RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TRGV3P03979 118 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 CRYGBP07316 175 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 FRMD6-AS1P0C7T7 363 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 GSTT2P0CG29 244 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 GSTT2BP0CG30 244 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 GP9P14770 177 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 DEFA5Q01523 94 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 FXYD3Q14802 87 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 MRGPRG-AS1Q2M3A8 158 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 TCTEX1D1Q8N7M0 179 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 GRPEL2Q8TAA5 225 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 MAFIPQ8WZ33 124 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 MGLLQ99685 303 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 VCXQ9H320 206 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 GHITMQ9H3K2 345 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 TPRKBQ9Y3C4 175 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 V9GY05 133 aa13.83□□□□□ -0.2
ATG4B-221ENST00000483778 A0A0B4J203 849 aa13.82□□□□□ -0.2
ATG4B-221ENST00000483778 SRRM4A7MD48 611 aaKnown RBP13.82□□□□□ -0.2
ATG4B-221ENST00000483778 DENRO43583 198 aaKnown RBP13.82□□□□□ -0.2
ATG4B-221ENST00000483778 TFAP2AP05549 437 aa13.82□□□□□ -0.2
ATG4B-221ENST00000483778 OR8U9P0C7N5 309 aa13.82□□□□□ -0.2
ATG4B-221ENST00000483778 CRHBPP24387 322 aa13.82□□□□□ -0.2
ATG4B-221ENST00000483778 OR10A3P58181 314 aa13.82□□□□□ -0.2
ATG4B-221ENST00000483778 MLLT11Q13015 90 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-221ENST00000483778 TSNAXQ99598 290 aaKnown RBP13.82□□□□□ -0.2
ATG4B-221ENST00000483778 CCDC90BQ9GZT6 254 aa13.82□□□□□ -0.2
ATG4B-221ENST00000483778 ZNF230Q9UIE0 474 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-221ENST00000483778 ANKRD34BA5PLL1 514 aa13.81□□□□□ -0.2
ATG4B-221ENST00000483778 BET1O15155 118 aa13.81□□□□□ -0.2
ATG4B-221ENST00000483778 RBMXL2O75526 392 aaKnown RBP13.81□□□□□ -0.2
ATG4B-221ENST00000483778 ARL6IP5O75915 188 aa13.81□□□□□ -0.2
ATG4B-221ENST00000483778 SSX1Q16384 188 aa13.81□□□□□ -0.2
ATG4B-221ENST00000483778 Q8N1Y9 231 aa13.81□□□□□ -0.2
ATG4B-221ENST00000483778 OR56B1Q8NGI3 324 aa13.81□□□□□ -0.2
ATG4B-221ENST00000483778 FLYWCH2Q96CP2 140 aaKnown RBP13.81□□□□□ -0.2
ATG4B-221ENST00000483778 RCHY1Q96PM5 261 aa13.81□□□□□ -0.2
ATG4B-221ENST00000483778 ZNF355PQ9NSJ1 428 aa13.81□□□□□ -0.2
ATG4B-221ENST00000483778 SLC35D1Q9NTN3 355 aa13.81□□□□□ -0.2
ATG4B-221ENST00000483778 SDHAF2Q9NX18 166 aa13.81□□□□□ -0.2
ATG4B-221ENST00000483778 ADAM30Q9UKF2 790 aa13.81□□□□□ -0.2
ATG4B-221ENST00000483778 ELF5Q9UKW6 265 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-221ENST00000483778 RAB22AQ9UL26 194 aa13.81□□□□□ -0.2
ATG4B-221ENST00000483778 MGAT4AQ9UM21 535 aa13.81□□□□□ -0.2
ATG4B-221ENST00000483778 IGKV1D-8A0A087WSZ0 117 aa13.8□□□□□ -0.2
ATG4B-221ENST00000483778 FABP7O15540 132 aa13.8□□□□□ -0.2
ATG4B-221ENST00000483778 FCGR3AP08637 254 aa13.8□□□□□ -0.2
ATG4B-221ENST00000483778 GNB3P16520 340 aa13.8□□□□□ -0.2
ATG4B-221ENST00000483778 TRAM1Q15629 374 aa13.8□□□□□ -0.2
ATG4B-221ENST00000483778 SRSF7Q16629 238 aaKnown RBP eCLIP13.8□□□□□ -0.2
ATG4B-221ENST00000483778 PYHIN1Q6K0P9 492 aa13.8□□□□□ -0.2
ATG4B-221ENST00000483778 PDPNQ86YL7 162 aa13.8□□□□□ -0.2
ATG4B-221ENST00000483778 OR4A4PQ8NGN8 299 aa13.8□□□□□ -0.2
ATG4B-221ENST00000483778 GAR1Q9NY12 217 aaKnown RBP13.8□□□□□ -0.2
ATG4B-221ENST00000483778 SPDEFO95238 335 aa13.79□□□□□ -0.2
ATG4B-221ENST00000483778 APELAP0DMC3 54 aa13.79□□□□□ -0.2
ATG4B-221ENST00000483778 PITPNAQ00169 270 aa13.79□□□□□ -0.2
ATG4B-221ENST00000483778 IL34Q6ZMJ4 242 aa13.79□□□□□ -0.2
ATG4B-221ENST00000483778 PRSS48Q7RTY5 328 aa13.79□□□□□ -0.2
ATG4B-221ENST00000483778 NR2C2APQ86WQ0 139 aa13.79□□□□□ -0.2
ATG4B-221ENST00000483778 BVESQ8NE79 360 aa13.79□□□□□ -0.2
ATG4B-221ENST00000483778 RAB3CQ96E17 227 aa13.79□□□□□ -0.2
ATG4B-221ENST00000483778 OR4C12Q96R67 309 aa13.79□□□□□ -0.2
ATG4B-221ENST00000483778 OR2D2Q9H210 308 aa13.79□□□□□ -0.2
ATG4B-221ENST00000483778 DNAH7Q8WXX0 4024 aa13.79□□□□□ -0.2
ATG4B-221ENST00000483778 A0A075B6Q4 140 aa13.78□□□□□ -0.2
ATG4B-221ENST00000483778 TRBV6-7A0A0A0MS04 114 aa13.78□□□□□ -0.2
ATG4B-221ENST00000483778 C3orf84H3BNL1 204 aa13.78□□□□□ -0.2
ATG4B-221ENST00000483778 RAB27BO00194 218 aa13.78□□□□□ -0.2
ATG4B-221ENST00000483778 CNIH1O95406 144 aa13.78□□□□□ -0.2
ATG4B-221ENST00000483778 TRBV12-3P01733 135 aa13.78□□□□□ -0.2
ATG4B-221ENST00000483778 APOA2P02652 100 aa13.78□□□□□ -0.2
ATG4B-221ENST00000483778 POC5Q8NA72 575 aa13.78□□□□□ -0.2
ATG4B-221ENST00000483778 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.78□□□□□ -0.2
ATG4B-221ENST00000483778 OR6Q1Q8NGQ2 317 aa13.78□□□□□ -0.2
ATG4B-221ENST00000483778 OR10R2Q8NGX6 335 aa13.78□□□□□ -0.2
ATG4B-221ENST00000483778 CABLES2Q9BTV7 478 aa13.78□□□□□ -0.2
ATG4B-221ENST00000483778 SLA2Q9H6Q3 261 aa13.78□□□□□ -0.2
ATG4B-221ENST00000483778 ACOT13Q9NPJ3 140 aa13.78□□□□□ -0.2
ATG4B-221ENST00000483778 MFNGO00587 321 aa13.77□□□□□ -0.21
ATG4B-221ENST00000483778 IGLV1-51P01701 117 aa13.77□□□□□ -0.21
ATG4B-221ENST00000483778 PSMA1P25786 263 aaKnown RBP13.77□□□□□ -0.21
ATG4B-221ENST00000483778 KLF5Q13887 457 aaPredicted RBP13.77□□□□□ -0.21
ATG4B-221ENST00000483778 CASC10Q5T4H9 136 aa13.77□□□□□ -0.21
ATG4B-221ENST00000483778 MUC7Q8TAX7 377 aa13.77□□□□□ -0.21
ATG4B-221ENST00000483778 C13orf42A0A1B0GVH6 325 aa13.76□□□□□ -0.21
ATG4B-221ENST00000483778 SMIM30A4D0T7 59 aa13.76□□□□□ -0.21
ATG4B-221ENST00000483778 LINC00473A8K010 186 aa13.76□□□□□ -0.21
ATG4B-221ENST00000483778 LGALS7P47929 136 aa13.76□□□□□ -0.21
ATG4B-221ENST00000483778 TMEM177Q53S58 311 aa13.76□□□□□ -0.21
ATG4B-221ENST00000483778 OR10J5Q8NHC4 309 aa13.76□□□□□ -0.21
ATG4B-221ENST00000483778 RSRP1Q9BUV0 290 aa13.76□□□□□ -0.21
ATG4B-221ENST00000483778 TRAV1-2A0A0B4J238 106 aa13.75□□□□□ -0.21
ATG4B-221ENST00000483778 MSGN1A6NI15 193 aa13.75□□□□□ -0.21
ATG4B-221ENST00000483778 IFITM5A6NNB3 132 aa13.75□□□□□ -0.21
ATG4B-221ENST00000483778 J3QRK9 145 aa13.75□□□□□ -0.21
ATG4B-221ENST00000483778 IGHV4-30-4P0DP06 118 aa13.75□□□□□ -0.21
ATG4B-221ENST00000483778 HIST1H1DP16402 221 aaKnown RBP13.75□□□□□ -0.21
ATG4B-221ENST00000483778 CD40LGP29965 261 aa13.75□□□□□ -0.21
ATG4B-221ENST00000483778 SERPINB10P48595 397 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms