RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 MOGAT2Q3SYC2 334 aa13.17□□□□□ -0.3
TRIM39-209ENST00000428728 AKIRIN2Q53H80 203 aa13.17□□□□□ -0.3
TRIM39-209ENST00000428728 ACSM6Q6P461 480 aa13.17□□□□□ -0.3
TRIM39-209ENST00000428728 ZNF562Q6V9R5 426 aa13.17□□□□□ -0.3
TRIM39-209ENST00000428728 PRSS48Q7RTY5 328 aa13.17□□□□□ -0.3
TRIM39-209ENST00000428728 OR4A4PQ8NGN8 299 aa13.17□□□□□ -0.3
TRIM39-209ENST00000428728 MAFIPQ8WZ33 124 aa13.17□□□□□ -0.3
TRIM39-209ENST00000428728 OR2D2Q9H210 308 aa13.17□□□□□ -0.3
TRIM39-209ENST00000428728 ZNF355PQ9NSJ1 428 aa13.17□□□□□ -0.3
TRIM39-209ENST00000428728 NBEAL2Q6ZNJ1 2754 aa13.17□□□□□ -0.3
TRIM39-209ENST00000428728 A0A075B6Q4 140 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 ARPC1BO15143 372 aaKnown RBP13.16□□□□□ -0.3
TRIM39-209ENST00000428728 LDLRAD4O15165 306 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 FABP7O15540 132 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 HSPB1P04792 205 aaKnown RBP13.16□□□□□ -0.3
TRIM39-209ENST00000428728 FCGR3AP08637 254 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 OR8U9P0C7N5 309 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 GP9P14770 177 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 OR10A3P58181 314 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 FXYD3Q14802 87 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 IGSF11Q5DX21 431 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 OVCH2Q7RTZ1 564 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 HAPLN4Q86UW8 402 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 OR6Q1Q8NGQ2 317 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 FLYWCH2Q96CP2 140 aaKnown RBP13.16□□□□□ -0.3
TRIM39-209ENST00000428728 RAB3CQ96E17 227 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 ACOT13Q9NPJ3 140 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 RAB22AQ9UL26 194 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 KCNK7Q9Y2U2 307 aa13.16□□□□□ -0.3
TRIM39-209ENST00000428728 CNIH1O95406 144 aa13.15□□□□□ -0.3
TRIM39-209ENST00000428728 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.15□□□□□ -0.3
TRIM39-209ENST00000428728 HARBI1Q96MB7 349 aa13.15□□□□□ -0.3
TRIM39-209ENST00000428728 CABLES2Q9BTV7 478 aa13.15□□□□□ -0.3
TRIM39-209ENST00000428728 SLA2Q9H6Q3 261 aa13.15□□□□□ -0.3
TRIM39-209ENST00000428728 TENM3Q9P273 2699 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 GSTT2P0CG29 244 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 GSTT2BP0CG30 244 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 GNB3P16520 340 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 SERPINB10P48595 397 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 PSMD7P51665 324 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 SSBP2P81877 361 aaPredicted RBP13.14□□□□□ -0.31
TRIM39-209ENST00000428728 DEFA5Q01523 94 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 PJVKQ0ZLH3 352 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 TBCEQ15813 527 aaPredicted RBP13.14□□□□□ -0.31
TRIM39-209ENST00000428728 SSX1Q16384 188 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 SRSF7Q16629 238 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRIM39-209ENST00000428728 ZNF367Q7RTV3 350 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 SBSPONQ8IVN8 264 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 POC5Q8NA72 575 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 OR5T1Q8NG75 326 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 OR10J5Q8NHC4 309 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 C5orf30Q96GV9 206 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 RHOVQ96L33 236 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 CNBD2Q96M20 576 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 OR4C12Q96R67 309 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 RSRP1Q9BUV0 290 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 SDHAF2Q9NX18 166 aa13.14□□□□□ -0.31
TRIM39-209ENST00000428728 ZNF230Q9UIE0 474 aaPredicted RBP13.14□□□□□ -0.31
TRIM39-209ENST00000428728 KMT2CQ8NEZ4 4911 aaKnown RBP13.14□□□□□ -0.31
TRIM39-209ENST00000428728 A0A0B4J203 849 aa13.13□□□□□ -0.31
TRIM39-209ENST00000428728 C13orf42A0A1B0GVH6 325 aa13.13□□□□□ -0.31
TRIM39-209ENST00000428728 SHISA3A0PJX4 238 aa13.13□□□□□ -0.31
TRIM39-209ENST00000428728 TRIM64CA6NLI5 447 aa13.13□□□□□ -0.31
TRIM39-209ENST00000428728 MFNGO00587 321 aa13.13□□□□□ -0.31
TRIM39-209ENST00000428728 PDCD5O14737 125 aa13.13□□□□□ -0.31
TRIM39-209ENST00000428728 IGLV2-23P01705 113 aa13.13□□□□□ -0.31
TRIM39-209ENST00000428728 GADD45AP24522 165 aa13.13□□□□□ -0.31
TRIM39-209ENST00000428728 MYL9P24844 172 aa13.13□□□□□ -0.31
TRIM39-209ENST00000428728 RANBP1P43487 201 aa13.13□□□□□ -0.31
TRIM39-209ENST00000428728 IZUMO2Q6UXV1 221 aa13.13□□□□□ -0.31
TRIM39-209ENST00000428728 OR10R2Q8NGX6 335 aa13.13□□□□□ -0.31
TRIM39-209ENST00000428728 RBM7Q9Y580 266 aaKnown RBP13.13□□□□□ -0.31
TRIM39-209ENST00000428728 TNCP24821 2201 aa13.13□□□□□ -0.31
TRIM39-209ENST00000428728 ANKRD34BA5PLL1 514 aa13.12□□□□□ -0.31
TRIM39-209ENST00000428728 SHOXO15266 292 aa13.12□□□□□ -0.31
TRIM39-209ENST00000428728 FRMD6-AS1P0C7T7 363 aa13.12□□□□□ -0.31
TRIM39-209ENST00000428728 HIST1H1DP16402 221 aaKnown RBP13.12□□□□□ -0.31
TRIM39-209ENST00000428728 CBX3Q13185 183 aa13.12□□□□□ -0.31
TRIM39-209ENST00000428728 BVESQ8NE79 360 aa13.12□□□□□ -0.31
TRIM39-209ENST00000428728 RCHY1Q96PM5 261 aa13.12□□□□□ -0.31
TRIM39-209ENST00000428728 GINS4Q9BRT9 223 aa13.12□□□□□ -0.31
TRIM39-209ENST00000428728 VCX3BQ9H321 246 aa13.12□□□□□ -0.31
TRIM39-209ENST00000428728 TRBV6-7A0A0A0MS04 114 aa13.11□□□□□ -0.31
TRIM39-209ENST00000428728 SMIM30A4D0T7 59 aa13.11□□□□□ -0.31
TRIM39-209ENST00000428728 IFITM5A6NNB3 132 aa13.11□□□□□ -0.31
TRIM39-209ENST00000428728 APELAP0DMC3 54 aa13.11□□□□□ -0.31
TRIM39-209ENST00000428728 ARFRP1Q13795 201 aa13.11□□□□□ -0.31
TRIM39-209ENST00000428728 RTL8BQ17RB0 113 aa13.11□□□□□ -0.31
TRIM39-209ENST00000428728 ELOVL1Q9BW60 279 aa13.11□□□□□ -0.31
TRIM39-209ENST00000428728 NDUFB11Q9NX14 153 aa13.11□□□□□ -0.31
TRIM39-209ENST00000428728 BLOC1S6Q9UL45 172 aa13.11□□□□□ -0.31
TRIM39-209ENST00000428728 STUB1Q9UNE7 303 aa13.11□□□□□ -0.31
TRIM39-209ENST00000428728 TRAV1-2A0A0B4J238 106 aa13.1□□□□□ -0.31
TRIM39-209ENST00000428728 H3BUA1 57 aa13.1□□□□□ -0.31
TRIM39-209ENST00000428728 RAB27BO00194 218 aa13.1□□□□□ -0.31
TRIM39-209ENST00000428728 CRYGBP07316 175 aa13.1□□□□□ -0.31
TRIM39-209ENST00000428728 RAB3BP20337 219 aa13.1□□□□□ -0.31
TRIM39-209ENST00000428728 RAB6AP20340 208 aa13.1□□□□□ -0.31
TRIM39-209ENST00000428728 ZP3P21754 424 aa13.1□□□□□ -0.31
TRIM39-209ENST00000428728 TALDO1P37837 337 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms