RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 MOGAT2Q3SYC2 334 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 CD200R1LQ6Q8B3 271 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 LFNGQ8NES3 379 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 GRPEL2Q8TAA5 225 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 ARPC1AQ92747 370 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 MS4A10Q96PG2 267 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 TOLLIPQ9H0E2 274 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 OR2D2Q9H210 308 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 TPSG1Q9NRR2 321 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 SLC35D1Q9NTN3 355 aa17.28■□□□□ 0.36
MSH6-202ENST00000411819 IGHV4OR15-8A0A075B7B6 117 aa17.27■□□□□ 0.36
MSH6-202ENST00000411819 A0A087WW49 117 aa17.27■□□□□ 0.36
MSH6-202ENST00000411819 SLC25A17O43808 307 aa17.27■□□□□ 0.36
MSH6-202ENST00000411819 FCGR3AP08637 254 aa17.27■□□□□ 0.36
MSH6-202ENST00000411819 NHLRC4P0CG21 123 aaPredicted RBP17.27■□□□□ 0.36
MSH6-202ENST00000411819 CD40LGP29965 261 aa17.27■□□□□ 0.36
MSH6-202ENST00000411819 SERPINB10P48595 397 aa17.27■□□□□ 0.36
MSH6-202ENST00000411819 ZNF562Q6V9R5 426 aa17.27■□□□□ 0.36
MSH6-202ENST00000411819 ZNF429Q86V71 674 aa17.27■□□□□ 0.36
MSH6-202ENST00000411819 DLX4Q92988 240 aaPredicted RBP17.27■□□□□ 0.36
MSH6-202ENST00000411819 FLYWCH2Q96CP2 140 aaKnown RBP17.27■□□□□ 0.36
MSH6-202ENST00000411819 OR8U9P0C7N5 309 aa17.26■□□□□ 0.35
MSH6-202ENST00000411819 GNB3P16520 340 aa17.26■□□□□ 0.35
MSH6-202ENST00000411819 AKIRIN2Q53H80 203 aa17.26■□□□□ 0.35
MSH6-202ENST00000411819 IGSF11Q5DX21 431 aa17.26■□□□□ 0.35
MSH6-202ENST00000411819 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.26■□□□□ 0.35
MSH6-202ENST00000411819 OR10R2Q8NGX6 335 aa17.26■□□□□ 0.35
MSH6-202ENST00000411819 OR10J5Q8NHC4 309 aa17.26■□□□□ 0.35
MSH6-202ENST00000411819 MAFIPQ8WZ33 124 aa17.26■□□□□ 0.35
MSH6-202ENST00000411819 ASCL2Q99929 193 aa17.26■□□□□ 0.35
MSH6-202ENST00000411819 CABLES2Q9BTV7 478 aa17.26■□□□□ 0.35
MSH6-202ENST00000411819 KCNK7Q9Y2U2 307 aa17.26■□□□□ 0.35
MSH6-202ENST00000411819 SORL1Q92673 2214 aa17.25■□□□□ 0.35
MSH6-202ENST00000411819 SHISA3A0PJX4 238 aa17.25■□□□□ 0.35
MSH6-202ENST00000411819 IFITM5A6NNB3 132 aa17.25■□□□□ 0.35
MSH6-202ENST00000411819 FXYD3Q14802 87 aa17.25■□□□□ 0.35
MSH6-202ENST00000411819 ZNF355PQ9NSJ1 428 aa17.25■□□□□ 0.35
MSH6-202ENST00000411819 NDUFB11Q9NX14 153 aa17.25■□□□□ 0.35
MSH6-202ENST00000411819 RBM7Q9Y580 266 aaKnown RBP17.25■□□□□ 0.35
MSH6-202ENST00000411819 U3KQK5 164 aa17.25■□□□□ 0.35
MSH6-202ENST00000411819 KMT2CQ8NEZ4 4911 aaKnown RBP17.25■□□□□ 0.35
MSH6-202ENST00000411819 TRAV1-2A0A0B4J238 106 aa17.24■□□□□ 0.35
MSH6-202ENST00000411819 TRGV3P03979 118 aa17.24■□□□□ 0.35
MSH6-202ENST00000411819 GSTT2P0CG29 244 aa17.24■□□□□ 0.35
MSH6-202ENST00000411819 GSTT2BP0CG30 244 aa17.24■□□□□ 0.35
MSH6-202ENST00000411819 RAB3BP20337 219 aa17.24■□□□□ 0.35
MSH6-202ENST00000411819 CBX3Q13185 183 aa17.24■□□□□ 0.35
MSH6-202ENST00000411819 GINS4Q9BRT9 223 aa17.24■□□□□ 0.35
MSH6-202ENST00000411819 SLA2Q9H6Q3 261 aa17.24■□□□□ 0.35
MSH6-202ENST00000411819 ZNF230Q9UIE0 474 aaPredicted RBP17.24■□□□□ 0.35
MSH6-202ENST00000411819 A0A0B4J203 849 aa17.23■□□□□ 0.35
MSH6-202ENST00000411819 MFNGO00587 321 aa17.23■□□□□ 0.35
MSH6-202ENST00000411819 CNIH1O95406 144 aa17.23■□□□□ 0.35
MSH6-202ENST00000411819 HIST1H1DP16402 221 aaKnown RBP17.23■□□□□ 0.35
MSH6-202ENST00000411819 PITPNAQ00169 270 aa17.23■□□□□ 0.35
MSH6-202ENST00000411819 ARFRP1Q13795 201 aa17.23■□□□□ 0.35
MSH6-202ENST00000411819 HARBI1Q96MB7 349 aa17.23■□□□□ 0.35
MSH6-202ENST00000411819 SDHAF2Q9NX18 166 aa17.23■□□□□ 0.35
MSH6-202ENST00000411819 SMAD5-AS1Q9Y6J3 95 aa17.23■□□□□ 0.35
MSH6-202ENST00000411819 TRBV6-7A0A0A0MS04 114 aa17.22■□□□□ 0.35
MSH6-202ENST00000411819 METTL21EPA6NDL7 271 aa17.22■□□□□ 0.35
MSH6-202ENST00000411819 ARPC1BO15143 372 aaKnown RBP17.22■□□□□ 0.35
MSH6-202ENST00000411819 RAB6AP20340 208 aa17.22■□□□□ 0.35
MSH6-202ENST00000411819 TALDO1P37837 337 aa17.22■□□□□ 0.35
MSH6-202ENST00000411819 C22orf42Q6IC83 251 aa17.22■□□□□ 0.35
MSH6-202ENST00000411819 TRDV1A0A1B0GX56 115 aa17.21■□□□□ 0.35
MSH6-202ENST00000411819 SMIM30A4D0T7 59 aa17.21■□□□□ 0.35
MSH6-202ENST00000411819 ERICH4A6NGS2 130 aa17.21■□□□□ 0.35
MSH6-202ENST00000411819 RAB27BO00194 218 aa17.21■□□□□ 0.35
MSH6-202ENST00000411819 HSPB1P04792 205 aaKnown RBP17.21■□□□□ 0.35
MSH6-202ENST00000411819 SPNP16150 400 aa17.21■□□□□ 0.35
MSH6-202ENST00000411819 POC5Q8NA72 575 aa17.21■□□□□ 0.35
MSH6-202ENST00000411819 OR6Q1Q8NGQ2 317 aa17.21■□□□□ 0.35
MSH6-202ENST00000411819 ATG5Q9H1Y0 275 aa17.21■□□□□ 0.35
MSH6-202ENST00000411819 RAB26Q9ULW5 256 aa17.21■□□□□ 0.35
MSH6-202ENST00000411819 SHOXO15266 292 aa17.2■□□□□ 0.34
MSH6-202ENST00000411819 DIRAS3O95661 229 aa17.2■□□□□ 0.34
MSH6-202ENST00000411819 IGLV2-23P01705 113 aa17.2■□□□□ 0.34
MSH6-202ENST00000411819 LGALS7P47929 136 aa17.2■□□□□ 0.34
MSH6-202ENST00000411819 PJVKQ0ZLH3 352 aa17.2■□□□□ 0.34
MSH6-202ENST00000411819 RTL8BQ17RB0 113 aa17.2■□□□□ 0.34
MSH6-202ENST00000411819 ACSM6Q6P461 480 aa17.2■□□□□ 0.34
MSH6-202ENST00000411819 BVESQ8NE79 360 aa17.2■□□□□ 0.34
MSH6-202ENST00000411819 OR5T1Q8NG75 326 aa17.2■□□□□ 0.34
MSH6-202ENST00000411819 C5orf30Q96GV9 206 aa17.2■□□□□ 0.34
MSH6-202ENST00000411819 RHOVQ96L33 236 aa17.2■□□□□ 0.34
MSH6-202ENST00000411819 C13orf42A0A1B0GVH6 325 aa17.19■□□□□ 0.34
MSH6-202ENST00000411819 GABARAPL2P60520 117 aa17.19■□□□□ 0.34
MSH6-202ENST00000411819 OR4C12Q96R67 309 aa17.19■□□□□ 0.34
MSH6-202ENST00000411819 H3BUA1 57 aa17.18■□□□□ 0.34
MSH6-202ENST00000411819 GP9P14770 177 aa17.18■□□□□ 0.34
MSH6-202ENST00000411819 PSMB9P28065 219 aa17.18■□□□□ 0.34
MSH6-202ENST00000411819 SSBP2P81877 361 aaPredicted RBP17.18■□□□□ 0.34
MSH6-202ENST00000411819 TAGLNQ01995 201 aaKnown RBP17.18■□□□□ 0.34
MSH6-202ENST00000411819 ELF5Q9UKW6 265 aaPredicted RBP17.18■□□□□ 0.34
MSH6-202ENST00000411819 TENM3Q9P273 2699 aa17.17■□□□□ 0.34
MSH6-202ENST00000411819 GALP22466 123 aa17.17■□□□□ 0.34
MSH6-202ENST00000411819 DEFA5Q01523 94 aa17.17■□□□□ 0.34
MSH6-202ENST00000411819 TMEM177Q53S58 311 aa17.17■□□□□ 0.34
MSH6-202ENST00000411819 HAPLN4Q86UW8 402 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms