RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 AMMECR1Q9Y4X0 333 aaPredicted RBP16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 ABCA2Q9BZC7 2435 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 ABCA12Q86UK0 2595 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 DUXBA0A1W2PPF3 345 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 RNF223E7ERA6 249 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 FCGR3BO75015 233 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 ARG1P05089 322 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 MSMBP08118 114 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 RPA2P15927 270 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 ZNF137PP52743 207 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 CD300LFQ8TDQ1 290 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 WDR89Q96FK6 387 aaPredicted RBP16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 Q96MF0 132 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 TMED3Q9Y3Q3 217 aa16.61■□□□□ 0.25
VCPKMT-202ENST00000395860 CSMD2Q7Z408 3487 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 MPTX1A8MV57 137 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 B4DSR2 109 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 SMLR1H3BR10 107 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 BUB1B-PAK6H3BSN5 160 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 MMP9P14780 707 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 KIR2DS2P43631 304 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 BRWD1-AS2P59051 145 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 LOXL1Q08397 574 aaPredicted RBP16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 HCP5Q6MZN7 132 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 OR4P4Q8NGL7 312 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 OR2T35Q8NGX2 323 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 DDB2Q92466 427 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 ST6GALNAC6Q969X2 333 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 OR10C1Q96KK4 312 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 REG4Q9BYZ8 158 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 POLQO75417 2590 aa16.6■□□□□ 0.25
VCPKMT-202ENST00000395860 IGKV1-39P01597 117 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 IGKV1D-39P04432 117 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 CT45A6P0DMU7 189 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 CT45A5P0DMU8 189 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 CT45A7P0DMV0 189 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 HOXB4P17483 251 aaPredicted RBP16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 REG1BP48304 166 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 SRSF4Q08170 494 aaKnown RBP16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 DIAPH2-AS1Q14236 149 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 KRTAP1-3Q8IUG1 177 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 PDZD9Q8IXQ8 264 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 ZNF383Q8NA42 475 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 RNASE11Q8TAA1 199 aaKnown RBP16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 VDAC1P21796 283 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 PAX8Q06710 450 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 ZFP69Q49AA0 526 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 TGIF2LXQ8IUE1 241 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 C1orf159Q96HA4 380 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 C2orf50Q96LR7 162 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 TBX15Q96SF7 602 aa16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 MRPL20Q9BYC9 149 aaKnown RBP16.59■□□□□ 0.25
VCPKMT-202ENST00000395860 RNASEK-C17orf49H0YIS7 233 aa16.58■□□□□ 0.24
VCPKMT-202ENST00000395860 S1PR2O95136 353 aa16.58■□□□□ 0.24
VCPKMT-202ENST00000395860 AKR1C2P52895 323 aa16.58■□□□□ 0.24
VCPKMT-202ENST00000395860 CYCSP99999 105 aaKnown RBP16.58■□□□□ 0.24
VCPKMT-202ENST00000395860 IAH1Q2TAA2 248 aaPredicted RBP16.58■□□□□ 0.24
VCPKMT-202ENST00000395860 NMES1Q9C002 83 aa16.58■□□□□ 0.24
VCPKMT-202ENST00000395860 WNK2Q9Y3S1 2297 aa16.58■□□□□ 0.24
VCPKMT-202ENST00000395860 NBPF19A0A087WUL8 3843 aa16.57■□□□□ 0.24
VCPKMT-202ENST00000395860 ODF3BA8MYP8 253 aa16.57■□□□□ 0.24
VCPKMT-202ENST00000395860 RBFOX2O43251 390 aaKnown RBP eCLIP16.57■□□□□ 0.24
VCPKMT-202ENST00000395860 HPRT1P00492 218 aa16.57■□□□□ 0.24
VCPKMT-202ENST00000395860 HTR1DP28221 377 aa16.57■□□□□ 0.24
VCPKMT-202ENST00000395860 LINC01356Q8N9X3 169 aa16.57■□□□□ 0.24
VCPKMT-202ENST00000395860 MAPK1IP1LQ8NDC0 245 aa16.57■□□□□ 0.24
VCPKMT-202ENST00000395860 OR4S2Q8NH73 311 aa16.57■□□□□ 0.24
VCPKMT-202ENST00000395860 LHX4Q969G2 390 aa16.57■□□□□ 0.24
VCPKMT-202ENST00000395860 RANBP3Q9H6Z4 567 aaPredicted RBP16.57■□□□□ 0.24
VCPKMT-202ENST00000395860 ASH1LQ9NR48 2969 aaKnown RBP16.57■□□□□ 0.24
VCPKMT-202ENST00000395860 GSKIPQ9P0R6 139 aa16.57■□□□□ 0.24
VCPKMT-202ENST00000395860 CR1P17927 2039 aa16.57■□□□□ 0.24
VCPKMT-202ENST00000395860 MED13LQ71F56 2210 aa16.57■□□□□ 0.24
VCPKMT-202ENST00000395860 A0A1W2PRD5 423 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 A0A1W2PRF3 423 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 A0A1W2PRM7 423 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 ATG12O94817 140 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 C1QBP02746 253 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 RPEQ96AT9 228 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 RRNAD1Q96FB5 475 aaKnown RBP16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 NABP2Q9BQ15 211 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 SLC35D1Q9NTN3 355 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 COMMD9Q9P000 198 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 TRAV20A0A0B4J274 112 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 LEUTXA8MZ59 168 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 APOA2P02652 100 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 RTL8BQ17RB0 113 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 LSM10Q969L4 123 aaKnown RBP16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 SPIN2AQ99865 258 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 SPIN2BQ9BPZ2 258 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 PLEKHA2Q9HB19 425 aa16.56■□□□□ 0.24
VCPKMT-202ENST00000395860 FASNP49327 2511 aaKnown RBP16.55■□□□□ 0.24
VCPKMT-202ENST00000395860 CRYZL1O95825 349 aa16.55■□□□□ 0.24
VCPKMT-202ENST00000395860 KRASP01116 189 aa16.55■□□□□ 0.24
VCPKMT-202ENST00000395860 IGKV1-5P01602 117 aa16.55■□□□□ 0.24
VCPKMT-202ENST00000395860 GAPDHP04406 335 aaKnown RBP16.55■□□□□ 0.24
VCPKMT-202ENST00000395860 G6PCP35575 357 aa16.55■□□□□ 0.24
VCPKMT-202ENST00000395860 CEACAM3P40198 252 aa16.55■□□□□ 0.24
VCPKMT-202ENST00000395860 EIF2B2P49770 351 aaKnown RBP16.55■□□□□ 0.24
VCPKMT-202ENST00000395860 TAGLNQ01995 201 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms