RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 DPPA5A6NC42 116 aa18.35■□□□□ 0.53
SMARCB1-205ENST00000417137 GABARAPH6UMI1 98 aa18.35■□□□□ 0.53
SMARCB1-205ENST00000417137 RRASP10301 218 aa18.35■□□□□ 0.53
SMARCB1-205ENST00000417137 TNFSF8P32971 234 aa18.35■□□□□ 0.53
SMARCB1-205ENST00000417137 ACTBL2Q562R1 376 aa18.35■□□□□ 0.53
SMARCB1-205ENST00000417137 OR6F1Q8NGZ6 308 aa18.35■□□□□ 0.53
SMARCB1-205ENST00000417137 OR52I2Q8NH67 350 aa18.35■□□□□ 0.53
SMARCB1-205ENST00000417137 SLC35D1Q9NTN3 355 aa18.35■□□□□ 0.53
SMARCB1-205ENST00000417137 MTFP1Q9UDX5 166 aa18.35■□□□□ 0.53
SMARCB1-205ENST00000417137 IGKV1D-13A0A0B4J2D9 117 aa18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 NBR2O15453 112 aa18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 IGKV1-13P0DP09 117 aa18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 VSIG10L2P0DP72 767 aa18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 HRH1P35367 487 aa18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 HERV-K104P61576 105 aa18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 MSMO1Q15800 293 aa18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 RTL8BQ17RB0 113 aa18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 RNASE12Q5GAN4 147 aaKnown RBP18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 ZBTB34Q8NCN2 500 aa18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 NPBQ8NG41 125 aa18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 SECTM1Q8WVN6 248 aa18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 BORCS5Q969J3 196 aa18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 FLYWCH2Q96CP2 140 aaKnown RBP18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 KLK11Q9UBX7 282 aa18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 RBMX2Q9Y388 322 aaKnown RBP18.34■□□□□ 0.53
SMARCB1-205ENST00000417137 FABP12A6NFH5 140 aa18.33■□□□□ 0.52
SMARCB1-205ENST00000417137 SH2D7A6NKC9 451 aaPredicted RBP18.33■□□□□ 0.52
SMARCB1-205ENST00000417137 CTDSPLO15194 276 aa18.33■□□□□ 0.52
SMARCB1-205ENST00000417137 DUTP33316 252 aaKnown RBP18.33■□□□□ 0.52
SMARCB1-205ENST00000417137 TSPAN5P62079 268 aa18.33■□□□□ 0.52
SMARCB1-205ENST00000417137 RPS16P62249 146 aaKnown RBP18.33■□□□□ 0.52
SMARCB1-205ENST00000417137 SSBP1Q04837 148 aaKnown RBP18.33■□□□□ 0.52
SMARCB1-205ENST00000417137 FAM71E2Q8N5Q1 922 aa18.33■□□□□ 0.52
SMARCB1-205ENST00000417137 KLHDC1Q8N7A1 406 aa18.33■□□□□ 0.52
SMARCB1-205ENST00000417137 RITA1Q96K30 269 aa18.33■□□□□ 0.52
SMARCB1-205ENST00000417137 TSNAXQ99598 290 aaKnown RBP18.33■□□□□ 0.52
SMARCB1-205ENST00000417137 HSD17B10Q99714 261 aaKnown RBP18.33■□□□□ 0.52
SMARCB1-205ENST00000417137 ZNF2Q9BSG1 426 aaPredicted RBP18.33■□□□□ 0.52
SMARCB1-205ENST00000417137 SLC5A7Q9GZV3 580 aa18.33■□□□□ 0.52
SMARCB1-205ENST00000417137 PRELID3BQ9Y3B1 194 aa18.33■□□□□ 0.52
SMARCB1-205ENST00000417137 LINC00205P59089 165 aa18.32■□□□□ 0.52
SMARCB1-205ENST00000417137 FXYD4P59646 89 aa18.32■□□□□ 0.52
SMARCB1-205ENST00000417137 SLC35E3Q7Z769 313 aa18.32■□□□□ 0.52
SMARCB1-205ENST00000417137 C5orf30Q96GV9 206 aa18.32■□□□□ 0.52
SMARCB1-205ENST00000417137 KCNAB3O43448 404 aa18.31■□□□□ 0.52
SMARCB1-205ENST00000417137 IGHG2P01859 326 aa18.31■□□□□ 0.52
SMARCB1-205ENST00000417137 IFNA6P05013 189 aa18.31■□□□□ 0.52
SMARCB1-205ENST00000417137 TBPP20226 339 aa18.31■□□□□ 0.52
SMARCB1-205ENST00000417137 LGALS7P47929 136 aa18.31■□□□□ 0.52
SMARCB1-205ENST00000417137 ZNF66Q6ZN08 573 aa18.31■□□□□ 0.52
SMARCB1-205ENST00000417137 CENPVQ7Z7K6 275 aaPredicted RBP18.31■□□□□ 0.52
SMARCB1-205ENST00000417137 FOXRED2Q8IWF2 684 aa18.31■□□□□ 0.52
SMARCB1-205ENST00000417137 BVESQ8NE79 360 aa18.31■□□□□ 0.52
SMARCB1-205ENST00000417137 RBMXL1Q96E39 390 aaKnown RBP18.31■□□□□ 0.52
SMARCB1-205ENST00000417137 CITED1Q99966 193 aa18.31■□□□□ 0.52
SMARCB1-205ENST00000417137 WNT10AQ9GZT5 417 aa18.31■□□□□ 0.52
SMARCB1-205ENST00000417137 CCL28Q9NRJ3 127 aa18.31■□□□□ 0.52
SMARCB1-205ENST00000417137 ZNF107Q9UII5 783 aaPredicted RBP18.31■□□□□ 0.52
SMARCB1-205ENST00000417137 NDUFA3O95167 84 aa18.3■□□□□ 0.52
SMARCB1-205ENST00000417137 IGLV2-14P01704 120 aa18.3■□□□□ 0.52
SMARCB1-205ENST00000417137 IGKV1-16P04430 117 aa18.3■□□□□ 0.52
SMARCB1-205ENST00000417137 DGCR2P98153 550 aa18.3■□□□□ 0.52
SMARCB1-205ENST00000417137 PLGLAQ15195 96 aa18.3■□□□□ 0.52
SMARCB1-205ENST00000417137 C5orf64Q2M2E5 130 aa18.3■□□□□ 0.52
SMARCB1-205ENST00000417137 RNASE10Q5GAN6 216 aaKnown RBP18.3■□□□□ 0.52
SMARCB1-205ENST00000417137 VAX1Q5SQQ9 334 aa18.3■□□□□ 0.52
SMARCB1-205ENST00000417137 ZNF660Q6AZW8 331 aaPredicted RBP18.3■□□□□ 0.52
SMARCB1-205ENST00000417137 LIN54Q6MZP7 749 aa18.3■□□□□ 0.52
SMARCB1-205ENST00000417137 TMEM17Q86X19 198 aa18.3■□□□□ 0.52
SMARCB1-205ENST00000417137 SMIM4Q8WVI0 70 aa18.3■□□□□ 0.52
SMARCB1-205ENST00000417137 MOB3AQ96BX8 217 aa18.3■□□□□ 0.52
SMARCB1-205ENST00000417137 RRHO14718 337 aa18.29■□□□□ 0.52
SMARCB1-205ENST00000417137 CNTFRP26992 372 aa18.29■□□□□ 0.52
SMARCB1-205ENST00000417137 TAS2R19P59542 299 aa18.29■□□□□ 0.52
SMARCB1-205ENST00000417137 TMEM95Q3KNT9 176 aa18.29■□□□□ 0.52
SMARCB1-205ENST00000417137 LPCAT3Q6P1A2 487 aa18.29■□□□□ 0.52
SMARCB1-205ENST00000417137 KCTD9Q7L273 389 aa18.29■□□□□ 0.52
SMARCB1-205ENST00000417137 TMEM229BQ8NBD8 167 aa18.29■□□□□ 0.52
SMARCB1-205ENST00000417137 DDB2Q92466 427 aa18.29■□□□□ 0.52
SMARCB1-205ENST00000417137 SOSTQ9BQB4 213 aa18.29■□□□□ 0.52
SMARCB1-205ENST00000417137 TAS2R8Q9NYW2 309 aa18.29■□□□□ 0.52
SMARCB1-205ENST00000417137 LINC00473A8K010 186 aa18.28■□□□□ 0.52
SMARCB1-205ENST00000417137 SPDEFO95238 335 aa18.28■□□□□ 0.52
SMARCB1-205ENST00000417137 KRTAP10-3P60369 221 aa18.28■□□□□ 0.52
SMARCB1-205ENST00000417137 SRSF4Q08170 494 aaKnown RBP18.28■□□□□ 0.52
SMARCB1-205ENST00000417137 TMEM177Q53S58 311 aa18.28■□□□□ 0.52
SMARCB1-205ENST00000417137 MFSD4AQ8N468 514 aa18.28■□□□□ 0.52
SMARCB1-205ENST00000417137 CHPT1Q8WUD6 406 aa18.28■□□□□ 0.52
SMARCB1-205ENST00000417137 TCTEX1D2Q8WW35 142 aa18.28■□□□□ 0.52
SMARCB1-205ENST00000417137 ANK2Q01484 3957 aa18.27■□□□□ 0.52
SMARCB1-205ENST00000417137 AP4M1O00189 453 aa18.27■□□□□ 0.52
SMARCB1-205ENST00000417137 SHOXO15266 292 aa18.27■□□□□ 0.52
SMARCB1-205ENST00000417137 GSTZ1O43708 216 aaPredicted RBP18.27■□□□□ 0.52
SMARCB1-205ENST00000417137 HLA-DRB1P01911 266 aa18.27■□□□□ 0.52
SMARCB1-205ENST00000417137 CD3DP04234 171 aa18.27■□□□□ 0.52
SMARCB1-205ENST00000417137 CSF1P09603 554 aa18.27■□□□□ 0.52
SMARCB1-205ENST00000417137 PSG5Q15238 335 aa18.27■□□□□ 0.52
SMARCB1-205ENST00000417137 HARBI1Q96MB7 349 aa18.27■□□□□ 0.52
SMARCB1-205ENST00000417137 GON7Q9BXV9 100 aa18.27■□□□□ 0.52
SMARCB1-205ENST00000417137 FBXL15Q9H469 300 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms