RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 APELAP0DMC3 54 aa10.87□□□□□ -0.67
SMC1A-204ENST00000463684 FOLR2P14207 255 aa10.87□□□□□ -0.67
SMC1A-204ENST00000463684 RPS11P62280 158 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMC1A-204ENST00000463684 ATP5G2Q06055 141 aa10.87□□□□□ -0.67
SMC1A-204ENST00000463684 ZNF880Q6PDB4 577 aa10.87□□□□□ -0.67
SMC1A-204ENST00000463684 MOB1BQ7L9L4 216 aa10.87□□□□□ -0.67
SMC1A-204ENST00000463684 NKAIN3Q8N8D7 197 aa10.87□□□□□ -0.67
SMC1A-204ENST00000463684 WDR89Q96FK6 387 aaPredicted RBP10.87□□□□□ -0.67
SMC1A-204ENST00000463684 UQCC2Q9BRT2 126 aa10.87□□□□□ -0.67
SMC1A-204ENST00000463684 ZC4H2Q9NQZ6 224 aa10.87□□□□□ -0.67
SMC1A-204ENST00000463684 SLC35D1Q9NTN3 355 aa10.87□□□□□ -0.67
SMC1A-204ENST00000463684 OR1A1Q9P1Q5 309 aa10.87□□□□□ -0.67
SMC1A-204ENST00000463684 FAM223BA6NKX1 122 aa10.86□□□□□ -0.67
SMC1A-204ENST00000463684 MPPED1O15442 326 aa10.86□□□□□ -0.67
SMC1A-204ENST00000463684 NAPSAO96009 420 aa10.86□□□□□ -0.67
SMC1A-204ENST00000463684 IGLV2-23P01705 113 aa10.86□□□□□ -0.67
SMC1A-204ENST00000463684 OR9G9P0C7N8 305 aa10.86□□□□□ -0.67
SMC1A-204ENST00000463684 UBBP0CG47 229 aa10.86□□□□□ -0.67
SMC1A-204ENST00000463684 MYL12AP19105 171 aa10.86□□□□□ -0.67
SMC1A-204ENST00000463684 RHOGP84095 191 aa10.86□□□□□ -0.67
SMC1A-204ENST00000463684 TNFRSF9Q07011 255 aa10.86□□□□□ -0.67
SMC1A-204ENST00000463684 CBX3Q13185 183 aa10.86□□□□□ -0.67
SMC1A-204ENST00000463684 EXOSC2Q13868 293 aaKnown RBP10.86□□□□□ -0.67
SMC1A-204ENST00000463684 FAM223AQ8IWN6 122 aa10.86□□□□□ -0.67
SMC1A-204ENST00000463684 ADAD2Q8NCV1 583 aaKnown RBP10.86□□□□□ -0.67
SMC1A-204ENST00000463684 PTX4Q96A99 478 aa10.86□□□□□ -0.67
SMC1A-204ENST00000463684 SLC29A1Q99808 456 aa10.86□□□□□ -0.67
SMC1A-204ENST00000463684 RIMS4Q9H426 269 aaPredicted RBP10.86□□□□□ -0.67
SMC1A-204ENST00000463684 AKIP1Q9NQ31 210 aa10.86□□□□□ -0.67
SMC1A-204ENST00000463684 PLEKHJ1Q9NW61 149 aa10.86□□□□□ -0.67
SMC1A-204ENST00000463684 C2orf70A6NJV1 201 aa10.85□□□□□ -0.67
SMC1A-204ENST00000463684 M0R1X1 148 aa10.85□□□□□ -0.67
SMC1A-204ENST00000463684 DYNC1I1O14576 645 aa10.85□□□□□ -0.67
SMC1A-204ENST00000463684 RBMXL2O75526 392 aaKnown RBP10.85□□□□□ -0.67
SMC1A-204ENST00000463684 DEDDO75618 318 aa10.85□□□□□ -0.67
SMC1A-204ENST00000463684 LALBAP00709 142 aa10.85□□□□□ -0.67
SMC1A-204ENST00000463684 CRYGBP07316 175 aa10.85□□□□□ -0.67
SMC1A-204ENST00000463684 RASSF2P50749 326 aa10.85□□□□□ -0.67
SMC1A-204ENST00000463684 FAM209BQ5JX69 171 aa10.85□□□□□ -0.67
SMC1A-204ENST00000463684 CBR4Q8N4T8 237 aa10.85□□□□□ -0.67
SMC1A-204ENST00000463684 ZFP41Q8N8Y5 198 aa10.85□□□□□ -0.67
SMC1A-204ENST00000463684 OR52B4Q8NGK2 314 aa10.85□□□□□ -0.67
SMC1A-204ENST00000463684 HARBI1Q96MB7 349 aa10.85□□□□□ -0.67
SMC1A-204ENST00000463684 ZNF230Q9UIE0 474 aaPredicted RBP10.85□□□□□ -0.67
SMC1A-204ENST00000463684 MGAT4AQ9UM21 535 aa10.85□□□□□ -0.67
SMC1A-204ENST00000463684 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.84□□□□□ -0.67
SMC1A-204ENST00000463684 LOC100130705A0A1B0GUX0 176 aa10.84□□□□□ -0.67
SMC1A-204ENST00000463684 IRGMA1A4Y4 181 aa10.84□□□□□ -0.67
SMC1A-204ENST00000463684 SHOXO15266 292 aa10.84□□□□□ -0.67
SMC1A-204ENST00000463684 HTR2CP28335 458 aa10.84□□□□□ -0.67
SMC1A-204ENST00000463684 RPS27AP62979 156 aaKnown RBP10.84□□□□□ -0.67
SMC1A-204ENST00000463684 MED21Q13503 144 aa10.84□□□□□ -0.67
SMC1A-204ENST00000463684 ANKRD55Q3KP44 614 aa10.84□□□□□ -0.67
SMC1A-204ENST00000463684 LGALS9CQ6DKI2 356 aa10.84□□□□□ -0.67
SMC1A-204ENST00000463684 LYG2Q86SG7 212 aa10.84□□□□□ -0.67
SMC1A-204ENST00000463684 WFDC3Q8IUB2 231 aa10.84□□□□□ -0.67
SMC1A-204ENST00000463684 GATAD1Q8WUU5 269 aa10.84□□□□□ -0.67
SMC1A-204ENST00000463684 APH1BQ8WW43 257 aa10.84□□□□□ -0.67
SMC1A-204ENST00000463684 PYDC1Q8WXC3 89 aa10.84□□□□□ -0.67
SMC1A-204ENST00000463684 PGLYRP3Q96LB9 341 aa10.84□□□□□ -0.67
SMC1A-204ENST00000463684 DERL3Q96Q80 235 aa10.84□□□□□ -0.67
SMC1A-204ENST00000463684 TMEM59Q9BXS4 323 aa10.84□□□□□ -0.67
SMC1A-204ENST00000463684 EXOSC1Q9Y3B2 195 aaKnown RBP10.84□□□□□ -0.67
SMC1A-204ENST00000463684 TRBV6-6A0A0A6YYG2 114 aa10.83□□□□□ -0.68
SMC1A-204ENST00000463684 SPRY2O43597 315 aa10.83□□□□□ -0.68
SMC1A-204ENST00000463684 GGCTO75223 188 aaKnown RBP10.83□□□□□ -0.68
SMC1A-204ENST00000463684 CIB2O75838 187 aa10.83□□□□□ -0.68
SMC1A-204ENST00000463684 PRH1P02810 166 aa10.83□□□□□ -0.68
SMC1A-204ENST00000463684 BMI1P35226 326 aa10.83□□□□□ -0.68
SMC1A-204ENST00000463684 MAP2K4P45985 399 aa10.83□□□□□ -0.68
SMC1A-204ENST00000463684 HLA-DRB3P79483 266 aa10.83□□□□□ -0.68
SMC1A-204ENST00000463684 EWSR1Q01844 656 aaKnown RBP eCLIP10.83□□□□□ -0.68
SMC1A-204ENST00000463684 TAGLNQ01995 201 aaKnown RBP10.83□□□□□ -0.68
SMC1A-204ENST00000463684 TNXAQ16473 311 aa10.83□□□□□ -0.68
SMC1A-204ENST00000463684 SMN1Q16637 294 aaKnown RBP10.83□□□□□ -0.68
SMC1A-204ENST00000463684 ZNF57Q68EA5 555 aaPredicted RBP10.83□□□□□ -0.68
SMC1A-204ENST00000463684 OR10K2Q6IF99 312 aa10.83□□□□□ -0.68
SMC1A-204ENST00000463684 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.83□□□□□ -0.68
SMC1A-204ENST00000463684 KCNG3Q8TAE7 436 aa10.83□□□□□ -0.68
SMC1A-204ENST00000463684 CLEC2DQ9UHP7 191 aa10.83□□□□□ -0.68
SMC1A-204ENST00000463684 TP53TG1Q9Y2A0 90 aa10.83□□□□□ -0.68
SMC1A-204ENST00000463684 KMT2AQ03164 3969 aa10.83□□□□□ -0.68
SMC1A-204ENST00000463684 TRBV9A0A0B4J1U6 114 aa10.82□□□□□ -0.68
SMC1A-204ENST00000463684 PNMA8CA0A1B0GUJ8 204 aa10.82□□□□□ -0.68
SMC1A-204ENST00000463684 LGALS9O00182 355 aa10.82□□□□□ -0.68
SMC1A-204ENST00000463684 OR2C1O95371 312 aa10.82□□□□□ -0.68
SMC1A-204ENST00000463684 SCTP09683 121 aa10.82□□□□□ -0.68
SMC1A-204ENST00000463684 ATF4P18848 351 aaPredicted RBP10.82□□□□□ -0.68
SMC1A-204ENST00000463684 EDN2P20800 178 aa10.82□□□□□ -0.68
SMC1A-204ENST00000463684 CBLN1P23435 193 aa10.82□□□□□ -0.68
SMC1A-204ENST00000463684 VMA21Q3ZAQ7 101 aa10.82□□□□□ -0.68
SMC1A-204ENST00000463684 Q6ZWC4 215 aa10.82□□□□□ -0.68
SMC1A-204ENST00000463684 TMEM217Q8N7C4 229 aa10.82□□□□□ -0.68
SMC1A-204ENST00000463684 TEX45Q8NA69 505 aa10.82□□□□□ -0.68
SMC1A-204ENST00000463684 NECAP1Q8NC96 275 aa10.82□□□□□ -0.68
SMC1A-204ENST00000463684 NICN1Q9BSH3 213 aa10.82□□□□□ -0.68
SMC1A-204ENST00000463684 DIMT1Q9UNQ2 313 aaKnown RBP10.82□□□□□ -0.68
SMC1A-204ENST00000463684 SELENOKQ9Y6D0 94 aa10.82□□□□□ -0.68
SMC1A-204ENST00000463684 SRRM4A7MD48 611 aaKnown RBP10.81□□□□□ -0.68
SMC1A-204ENST00000463684 PPP5D1E7EU14 171 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms