SCAF4O95104 1147 aaKnown RBP13.45□□□□□ -0.26
CBX4-204ENST00000495122 PPP1CCP36873 323 aaKnown RBP13.45□□□□□ -0.26
CBX4-204ENST00000495122 AKR1C2P52895 323 aa13.45□□□□□ -0.26
CBX4-204ENST00000495122 ZNF266Q14584 549 aa13.45□□□□□ -0.26
CBX4-204ENST00000495122 AANATQ16613 207 aa13.45□□□□□ -0.26
CBX4-204ENST00000495122 MORN2Q502X0 79 aa13.45□□□□□ -0.26
CBX4-204ENST00000495122 ZNF585BQ52M93 769 aa13.45□□□□□ -0.26
CBX4-204ENST00000495122 Q71RC1 249 aaPredicted RBP13.45□□□□□ -0.26
CBX4-204ENST00000495122 GPR146Q96CH1 333 aa13.45□□□□□ -0.26
CBX4-204ENST00000495122 AGMATQ9BSE5 352 aa13.45□□□□□ -0.26
CBX4-204ENST00000495122 DYNLRB1Q9NP97 96 aa13.45□□□□□ -0.26
CBX4-204ENST00000495122 SDHAF2Q9NX18 166 aa13.45□□□□□ -0.26
CBX4-204ENST00000495122 GNG12Q9UBI6 72 aa13.45□□□□□ -0.26
CBX4-204ENST00000495122 CLN8Q9UBY8 286 aa13.45□□□□□ -0.26
CBX4-204ENST00000495122 ARFGEF3Q5TH69 2177 aa13.45□□□□□ -0.26
CBX4-204ENST00000495122 PPIAL4EA0A075B759 164 aa13.44□□□□□ -0.26
CBX4-204ENST00000495122 hADV38S2A0JD32 116 aa13.44□□□□□ -0.26
CBX4-204ENST00000495122 PPIAL4DF5H284 164 aa13.44□□□□□ -0.26
CBX4-204ENST00000495122 TMEM178BH3BS89 294 aa13.44□□□□□ -0.26
CBX4-204ENST00000495122 MED6O75586 246 aa13.44□□□□□ -0.26
CBX4-204ENST00000495122 CYB5R3P00387 301 aaPredicted RBP13.44□□□□□ -0.26
CBX4-204ENST00000495122 PPIAL4FP0DN26 164 aa13.44□□□□□ -0.26
CBX4-204ENST00000495122 EDDM3BP56851 147 aa13.44□□□□□ -0.26
CBX4-204ENST00000495122 RPL23AP62750 156 aaKnown RBP13.44□□□□□ -0.26
CBX4-204ENST00000495122 ZNRF1Q8ND25 227 aa13.44□□□□□ -0.26
CBX4-204ENST00000495122 PARP12Q9H0J9 701 aaKnown RBP13.44□□□□□ -0.26
CBX4-204ENST00000495122 GFOD1Q9NXC2 390 aa13.44□□□□□ -0.26
CBX4-204ENST00000495122 PPIAL4AQ9Y536 164 aa13.44□□□□□ -0.26
CBX4-204ENST00000495122 LINC00312Q9Y6C7 94 aa13.44□□□□□ -0.26
CBX4-204ENST00000495122 WSB1Q9Y6I7 421 aa13.44□□□□□ -0.26
CBX4-204ENST00000495122 DNHD1Q96M86 4753 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 RAB19A4D1S5 217 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 KRBOX1C9JBD0 128 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 TOR1AO14656 332 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 LY6G6DO95868 133 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 IGKV1-39P01597 117 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 IGKV1D-39P04432 117 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 FGF2P09038 288 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 SEC11BP0C7V7 166 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 LPAR6P43657 344 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 GPR12P47775 334 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 LOXL3P58215 753 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 BLOC1S1P78537 153 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 CCL8P80075 99 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 EWSR1Q01844 656 aaKnown RBP eCLIP13.43□□□□□ -0.261e-6■■■■□ 20.5
CBX4-204ENST00000495122 UQCC3Q6UW78 93 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 ADTRPQ96IZ2 230 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 REG4Q9BYZ8 158 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 GAL3ST2Q9H3Q3 398 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 TMEM106BQ9NUM4 274 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 KAAG1Q9UBP8 84 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 TANC2Q9HCD6 1990 aa13.43□□□□□ -0.26
CBX4-204ENST00000495122 CSPG4Q6UVK1 2322 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 A8MXK9 166 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 RAB29O14966 203 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 TFF1P04155 84 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 P0C879 139 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 PPOXP50336 477 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 RAB5CP51148 216 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 SWI5Q1ZZU3 235 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 TOR2AQ5JU69 321 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 RPL7L1Q6DKI1 246 aaKnown RBP13.42□□□□□ -0.26
CBX4-204ENST00000495122 TPRX1Q8N7U7 411 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 UBALD1Q8TB05 177 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 TCTEX1D2Q8WW35 142 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 NEUROG1Q92886 237 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 RAB39BQ96DA2 213 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 CXorf58Q96LI9 332 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 GINS3Q9BRX5 216 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 BARX1Q9HBU1 254 aaPredicted RBP13.42□□□□□ -0.26
CBX4-204ENST00000495122 IDI2-AS1Q9NZ38 188 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 PSG11Q9UQ72 335 aa13.42□□□□□ -0.26
CBX4-204ENST00000495122 DYSFO75923 2080 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 ABCA2Q9BZC7 2435 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 ABCA1O95477 2261 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 TEX46H3BTG2 121 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 I3L521 148 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 OVOL3O00110 214 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 SMAD7O15105 426 aaKnown RBP13.41□□□□□ -0.26
CBX4-204ENST00000495122 KCNAB3O43448 404 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 SSSCA1O60232 199 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 IGKV1-5P01602 117 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 DANCRP0C864 163 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 ZNF16P17020 682 aaPredicted RBP13.41□□□□□ -0.26
CBX4-204ENST00000495122 ZP3P21754 424 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 SULT1A2P50226 295 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 POLR2GP62487 172 aaKnown RBP eCLIP13.41□□□□□ -0.26
CBX4-204ENST00000495122 C17orf58Q2M2W7 97 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 ZNF672Q499Z4 452 aaPredicted RBP13.41□□□□□ -0.26
CBX4-204ENST00000495122 MIDNQ504T8 468 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 CXorf66Q5JRM2 361 aaPredicted RBP13.41□□□□□ -0.26
CBX4-204ENST00000495122 IL34Q6ZMJ4 242 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 STX12Q86Y82 276 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 SPAG16Q8N0X2 631 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 STPG2Q8N412 459 aa13.41□□□□□ -0.26
CBX4-204ENST00000495122 FGFRL1Q8N441 504 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms