RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 GABRA6Q16445 453 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 PHLDA2Q53GA4 152 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 TMEM240Q5SV17 173 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 EBLN2Q6P2I7 272 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 BRICD5Q6PL45 260 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 FAM19A2Q8N3H0 131 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 ZNF525Q8N782 197 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 LSM10Q969L4 123 aaKnown RBP7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 NUS1Q96E22 293 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 PERPQ96FX8 193 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 ZC2HC1AQ96GY0 325 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 RAB40CQ96S21 281 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 SCRT2Q9NQ03 307 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 SPCS1Q9Y6A9 102 aa7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 SNRNP200O75643 2136 aaKnown RBP7.52□□□□□ -1.21
CDC42BPA-206ENST00000429440 A0A0G2JLM5 398 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 C3orf85A0A1B0GTC6 90 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 OR4C46A6NHA9 309 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 C11orf94C9JXX5 98 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 TNFSF12O43508 249 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 PRNPP04156 253 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 PF4V1P10720 104 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 MEF2CQ06413 473 aaPredicted RBP7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 RPL18Q07020 188 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 TMEM97Q5BJF2 176 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 NMSQ5H8A3 153 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 FAM57BQ71RH2 274 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 ZNF695Q8IW36 515 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 ZNF501Q96CX3 271 aaPredicted RBP7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 COX14Q96I36 57 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 HARBI1Q96MB7 349 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 QTRT1Q9BXR0 403 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 MS4A5Q9H3V2 200 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 NAT8BQ9UHF3 227 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 IGLV1-36A0A0B4J1U3 117 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 A0A1W2PP11 408 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 A0A1W2PPM0 123 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 PRR33A8MZF0 331 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 H3BMH7 237 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 H3BUT2 72 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 PAGE4O60829 102 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 IFI6P09912 130 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 PNMTP11086 282 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 SLC25A6P12236 298 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 NTF3P20783 257 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 PTGDSP41222 190 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 GPR1P46091 355 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 OR3A4PP47883 348 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 TGFBR3Q03167 851 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 EIF3IQ13347 325 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 RNPS1Q15287 305 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 SPATA31B1PQ5VZV4 182 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 OR5AS1Q8N127 324 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 RNF133Q8WVZ7 376 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 BADQ92934 168 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 TMEM45BQ96B21 275 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 TXNDC17Q9BRA2 123 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 TMEM70Q9BUB7 260 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 NXT1Q9UKK6 140 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 PLAGL1Q9UM63 463 aa7.51□□□□□ -1.21
CDC42BPA-206ENST00000429440 C5orf67F2Z3F1 127 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 SIVA1O15304 175 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 PSG2P11465 335 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 USF1P22415 310 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 GATA3P23771 443 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 HTR1DP28221 377 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 P2RY2P41231 377 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 CLDN17P56750 224 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 GNB1P62873 340 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 HBG1P69891 147 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 HBG2P69892 147 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 TMEM52BQ4KMG9 183 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 ZNF585BQ52M93 769 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 OR10X1Q8NGY0 326 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 CT55Q8WUE5 264 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 ST6GALNAC6Q969X2 333 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 S1PR5Q9H228 398 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 YAE1D1Q9NRH1 226 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 KCNIP2Q9NS61 270 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 MCTS1Q9ULC4 181 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 ZNF835Q9Y2P0 537 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 USP34Q70CQ2 3546 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 A0A087X0K7 114 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 A0A1W2PPV9 198 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 PRSS37A4D1T9 235 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 ZNF850A8MQ14 1090 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 HLA-DQA1P01909 254 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 GLI4P10075 376 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 FBLP22087 321 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 SRSF6Q13247 344 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 ZNF562Q6V9R5 426 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 TMEM136Q6ZRR5 245 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 ZAR1Q86SH2 424 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 OR52E5Q8NH55 327 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 CYYR1Q96J86 154 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 RAB1BQ9H0U4 201 aa7.5□□□□□ -1.21
CDC42BPA-206ENST00000429440 PIGBOS1A0A0B4J2F0 54 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 HSBP1O75506 76 aa7.49□□□□□ -1.21
CDC42BPA-206ENST00000429440 NKX2-2O95096 273 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 246.1 ms