RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 PDCD5O14737 125 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 NBR2O15453 112 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 CTAG2O75638 210 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 DHRS3O75911 302 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 IGF1P05019 195 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 CCL2P13500 99 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 PRKACAP17612 351 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 SRMP19623 302 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 MYL9P24844 172 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 UCP1P25874 307 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 CD1BP29016 333 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 BMI1P35226 326 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 SAA4P35542 130 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 RANBP1P43487 201 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 ZNF83P51522 516 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 ARHGDIBP52566 201 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 ATP1B3P54709 279 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 VBP1P61758 197 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 PPP1CBP62140 327 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 RPS23P62266 143 aaKnown RBP3.64□□□□□ -1.83
CCDC39-202ENST00000471307 LSM3P62310 102 aaKnown RBP3.64□□□□□ -1.83
CCDC39-202ENST00000471307 FAM3AP98173 230 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 ZNF92Q03936 586 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 RIPPLY1Q0D2K3 151 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 HSD17B12Q53GQ0 312 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 GLYATL3Q5SZD4 288 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 C22orf42Q6IC83 251 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 FBXW12Q6X9E4 464 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 PGAP1Q75T13 922 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 FTMTQ8N4E7 242 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 SPERTQ8NA61 448 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 OR4F17Q8NGA8 305 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 OR51A4Q8NGJ6 313 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 PP6455Q8WZ26 134 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 RGP1Q92546 391 aaPredicted RBP3.64□□□□□ -1.83
CCDC39-202ENST00000471307 TMEM106AQ96A25 262 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 FGGYQ96C11 551 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 REEP6Q96HR9 211 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 DERL3Q96Q80 235 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 OR4F4Q96R69 305 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 NAA50Q9GZZ1 169 aaKnown RBP3.64□□□□□ -1.83
CCDC39-202ENST00000471307 DNTTIP1Q9H147 329 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 CKLFQ9UBR5 152 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 V9GYS6 101 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 ABCA4P78363 2273 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 ROS1P08922 2347 aa3.64□□□□□ -1.83
CCDC39-202ENST00000471307 USP9XQ93008 2570 aaPredicted RBP3.63□□□□□ -1.83
CCDC39-202ENST00000471307 UBR5O95071 2799 aaPredicted RBP3.63□□□□□ -1.83
CCDC39-202ENST00000471307 SMG1Q96Q15 3661 aaKnown RBP3.63□□□□□ -1.83
CCDC39-202ENST00000471307 DOPEY1Q5JWR5 2465 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 ZNF816-ZNF321PA0A0X1KG74 233 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 C5orf63A6NC05 138 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 DPRXA6NFQ7 191 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 GGT3PA6NGU5 568 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 CD300LBA8K4G0 201 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 PIN1P1O15428 100 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 CDRT1O95170 752 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 CST4P01036 141 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 ALDOBP05062 364 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 ERCC1P07992 297 aaPredicted RBP3.63□□□□□ -1.83
CCDC39-202ENST00000471307 CD37P11049 281 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 ZNF250P15622 560 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 IGFBP3P17936 291 aaPredicted RBP3.63□□□□□ -1.83
CCDC39-202ENST00000471307 RAB3BP20337 219 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 CALCRP30988 508 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 SDC2P34741 201 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 GLRXP35754 106 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 SERPINB10P48595 397 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 RAB9AP51151 201 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 RORCP51449 518 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 NCS1P62166 190 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 INSL4Q14641 139 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 SPCS2Q15005 226 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 OR8B8Q15620 311 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 MOGQ16653 247 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 DGUOKQ16854 277 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 BEX5Q5H9J7 111 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 CLVS2Q5SYC1 327 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 NCMAPQ5T1S8 102 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 FAM27D1Q5T7N8 215 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 TMEM42Q69YG0 159 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 MRPL21Q7Z2W9 205 aaKnown RBP3.63□□□□□ -1.83
CCDC39-202ENST00000471307 ZNF101Q8IZC7 436 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 C15orf54Q8N8G6 183 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 OR10AC1Q8NH08 325 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 OR2AE1Q8NHA4 323 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 LINC01560Q8TB33 94 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 DYNC2LI1Q8TCX1 351 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 KLF14Q8TD94 323 aaPredicted RBP3.63□□□□□ -1.83
CCDC39-202ENST00000471307 SLC25A46Q96AG3 418 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 CMBLQ96DG6 245 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 TECTBQ96PL2 329 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 CLCC1Q96S66 551 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 C20orf24Q9BUV8 137 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 SLC22A4Q9H015 551 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 DCSTAMPQ9H295 470 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 TPK1Q9H3S4 243 aa3.63□□□□□ -1.83
CCDC39-202ENST00000471307 GEMIN7Q9H840 131 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms