RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 SMDT1Q9H4I9 107 aa12.71□□□□□ -0.37
ATG4B-206ENST00000405546 SIAH2O43255 324 aa12.71□□□□□ -0.38
ATG4B-206ENST00000405546 GCGP01275 180 aa12.71□□□□□ -0.38
ATG4B-206ENST00000405546 TFF1P04155 84 aa12.71□□□□□ -0.38
ATG4B-206ENST00000405546 CTXN2P0C2S0 81 aa12.71□□□□□ -0.38
ATG4B-206ENST00000405546 F2RP25116 425 aa12.71□□□□□ -0.38
ATG4B-206ENST00000405546 CEACAM6P40199 344 aa12.71□□□□□ -0.38
ATG4B-206ENST00000405546 PAX9P55771 341 aa12.71□□□□□ -0.38
ATG4B-206ENST00000405546 COLCA1Q6ZS62 124 aa12.71□□□□□ -0.38
ATG4B-206ENST00000405546 LRTM2Q8N967 370 aa12.71□□□□□ -0.38
ATG4B-206ENST00000405546 NANOS1Q8WY41 292 aaKnown RBP12.71□□□□□ -0.38
ATG4B-206ENST00000405546 OR5P3Q8WZ94 311 aa12.71□□□□□ -0.38
ATG4B-206ENST00000405546 OR2W1Q9Y3N9 320 aa12.71□□□□□ -0.38
ATG4B-206ENST00000405546 TRAV24A0A0B4J272 114 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 AQP7O14520 342 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 AGFG2O95081 481 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 PAX1P15863 534 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 TBC1D28Q2M2D7 210 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 SPINK9Q5DT21 86 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 DPPA3Q6W0C5 159 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 FER1L6-AS2Q96M78 137 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 OR51I2Q9H344 312 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 IGKV3D-15A0A087WSY6 115 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 SPINK4O60575 86 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 NAPSAO96009 420 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 FABP6P51161 128 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 TGFBR3Q03167 851 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 MRPL49Q13405 166 aaKnown RBP12.7□□□□□ -0.38
ATG4B-206ENST00000405546 RNPS1Q15287 305 aaKnown RBP12.7□□□□□ -0.38
ATG4B-206ENST00000405546 Q6ZRM9 215 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 ZNF826PQ6ZT77 177 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 OR10V1Q8NGI7 309 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 GPR146Q96CH1 333 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 PARLQ9H300 379 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 CD81P60033 236 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 RNF151Q2KHN1 245 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 FBXW9Q5XUX1 488 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 TPRX1Q8N7U7 411 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 MRPL30Q8TCC3 161 aaKnown RBP12.7□□□□□ -0.38
ATG4B-206ENST00000405546 TRIB1Q96RU8 372 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 LINC00470Q9BZP3 86 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 PLSCR2Q9NRY7 297 aa12.7□□□□□ -0.38
ATG4B-206ENST00000405546 B4DEV8 164 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 KRASP01116 189 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 S100A7P31151 101 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 HOXC12P31275 282 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 CDKN1AP38936 164 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 DAZAP2Q15038 168 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-206ENST00000405546 TMEM41BQ5BJD5 291 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 ZNF766Q5HY98 468 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 OR2T10Q8NGZ9 312 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 RFESDQ8TAC1 157 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 PCNX1Q96RV3 2341 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 IGKV1D-33P01593 117 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 IGKV1-33P01594 117 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 C11orf42Q8N5U0 333 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 RTL8AQ9BWD3 113 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 LPAR2Q9HBW0 351 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 CISD1Q9NZ45 108 aaKnown RBP12.69□□□□□ -0.38
ATG4B-206ENST00000405546 TAAR3PQ9P1P4 343 aa12.69□□□□□ -0.38
ATG4B-206ENST00000405546 MRPS18CQ9Y3D5 142 aaKnown RBP12.69□□□□□ -0.38
ATG4B-206ENST00000405546 KIAA1324LA8MWY0 1029 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-206ENST00000405546 MDH2P40926 338 aaKnown RBP12.68□□□□□ -0.38
ATG4B-206ENST00000405546 CNN1P51911 297 aaKnown RBP12.68□□□□□ -0.38
ATG4B-206ENST00000405546 PNRC1Q12796 327 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-206ENST00000405546 TRAPPC1Q9Y5R8 145 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 MPC1Q9Y5U8 109 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 KRTAP27-1Q3LI81 207 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 RNFT1Q5M7Z0 435 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 TMEM56Q96MV1 263 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 NAT8Q9UHE5 227 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 VAX2Q9UIW0 290 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 TMEM56-RWDD3S4R434 201 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 OR2H2O95918 312 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 IGHV3-13P01766 116 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 IGHV3-7P01780 117 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 RAB4AP20338 218 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 THBS3P49746 956 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 PPP1CBP62140 327 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 ZNF816Q0VGE8 651 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-206ENST00000405546 H1FOOQ8IZA3 346 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-206ENST00000405546 SLC25A40Q8TBP6 338 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 RNASEH2CQ8TDP1 164 aaKnown RBP12.68□□□□□ -0.38
ATG4B-206ENST00000405546 DERL1Q9BUN8 251 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 DNAJC4Q9NNZ3 241 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 PSENENQ9NZ42 101 aa12.68□□□□□ -0.38
ATG4B-206ENST00000405546 POLEQ07864 2286 aa12.67□□□□□ -0.38
ATG4B-206ENST00000405546 ZFHX2Q9C0A1 2572 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-206ENST00000405546 DEFB108AA8MXU0 73 aa12.67□□□□□ -0.38
ATG4B-206ENST00000405546 PAGE4O60829 102 aa12.67□□□□□ -0.38
ATG4B-206ENST00000405546 CLDN1O95832 211 aa12.67□□□□□ -0.38
ATG4B-206ENST00000405546 GABRA2P47869 451 aa12.67□□□□□ -0.38
ATG4B-206ENST00000405546 FAM53AQ6NSI3 398 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-206ENST00000405546 SCCPDHQ8NBX0 429 aa12.67□□□□□ -0.38
ATG4B-206ENST00000405546 SNIP1Q8TAD8 396 aaKnown RBP12.67□□□□□ -0.38
ATG4B-206ENST00000405546 OR4C12Q96R67 309 aa12.67□□□□□ -0.38
ATG4B-206ENST00000405546 C11orf1Q9H5F2 150 aa12.67□□□□□ -0.38
ATG4B-206ENST00000405546 OR5B21A6NL26 309 aa12.67□□□□□ -0.38
ATG4B-206ENST00000405546 C21orf140B9A014 251 aa12.67□□□□□ -0.38
ATG4B-206ENST00000405546 GYPAP02724 150 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms