RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 AKR1C8PQ5T2L2 129 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 TMEM78Q5T7P6 136 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 STPG1Q5TH74 334 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 HAGHLQ6PII5 290 aaPredicted RBP3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 ATRAIDQ6UW56 229 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 FAM19A1Q7Z5A9 133 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 C17orf82Q86X59 251 aaPredicted RBP3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 ZNF383Q8NA42 475 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 GATD1Q8NB37 220 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 TMEM229BQ8NBD8 167 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 UBAC2Q8NBM4 344 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 RELL2Q8NC24 303 aaPredicted RBP3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 MDS2Q8NDY4 140 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 BEST4Q8NFU0 473 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 OR4K17Q8NGC6 315 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 OR51S1Q8NGJ8 323 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 OR4C13Q8NGP0 309 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 OR4C3Q8NH37 302 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 SPATA3Q8NHX4 192 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 ZNF502Q8TBZ5 544 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 SLC37A2Q8TED4 501 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 TCTEX1D2Q8WW35 142 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 CMBLQ96DG6 245 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 PHYHIPLQ96FC7 376 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 Q96M85 177 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 P2RX4Q99571 388 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 NKX3-1Q99801 234 aaPredicted RBP3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 FOXC2Q99958 501 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 MAP1LC3BQ9GZQ8 125 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 TMEM126AQ9H061 195 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 MS4A6AQ9H2W1 248 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 ZDHHC11Q9H8X9 412 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 ELL3Q9HB65 397 aaPredicted RBP3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 ACKR4Q9NPB9 350 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 KCNJ16Q9NPI9 418 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 PRTFDC1Q9NRG1 225 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 CA10Q9NS85 328 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 MED11Q9P086 117 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 PSG8Q9UQ74 426 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 LAMP3Q9UQV4 416 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 UNC79Q9P2D8 2635 aa3.34□□□□□ -1.88
PRPF38B-205ENST00000485810 LRP4O75096 1905 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 DOCK9Q9BZ29 2069 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 TRAV36DV7A0A075B6V5 113 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 IGKV3D-11A0A0A0MRZ8 115 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 IGLV1-36A0A0B4J1U3 117 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 A0A0D9SG52 128 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 SPTY2D1-AS1A0A0U1RR47 76 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 NKX2-6A6NCS4 301 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 OR5B21A6NL26 309 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 LYRM9A8MSI8 78 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 MPTX1A8MV57 137 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 A8MVM7 634 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 IDSB3KWA1 339 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 F5H5P2 479 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 CCL24O00175 119 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 MFNGO00587 321 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 HCRTR1O43613 425 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 SRSF10O75494 262 aaKnown RBP3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 APOA2P02652 100 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 APOHP02749 345 aaPredicted RBP3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 CD2P06729 351 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 UBBP0CG47 229 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 CD99P14209 185 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 PVRP15151 417 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 MUC1P15941 1255 aaPredicted RBP3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 KRTAP5-9P26371 169 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 PRSS3P35030 304 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 SSR4P51571 173 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 XGP55808 180 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 H2BFSP57053 126 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 FBXW4P57775 412 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 TAS2R19P59542 299 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 RPS27AP62979 156 aaKnown RBP3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 UBA52P62987 128 aaKnown RBP3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 PSG4Q00888 419 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 FMODQ06828 376 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 RPL18Q07020 188 aaKnown RBP3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 CD226Q15762 336 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 LTC4SQ16873 150 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 MESTQ5EB52 335 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 C1orf195Q5TG92 126 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 GLT8D1Q68CQ7 371 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 ZNF660Q6AZW8 331 aaPredicted RBP3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 SLC18B1Q6NT16 456 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 C11orf87Q6NUJ2 197 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 SPSB3Q6PJ21 355 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 OPN5Q6U736 354 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 PARM1Q6UWI2 310 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 GSG1LQ6UXU4 331 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 Q6ZSR6 202 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 TMUB2Q71RG4 321 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 PDZD9Q8IXQ8 264 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 KCNRGQ8N5I3 272 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 C12orf45Q8N5I9 185 aaPredicted RBP3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 ZNF433Q8N7K0 673 aaPredicted RBP3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 C15orf54Q8N8G6 183 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 ZNF441Q8N8Z8 693 aa3.33□□□□□ -1.88
PRPF38B-205ENST00000485810 LRTM2Q8N967 370 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms