RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 RAB27BO00194 218 aa13.9□□□□□ -0.18
CXCL12-204ENST00000395793 MFNGO00587 321 aa13.9□□□□□ -0.18
CXCL12-204ENST00000395793 FABP7O15540 132 aa13.9□□□□□ -0.18
CXCL12-204ENST00000395793 SLC25A17O43808 307 aa13.9□□□□□ -0.18
CXCL12-204ENST00000395793 RPS16P62249 146 aaKnown RBP13.9□□□□□ -0.18
CXCL12-204ENST00000395793 AKIRIN2Q53H80 203 aa13.9□□□□□ -0.18
CXCL12-204ENST00000395793 ACTBL2Q562R1 376 aa13.9□□□□□ -0.18
CXCL12-204ENST00000395793 ZNF562Q6V9R5 426 aa13.9□□□□□ -0.18
CXCL12-204ENST00000395793 NR2C2APQ86WQ0 139 aa13.9□□□□□ -0.18
CXCL12-204ENST00000395793 PDPNQ86YL7 162 aa13.9□□□□□ -0.18
CXCL12-204ENST00000395793 ARPC1AQ92747 370 aa13.9□□□□□ -0.18
CXCL12-204ENST00000395793 RAB3CQ96E17 227 aa13.9□□□□□ -0.18
CXCL12-204ENST00000395793 TSNAXQ99598 290 aaKnown RBP13.9□□□□□ -0.18
CXCL12-204ENST00000395793 ZNF230Q9UIE0 474 aaPredicted RBP13.9□□□□□ -0.18
CXCL12-204ENST00000395793 RAB22AQ9UL26 194 aa13.9□□□□□ -0.18
CXCL12-204ENST00000395793 U3KQK5 164 aa13.9□□□□□ -0.18
CXCL12-204ENST00000395793 TRAV1-2A0A0B4J238 106 aa13.89□□□□□ -0.19
CXCL12-204ENST00000395793 BET1O15155 118 aa13.89□□□□□ -0.19
CXCL12-204ENST00000395793 LY86O95711 162 aa13.89□□□□□ -0.19
CXCL12-204ENST00000395793 APOA2P02652 100 aa13.89□□□□□ -0.19
CXCL12-204ENST00000395793 NHLRC4P0CG21 123 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-204ENST00000395793 GSTT2P0CG29 244 aa13.89□□□□□ -0.19
CXCL12-204ENST00000395793 GSTT2BP0CG30 244 aa13.89□□□□□ -0.19
CXCL12-204ENST00000395793 GNB3P16520 340 aa13.89□□□□□ -0.19
CXCL12-204ENST00000395793 TPPP2P59282 170 aa13.89□□□□□ -0.19
CXCL12-204ENST00000395793 TMEM267Q0VDI3 215 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-204ENST00000395793 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-204ENST00000395793 OR10R2Q8NGX6 335 aa13.89□□□□□ -0.19
CXCL12-204ENST00000395793 RHOVQ96L33 236 aa13.89□□□□□ -0.19
CXCL12-204ENST00000395793 OR2D2Q9H210 308 aa13.89□□□□□ -0.19
CXCL12-204ENST00000395793 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.89□□□□□ -0.19
CXCL12-204ENST00000395793 SLC35D1Q9NTN3 355 aa13.89□□□□□ -0.19
CXCL12-204ENST00000395793 NDUFB11Q9NX14 153 aa13.89□□□□□ -0.19
CXCL12-204ENST00000395793 SDHAF2Q9NX18 166 aa13.89□□□□□ -0.19
CXCL12-204ENST00000395793 TRBV6-7A0A0A0MS04 114 aa13.88□□□□□ -0.19
CXCL12-204ENST00000395793 IFITM5A6NNB3 132 aa13.88□□□□□ -0.19
CXCL12-204ENST00000395793 SAP30O75446 220 aa13.88□□□□□ -0.19
CXCL12-204ENST00000395793 CRYGBP07316 175 aa13.88□□□□□ -0.19
CXCL12-204ENST00000395793 OR8U9P0C7N5 309 aa13.88□□□□□ -0.19
CXCL12-204ENST00000395793 SPNP16150 400 aa13.88□□□□□ -0.19
CXCL12-204ENST00000395793 HIST1H1DP16402 221 aaKnown RBP13.88□□□□□ -0.19
CXCL12-204ENST00000395793 PJVKQ0ZLH3 352 aa13.88□□□□□ -0.19
CXCL12-204ENST00000395793 PYHIN1Q6K0P9 492 aa13.88□□□□□ -0.19
CXCL12-204ENST00000395793 ACSM6Q6P461 480 aa13.88□□□□□ -0.19
CXCL12-204ENST00000395793 ZNF429Q86V71 674 aa13.88□□□□□ -0.19
CXCL12-204ENST00000395793 GRPEL2Q8TAA5 225 aa13.88□□□□□ -0.19
CXCL12-204ENST00000395793 FLYWCH2Q96CP2 140 aaKnown RBP13.88□□□□□ -0.19
CXCL12-204ENST00000395793 ELF5Q9UKW6 265 aaPredicted RBP13.88□□□□□ -0.19
CXCL12-204ENST00000395793 A0A075B6Q4 140 aa13.87□□□□□ -0.19
CXCL12-204ENST00000395793 IGKV1D-8A0A087WSZ0 117 aa13.87□□□□□ -0.19
CXCL12-204ENST00000395793 SMIM30A4D0T7 59 aa13.87□□□□□ -0.19
CXCL12-204ENST00000395793 SERPINB10P48595 397 aa13.87□□□□□ -0.19
CXCL12-204ENST00000395793 PSMD7P51665 324 aa13.87□□□□□ -0.19
CXCL12-204ENST00000395793 FXYD3Q14802 87 aa13.87□□□□□ -0.19
CXCL12-204ENST00000395793 MRGPRG-AS1Q2M3A8 158 aa13.87□□□□□ -0.19
CXCL12-204ENST00000395793 TNCP24821 2201 aa13.87□□□□□ -0.19
CXCL12-204ENST00000395793 HUWE1Q7Z6Z7 4374 aaKnown RBP13.86□□□□□ -0.19
CXCL12-204ENST00000395793 TRDV1A0A1B0GX56 115 aa13.86□□□□□ -0.19
CXCL12-204ENST00000395793 SRRM4A7MD48 611 aaKnown RBP13.86□□□□□ -0.19
CXCL12-204ENST00000395793 PDCD5O14737 125 aa13.86□□□□□ -0.19
CXCL12-204ENST00000395793 TRGV3P03979 118 aa13.86□□□□□ -0.19
CXCL12-204ENST00000395793 HSPB1P04792 205 aaKnown RBP13.86□□□□□ -0.19
CXCL12-204ENST00000395793 RAB6AP20340 208 aa13.86□□□□□ -0.19
CXCL12-204ENST00000395793 HSPA13P48723 471 aa13.86□□□□□ -0.19
CXCL12-204ENST00000395793 C22orf42Q6IC83 251 aa13.86□□□□□ -0.19
CXCL12-204ENST00000395793 HAPLN4Q86UW8 402 aa13.86□□□□□ -0.19
CXCL12-204ENST00000395793 VCX3BQ9H321 246 aa13.86□□□□□ -0.19
CXCL12-204ENST00000395793 SMAD5-AS1Q9Y6J3 95 aa13.86□□□□□ -0.19
CXCL12-204ENST00000395793 RAB3BP20337 219 aa13.85□□□□□ -0.19
CXCL12-204ENST00000395793 MYL9P24844 172 aa13.85□□□□□ -0.19
CXCL12-204ENST00000395793 MRPS15P82914 257 aaKnown RBP13.85□□□□□ -0.19
CXCL12-204ENST00000395793 DEFA5Q01523 94 aa13.85□□□□□ -0.19
CXCL12-204ENST00000395793 TMEM177Q53S58 311 aa13.85□□□□□ -0.19
CXCL12-204ENST00000395793 POC5Q8NA72 575 aa13.85□□□□□ -0.19
CXCL12-204ENST00000395793 BVESQ8NE79 360 aa13.85□□□□□ -0.19
CXCL12-204ENST00000395793 OR5T1Q8NG75 326 aa13.85□□□□□ -0.19
CXCL12-204ENST00000395793 OR10J5Q8NHC4 309 aa13.85□□□□□ -0.19
CXCL12-204ENST00000395793 HARBI1Q96MB7 349 aa13.85□□□□□ -0.19
CXCL12-204ENST00000395793 SLA2Q9H6Q3 261 aa13.85□□□□□ -0.19
CXCL12-204ENST00000395793 DIRAS3O95661 229 aa13.84□□□□□ -0.19
CXCL12-204ENST00000395793 GP9P14770 177 aa13.84□□□□□ -0.19
CXCL12-204ENST00000395793 GADD45AP24522 165 aa13.84□□□□□ -0.19
CXCL12-204ENST00000395793 SBSPONQ8IVN8 264 aa13.84□□□□□ -0.19
CXCL12-204ENST00000395793 H1FOOQ8IZA3 346 aaPredicted RBP13.84□□□□□ -0.19
CXCL12-204ENST00000395793 DDB2Q92466 427 aa13.84□□□□□ -0.19
CXCL12-204ENST00000395793 BLOC1S6Q9UL45 172 aa13.84□□□□□ -0.19
CXCL12-204ENST00000395793 RYR3Q15413 4870 aa13.83□□□□□ -0.2
CXCL12-204ENST00000395793 TRIM64CA6NLI5 447 aa13.83□□□□□ -0.2
CXCL12-204ENST00000395793 LINC00473A8K010 186 aa13.83□□□□□ -0.2
CXCL12-204ENST00000395793 RBMXL2O75526 392 aaKnown RBP13.83□□□□□ -0.2
CXCL12-204ENST00000395793 RANBP1P43487 201 aa13.83□□□□□ -0.2
CXCL12-204ENST00000395793 LGALS7P47929 136 aa13.83□□□□□ -0.2
CXCL12-204ENST00000395793 PITPNAQ00169 270 aa13.83□□□□□ -0.2
CXCL12-204ENST00000395793 Q6ZS49 121 aa13.83□□□□□ -0.2
CXCL12-204ENST00000395793 OVCH2Q7RTZ1 564 aa13.83□□□□□ -0.2
CXCL12-204ENST00000395793 RAB26Q9ULW5 256 aa13.83□□□□□ -0.2
CXCL12-204ENST00000395793 H3BUA1 57 aa13.82□□□□□ -0.2
CXCL12-204ENST00000395793 CNIH1O95406 144 aa13.82□□□□□ -0.2
CXCL12-204ENST00000395793 DUTP33316 252 aaKnown RBP13.82□□□□□ -0.2
CXCL12-204ENST00000395793 GABARAPL2P60520 117 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms