RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 C12orf4Q9NQ89 552 aa7.45□□□□□ -1.22
MSH5-218ENST00000494646 METTL1Q9UBP6 276 aaKnown RBP7.45□□□□□ -1.22
MSH5-218ENST00000494646 ELF5Q9UKW6 265 aaPredicted RBP7.45□□□□□ -1.22
MSH5-218ENST00000494646 RAB26Q9ULW5 256 aa7.45□□□□□ -1.22
MSH5-218ENST00000494646 TRAV1-2A0A0B4J238 106 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 TRDV1A0A1B0GX56 115 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 IFITM5A6NNB3 132 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 PRSS47A8MTI9 375 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 M0R1X1 148 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 FABP7O15540 132 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 RAMP3O60896 148 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 CA2P00918 260 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 IGHV3-11P01762 117 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 IGKV1-16P04430 117 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 TFAP2AP05549 437 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 RAB3BP20337 219 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 MYL9P24844 172 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 HSPA13P48723 471 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 SLURP1P55000 103 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 ZNF616Q08AN1 781 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 TMEM267Q0VDI3 215 aaPredicted RBP7.44□□□□□ -1.22
MSH5-218ENST00000494646 FHL3Q13643 280 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 ARFRP1Q13795 201 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 TBCEQ15813 527 aaPredicted RBP7.44□□□□□ -1.22
MSH5-218ENST00000494646 ACTBL2Q562R1 376 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 ASPHD1Q5U4P2 390 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 UNQ5815/PRO19632Q6UWF5 114 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 OR5T1Q8NG75 326 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 OR4A4PQ8NGN8 299 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 DCUN1D4Q92564 292 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 RNF5Q99942 180 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 B9D2Q9BPU9 175 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 ATG5Q9H1Y0 275 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 ZFAND3Q9H8U3 227 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 TPSG1Q9NRR2 321 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 SLC35D1Q9NTN3 355 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 ZMAT5Q9UDW3 170 aaKnown RBP7.44□□□□□ -1.22
MSH5-218ENST00000494646 ZNF580Q9UK33 172 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 BLOC1S6Q9UL45 172 aa7.44□□□□□ -1.22
MSH5-218ENST00000494646 FOXA2Q9Y261 457 aaPredicted RBP7.44□□□□□ -1.22
MSH5-218ENST00000494646 RBM7Q9Y580 266 aaKnown RBP7.44□□□□□ -1.22
MSH5-218ENST00000494646 DYNC2H1Q8NCM8 4307 aaKnown RBP7.43□□□□□ -1.22
MSH5-218ENST00000494646 IGKV1D-8A0A087WSZ0 117 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 RAB27BO00194 218 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 OVOL1O14753 267 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 SLC25A17O43808 307 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 RBBP9O75884 186 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 LY86O95711 162 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 APOA2P02652 100 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 FCGR3AP08637 254 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 GADD45AP24522 165 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 TALDO1P37837 337 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 RANBP1P43487 201 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 RUNX1Q01196 453 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 PJVKQ0ZLH3 352 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 FXYD3Q14802 87 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 AKIRIN2Q53H80 203 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 C19orf54Q5BKX5 351 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 ZNF562Q6V9R5 426 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 NR2C2APQ86WQ0 139 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 SPARTQ8N0X7 666 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 BVESQ8NE79 360 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 OR10J5Q8NHC4 309 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 DLX4Q92988 240 aaPredicted RBP7.43□□□□□ -1.22
MSH5-218ENST00000494646 FLYWCH2Q96CP2 140 aaKnown RBP7.43□□□□□ -1.22
MSH5-218ENST00000494646 TSNAXQ99598 290 aaKnown RBP7.43□□□□□ -1.22
MSH5-218ENST00000494646 ASCL2Q99929 193 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 TOLLIPQ9H0E2 274 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 OR2D2Q9H210 308 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 ZNF355PQ9NSJ1 428 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 NDUFB11Q9NX14 153 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 SDHAF2Q9NX18 166 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 LSM4Q9Y4Z0 139 aaKnown RBP7.43□□□□□ -1.22
MSH5-218ENST00000494646 SACSQ9NZJ4 4579 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 TNCP24821 2201 aa7.43□□□□□ -1.22
MSH5-218ENST00000494646 NBEAL2Q6ZNJ1 2754 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 IGHV4OR15-8A0A075B7B6 117 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 A0A087WW49 117 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 TRBV6-7A0A0A0MS04 114 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 METTL21EPA6NDL7 271 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 LINC01619G3V211 115 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 MFNGO00587 321 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 ARPC1BO15143 372 aaKnown RBP7.42□□□□□ -1.22
MSH5-218ENST00000494646 CNIH1O95406 144 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 ATP6V1G2O95670 118 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 OR8U8P0C7N1 319 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 RAB6AP20340 208 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 PSMB9P28065 219 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 SERPINB10P48595 397 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 TPPP2P59282 170 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 CDNFQ49AH0 187 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 CD200R1LQ6Q8B3 271 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 PDPNQ86YL7 162 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 TCTEX1D1Q8N7M0 179 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 GRPEL2Q8TAA5 225 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 C5orf30Q96GV9 206 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 ST6GALNAC5Q9BVH7 336 aa7.42□□□□□ -1.22
MSH5-218ENST00000494646 TXNL4BQ9NX01 149 aaKnown RBP7.42□□□□□ -1.22
MSH5-218ENST00000494646 SRRM4A7MD48 611 aaKnown RBP7.41□□□□□ -1.22
MSH5-218ENST00000494646 SHOXO15266 292 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms