RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 WASHC3Q9Y3C0 194 aa5.62□□□□□ -1.51
BRCA1-214ENST00000477152 SORL1Q92673 2214 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 G3V318 75 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 H3BNX3 289 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 BAG2O95816 211 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 APOA2P02652 100 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 TFAP2AP05549 437 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 RCC1P18754 421 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-214ENST00000477152 ZBTB25P24278 435 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 PPP1CCP36873 323 aaKnown RBP5.61□□□□□ -1.51
BRCA1-214ENST00000477152 VHLP40337 213 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 TPPP2P59282 170 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 MRPS15P82914 257 aaKnown RBP5.61□□□□□ -1.51
BRCA1-214ENST00000477152 ACSM6Q6P461 480 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 UNQ5815/PRO19632Q6UWF5 114 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 PPP1R27Q86WC6 154 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 OR52L2PQ8NGH6 319 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 SETD6Q8TBK2 473 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 IL1F10Q8WWZ1 152 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 OR5B12Q96R08 314 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 MRPL20Q9BYC9 149 aaKnown RBP5.61□□□□□ -1.51
BRCA1-214ENST00000477152 TOLLIPQ9H0E2 274 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 S100A14Q9HCY8 104 aa5.61□□□□□ -1.51
BRCA1-214ENST00000477152 CNOT2Q9NZN8 540 aaKnown RBP5.61□□□□□ -1.51
BRCA1-214ENST00000477152 SAA2-SAA4A0A096LPE2 208 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 TRBV5-7A0A0A0MS05 114 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 A0A1W2PP11 408 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 FRMD6-AS1P0C7T7 363 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 SAA2P0DJI9 122 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-214ENST00000477152 SPNP16150 400 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 AADACP22760 399 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 FAM3BP58499 235 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-214ENST00000477152 GNB1P62873 340 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 HMGN3Q15651 99 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 ZNF562Q6V9R5 426 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 GTSCR1Q86UQ5 136 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 DHRSXQ8N5I4 330 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 PACRGLQ8N7B6 248 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 MRPL30Q8TCC3 161 aaKnown RBP5.6□□□□□ -1.51
BRCA1-214ENST00000477152 APH1BQ8WW43 257 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 CYGBQ8WWM9 190 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 PHYHIPQ92561 330 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 DLX4Q92988 240 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-214ENST00000477152 KRTAP4-12Q9BQ66 201 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 TMEM59Q9BXS4 323 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 KLK15Q9H2R5 256 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 ZNF355PQ9NSJ1 428 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 PLEKHJ1Q9NW61 149 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 NKX1-2Q9UD57 310 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-214ENST00000477152 TRAV8-7A0A075B6U6 113 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 CNIH1O95406 144 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 CELP19835 753 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 SERPINB10P48595 397 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 WNT4P56705 351 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 CX3CL1P78423 397 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 ST3GAL4Q11206 333 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 XAF1Q6GPH4 301 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 FAM131AQ6UXB0 335 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 PDPNQ86YL7 162 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 SBSPONQ8IVN8 264 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 DERL3Q96Q80 235 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 VCXQ9H320 206 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 METTL1Q9UBP6 276 aaKnown RBP5.6□□□□□ -1.51
BRCA1-214ENST00000477152 NUBP2Q9Y5Y2 271 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 A3GALT2U3KPV4 340 aa5.6□□□□□ -1.51
BRCA1-214ENST00000477152 COL7A1Q02388 2944 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 A0A1W2PPK0 400 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 A8MZ25 164 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 CREBL2O60519 120 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-214ENST00000477152 WBP4O75554 376 aaKnown RBP5.59□□□□□ -1.51
BRCA1-214ENST00000477152 TRGV3P03979 118 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 RRASP10301 218 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 MAP2K4P45985 399 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 LGALS7P47929 136 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 TPBGQ13641 420 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 KIAA0141Q14154 515 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-214ENST00000477152 SRSF7Q16629 238 aaKnown RBP eCLIP5.59□□□□□ -1.51
BRCA1-214ENST00000477152 FAM90A2PQ658T7 463 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 LCN12Q6JVE5 192 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 C8orf59Q8N0T1 100 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-214ENST00000477152 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-214ENST00000477152 OR13C5Q8NGS8 318 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 ARPC1AQ92747 370 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 FAM46BQ96A09 425 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 PGLYRP3Q96LB9 341 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 MND1Q9BWT6 205 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 FBXL15Q9H469 300 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 TUBA4BQ9H853 241 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 ZNF581Q9P0T4 197 aa5.59□□□□□ -1.51
BRCA1-214ENST00000477152 IGHV4OR15-8A0A075B7B6 117 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 A0A087WW49 117 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 A0A0B4J203 849 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 JTBO76095 146 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 HTR2CP28335 458 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 CEACAM6P40199 344 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 OR3A3P47888 321 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 PSMD7P51665 324 aa5.58□□□□□ -1.52
BRCA1-214ENST00000477152 RPS11P62280 158 aaKnown RBP eCLIP5.58□□□□□ -1.52
BRCA1-214ENST00000477152 RPS27AP62979 156 aaKnown RBP5.58□□□□□ -1.52
BRCA1-214ENST00000477152 GNMTQ14749 295 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms