RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 ARL6IP5O75915 188 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 IGHV3-11P01762 117 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 IFNA6P05013 189 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 AADACP22760 399 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 LGALS7P47929 136 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 MECP2P51608 486 aaKnown RBP10.16□□□□□ -0.78
ABCF1-206ENST00000479542 TAGLNQ01995 201 aaKnown RBP10.16□□□□□ -0.78
ABCF1-206ENST00000479542 SSX1Q16384 188 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 HAGHQ16775 308 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 TATDN3Q17R31 274 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 RPL39P5Q59GN2 51 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 IL34Q6ZMJ4 242 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 ZNF367Q7RTV3 350 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 C6orf201Q7Z4U5 140 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 C5orf24Q7Z6I8 188 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 FAM89BQ8N5H3 189 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 POC5Q8NA72 575 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.16□□□□□ -0.78
ABCF1-206ENST00000479542 OR6M1Q8NGM8 313 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 OR9G4Q8NGQ1 327 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 OR2K2Q8NGT1 345 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 IL1F10Q8WWZ1 152 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 USMG5Q96IX5 58 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 TMEM59Q9BXS4 323 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 HSF4Q9ULV5 492 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 AK6Q9Y3D8 172 aaKnown RBP10.16□□□□□ -0.78
ABCF1-206ENST00000479542 BIRC6Q9NR09 4857 aa10.16□□□□□ -0.78
ABCF1-206ENST00000479542 TNCP24821 2201 aa10.15□□□□□ -0.78
ABCF1-206ENST00000479542 C13orf42A0A1B0GVH6 325 aa10.15□□□□□ -0.78
ABCF1-206ENST00000479542 H7C2Y5 167 aa10.15□□□□□ -0.78
ABCF1-206ENST00000479542 SLC17A2O00624 439 aa10.15□□□□□ -0.78
ABCF1-206ENST00000479542 CA2P00918 260 aa10.15□□□□□ -0.78
ABCF1-206ENST00000479542 TRGV3P03979 118 aa10.15□□□□□ -0.78
ABCF1-206ENST00000479542 CALRP27797 417 aaKnown RBP10.15□□□□□ -0.78
ABCF1-206ENST00000479542 GABARAPL2P60520 117 aa10.15□□□□□ -0.78
ABCF1-206ENST00000479542 FXYD3Q14802 87 aa10.15□□□□□ -0.78
ABCF1-206ENST00000479542 P2RY14Q15391 338 aa10.15□□□□□ -0.78
ABCF1-206ENST00000479542 ZNF343Q6P1L6 599 aa10.15□□□□□ -0.78
ABCF1-206ENST00000479542 LINC00322Q6ZN03 302 aaPredicted RBP10.15□□□□□ -0.78
ABCF1-206ENST00000479542 ABHD5Q8WTS1 349 aa10.15□□□□□ -0.78
ABCF1-206ENST00000479542 MS4A10Q96PG2 267 aa10.15□□□□□ -0.78
ABCF1-206ENST00000479542 NICN1Q9BSH3 213 aa10.15□□□□□ -0.78
ABCF1-206ENST00000479542 C11orf54Q9H0W9 315 aaPredicted RBP10.15□□□□□ -0.78
ABCF1-206ENST00000479542 PLGRKTQ9HBL7 147 aa10.15□□□□□ -0.78
ABCF1-206ENST00000479542 PLEKHJ1Q9NW61 149 aa10.15□□□□□ -0.78
ABCF1-206ENST00000479542 A0A0A6YYD4 124 aa10.14□□□□□ -0.79
ABCF1-206ENST00000479542 DENRO43583 198 aaKnown RBP10.14□□□□□ -0.79
ABCF1-206ENST00000479542 AIREO43918 545 aa10.14□□□□□ -0.79
ABCF1-206ENST00000479542 DIRAS3O95661 229 aa10.14□□□□□ -0.79
ABCF1-206ENST00000479542 IGKV1-16P04430 117 aa10.14□□□□□ -0.79
ABCF1-206ENST00000479542 CRYGBP07316 175 aa10.14□□□□□ -0.79
ABCF1-206ENST00000479542 CEACAM6P40199 344 aa10.14□□□□□ -0.79
ABCF1-206ENST00000479542 RANBP1P43487 201 aa10.14□□□□□ -0.79
ABCF1-206ENST00000479542 RPS16P62249 146 aaKnown RBP10.14□□□□□ -0.79
ABCF1-206ENST00000479542 ZFAND6Q6FIF0 208 aa10.14□□□□□ -0.79
ABCF1-206ENST00000479542 LCN12Q6JVE5 192 aa10.14□□□□□ -0.79
ABCF1-206ENST00000479542 GLDNQ6ZMI3 551 aaPredicted RBP10.14□□□□□ -0.79
ABCF1-206ENST00000479542 LAX1Q8IWV1 398 aa10.14□□□□□ -0.79
ABCF1-206ENST00000479542 Q8N402 240 aa10.14□□□□□ -0.79
ABCF1-206ENST00000479542 CASTOR1Q8WTX7 329 aa10.14□□□□□ -0.79
ABCF1-206ENST00000479542 ABHD14BQ96IU4 210 aa10.14□□□□□ -0.79
ABCF1-206ENST00000479542 FAM103A1Q9BTL3 118 aaKnown RBP10.14□□□□□ -0.79
ABCF1-206ENST00000479542 LPAR5Q9H1C0 372 aa10.14□□□□□ -0.79
ABCF1-206ENST00000479542 A3GALT2U3KPV4 340 aa10.14□□□□□ -0.79
ABCF1-206ENST00000479542 MRPS14O60783 128 aaKnown RBP10.13□□□□□ -0.79
ABCF1-206ENST00000479542 APOA2P02652 100 aa10.13□□□□□ -0.79
ABCF1-206ENST00000479542 ARSBP15848 533 aa10.13□□□□□ -0.79
ABCF1-206ENST00000479542 SERPINB10P48595 397 aa10.13□□□□□ -0.79
ABCF1-206ENST00000479542 RAB11BQ15907 218 aa10.13□□□□□ -0.79
ABCF1-206ENST00000479542 GTSCR1Q86UQ5 136 aa10.13□□□□□ -0.79
ABCF1-206ENST00000479542 ZNF383Q8NA42 475 aa10.13□□□□□ -0.79
ABCF1-206ENST00000479542 URM1Q9BTM9 101 aaKnown RBP10.13□□□□□ -0.79
ABCF1-206ENST00000479542 TINAGL1Q9GZM7 467 aaPredicted RBP10.13□□□□□ -0.79
ABCF1-206ENST00000479542 Q9H521 79 aa10.13□□□□□ -0.79
ABCF1-206ENST00000479542 Q9N2K0 584 aa10.13□□□□□ -0.79
ABCF1-206ENST00000479542 NDUFB11Q9NX14 153 aa10.13□□□□□ -0.79
ABCF1-206ENST00000479542 PEF1Q9UBV8 284 aaKnown RBP10.13□□□□□ -0.79
ABCF1-206ENST00000479542 ZNF221Q9UK13 617 aa10.13□□□□□ -0.79
ABCF1-206ENST00000479542 FOXI3A8MTJ6 420 aaPredicted RBP10.12□□□□□ -0.79
ABCF1-206ENST00000479542 SOCS1O15524 211 aa10.12□□□□□ -0.79
ABCF1-206ENST00000479542 JTBO76095 146 aa10.12□□□□□ -0.79
ABCF1-206ENST00000479542 OR2A4O95047 310 aa10.12□□□□□ -0.79
ABCF1-206ENST00000479542 CSN3P07498 182 aa10.12□□□□□ -0.79
ABCF1-206ENST00000479542 CLDN12P56749 244 aa10.12□□□□□ -0.79
ABCF1-206ENST00000479542 HLA-DRB3P79483 266 aa10.12□□□□□ -0.79
ABCF1-206ENST00000479542 SSBP2P81877 361 aaPredicted RBP10.12□□□□□ -0.79
ABCF1-206ENST00000479542 FAM209BQ5JX69 171 aa10.12□□□□□ -0.79
ABCF1-206ENST00000479542 UBE2UQ5VVX9 321 aa10.12□□□□□ -0.79
ABCF1-206ENST00000479542 SPARTQ8N0X7 666 aa10.12□□□□□ -0.79
ABCF1-206ENST00000479542 CLCC1Q96S66 551 aa10.12□□□□□ -0.79
ABCF1-206ENST00000479542 RSRP1Q9BUV0 290 aa10.12□□□□□ -0.79
ABCF1-206ENST00000479542 PARP12Q9H0J9 701 aaKnown RBP10.12□□□□□ -0.79
ABCF1-206ENST00000479542 TUBA4BQ9H853 241 aa10.12□□□□□ -0.79
ABCF1-206ENST00000479542 CHMP1AQ9HD42 196 aaPredicted RBP10.12□□□□□ -0.79
ABCF1-206ENST00000479542 GAR1Q9NY12 217 aaKnown RBP10.12□□□□□ -0.79
ABCF1-206ENST00000479542 V9GY05 133 aa10.12□□□□□ -0.79
ABCF1-206ENST00000479542 TRAV1-2A0A0B4J238 106 aa10.11□□□□□ -0.79
ABCF1-206ENST00000479542 TRDV1A0A1B0GX56 115 aa10.11□□□□□ -0.79
ABCF1-206ENST00000479542 SHISA3A0PJX4 238 aa10.11□□□□□ -0.79
ABCF1-206ENST00000479542 IGLV2-23P01705 113 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms