RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 OR2W1Q9Y3N9 320 aa9.97□□□□□ -0.81
GGPS1-203ENST00000391855 IGHV7-81A0A0B4J1V7 117 aa9.96□□□□□ -0.82
GGPS1-203ENST00000391855 LINC01548A6NM66 108 aa9.96□□□□□ -0.82
GGPS1-203ENST00000391855 IGHG4P01861 327 aa9.96□□□□□ -0.82
GGPS1-203ENST00000391855 CNTFRP26992 372 aa9.96□□□□□ -0.82
GGPS1-203ENST00000391855 LGALS7P47929 136 aa9.96□□□□□ -0.82
GGPS1-203ENST00000391855 RPS16P62249 146 aaKnown RBP9.96□□□□□ -0.82
GGPS1-203ENST00000391855 HOGA1Q86XE5 327 aa9.96□□□□□ -0.82
GGPS1-203ENST00000391855 ANKRD13BQ86YJ7 626 aa9.96□□□□□ -0.82
GGPS1-203ENST00000391855 ZNF645Q8N7E2 425 aa9.96□□□□□ -0.82
GGPS1-203ENST00000391855 SAMD12Q8N8I0 201 aa9.96□□□□□ -0.82
GGPS1-203ENST00000391855 DRAXINQ8NBI3 349 aaPredicted RBP9.96□□□□□ -0.82
GGPS1-203ENST00000391855 BEST4Q8NFU0 473 aa9.96□□□□□ -0.82
GGPS1-203ENST00000391855 RITA1Q96K30 269 aa9.96□□□□□ -0.82
GGPS1-203ENST00000391855 FBXL15Q9H469 300 aa9.96□□□□□ -0.82
GGPS1-203ENST00000391855 PARP11Q9NR21 331 aa9.96□□□□□ -0.82
GGPS1-203ENST00000391855 NUDT19A8MXV4 375 aa9.95□□□□□ -0.82
GGPS1-203ENST00000391855 ATP6V0E1O15342 81 aa9.95□□□□□ -0.82
GGPS1-203ENST00000391855 HLA-DQB1P01920 261 aa9.95□□□□□ -0.82
GGPS1-203ENST00000391855 APOA1P02647 267 aa9.95□□□□□ -0.82
GGPS1-203ENST00000391855 CRIP2P52943 208 aaPredicted RBP9.95□□□□□ -0.82
GGPS1-203ENST00000391855 VBP1P61758 197 aa9.95□□□□□ -0.82
GGPS1-203ENST00000391855 PSG5Q15238 335 aa9.95□□□□□ -0.82
GGPS1-203ENST00000391855 TMEM69Q5SWH9 247 aa9.95□□□□□ -0.82
GGPS1-203ENST00000391855 SAMD5Q5TGI4 173 aa9.95□□□□□ -0.82
GGPS1-203ENST00000391855 WFDC9Q8NEX5 89 aa9.95□□□□□ -0.82
GGPS1-203ENST00000391855 AP3S1Q92572 193 aa9.95□□□□□ -0.82
GGPS1-203ENST00000391855 METTL1Q9UBP6 276 aaKnown RBP9.95□□□□□ -0.82
GGPS1-203ENST00000391855 TRAV41A0A0B4J266 112 aa9.94□□□□□ -0.82
GGPS1-203ENST00000391855 TUSC2O75896 110 aa9.94□□□□□ -0.82
GGPS1-203ENST00000391855 DUS4LO95620 317 aaKnown RBP9.94□□□□□ -0.82
GGPS1-203ENST00000391855 IGKV1-16P04430 117 aa9.94□□□□□ -0.82
GGPS1-203ENST00000391855 CD33P20138 364 aa9.94□□□□□ -0.82
GGPS1-203ENST00000391855 DUTP33316 252 aaKnown RBP9.94□□□□□ -0.82
GGPS1-203ENST00000391855 CDX1P47902 265 aaPredicted RBP9.94□□□□□ -0.82
GGPS1-203ENST00000391855 RORCP51449 518 aa9.94□□□□□ -0.82
GGPS1-203ENST00000391855 DEFA6Q01524 100 aa9.94□□□□□ -0.82
GGPS1-203ENST00000391855 TMEM267Q0VDI3 215 aaPredicted RBP9.94□□□□□ -0.82
GGPS1-203ENST00000391855 MSMO1Q15800 293 aa9.94□□□□□ -0.82
GGPS1-203ENST00000391855 TMEM177Q53S58 311 aa9.94□□□□□ -0.82
GGPS1-203ENST00000391855 GPR141Q7Z602 305 aa9.94□□□□□ -0.82
GGPS1-203ENST00000391855 ZNF695Q8IW36 515 aa9.94□□□□□ -0.82
GGPS1-203ENST00000391855 KLHL30-AS1Q8NEE0 82 aa9.94□□□□□ -0.82
GGPS1-203ENST00000391855 HARBI1Q96MB7 349 aa9.94□□□□□ -0.82
GGPS1-203ENST00000391855 GPR61Q9BZJ8 451 aa9.94□□□□□ -0.82
GGPS1-203ENST00000391855 IFT46Q9NQC8 304 aa9.94□□□□□ -0.82
GGPS1-203ENST00000391855 NECAP2Q9NVZ3 263 aa9.94□□□□□ -0.82
GGPS1-203ENST00000391855 MRPS7Q9Y2R9 242 aaKnown RBP9.94□□□□□ -0.82
GGPS1-203ENST00000391855 CMYA5Q8N3K9 4069 aa9.93□□□□□ -0.82
GGPS1-203ENST00000391855 SMIM31A0A1B0GVY4 71 aa9.93□□□□□ -0.82
GGPS1-203ENST00000391855 NFYAP23511 347 aaPredicted RBP9.93□□□□□ -0.82
GGPS1-203ENST00000391855 PSMB8P28062 276 aa9.93□□□□□ -0.82
GGPS1-203ENST00000391855 PPIFP30405 207 aaKnown RBP9.93□□□□□ -0.82
GGPS1-203ENST00000391855 MYCNOSP40205 109 aa9.93□□□□□ -0.82
GGPS1-203ENST00000391855 ALDH3B2P48448 385 aa9.93□□□□□ -0.82
GGPS1-203ENST00000391855 TAS2R20P59543 309 aa9.93□□□□□ -0.82
GGPS1-203ENST00000391855 CX3CL1P78423 397 aa9.93□□□□□ -0.82
GGPS1-203ENST00000391855 KPRPQ5T749 579 aaPredicted RBP9.93□□□□□ -0.82
GGPS1-203ENST00000391855 PYHIN1Q6K0P9 492 aa9.93□□□□□ -0.82
GGPS1-203ENST00000391855 MZT2AQ6P582 158 aa9.93□□□□□ -0.82
GGPS1-203ENST00000391855 ZNF562Q6V9R5 426 aa9.93□□□□□ -0.82
GGPS1-203ENST00000391855 DDB2Q92466 427 aa9.93□□□□□ -0.82
GGPS1-203ENST00000391855 RBMXL1Q96E39 390 aaKnown RBP9.93□□□□□ -0.82
GGPS1-203ENST00000391855 C5orf30Q96GV9 206 aa9.93□□□□□ -0.82
GGPS1-203ENST00000391855 RBMX2Q9Y388 322 aaKnown RBP9.93□□□□□ -0.82
GGPS1-203ENST00000391855 PRELID3BQ9Y3B1 194 aa9.93□□□□□ -0.82
GGPS1-203ENST00000391855 PKD1L1Q8TDX9 2849 aa9.93□□□□□ -0.82
GGPS1-203ENST00000391855 SHOXO15266 292 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 SLC25A17O43808 307 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 RPLP1P05386 114 aaKnown RBP9.92□□□□□ -0.82
GGPS1-203ENST00000391855 NDPQ00604 133 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 CDK10Q15131 360 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 CTF1Q16619 201 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 VMA21Q3ZAQ7 101 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 TMEM65Q6PI78 240 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 ZNF66Q6ZN08 573 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 KCTD9Q7L273 389 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 OVCH2Q7RTZ1 564 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 PPP1R27Q86WC6 154 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 GVQW1Q8N7I0 195 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 MINDY2Q8NBR6 621 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 ZBTB34Q8NCN2 500 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 BVESQ8NE79 360 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 OR5AP2Q8NGF4 316 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 OSR1Q8TAX0 266 aaPredicted RBP9.92□□□□□ -0.82
GGPS1-203ENST00000391855 MYOZ3Q8TDC0 251 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 ABHD5Q8WTS1 349 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 BORCS5Q969J3 196 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 RCC1LQ96I51 464 aaKnown RBP9.92□□□□□ -0.82
GGPS1-203ENST00000391855 HSD17B10Q99714 261 aaKnown RBP9.92□□□□□ -0.82
GGPS1-203ENST00000391855 COMMD3Q9UBI1 195 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 ANAPC10Q9UM13 185 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 FOXA2Q9Y261 457 aaPredicted RBP9.92□□□□□ -0.82
GGPS1-203ENST00000391855 PLXNB1O43157 2135 aa9.92□□□□□ -0.82
GGPS1-203ENST00000391855 CREBL2O60519 120 aaPredicted RBP9.91□□□□□ -0.82
GGPS1-203ENST00000391855 CA2P00918 260 aa9.91□□□□□ -0.82
GGPS1-203ENST00000391855 IGLV1-40P01703 118 aa9.91□□□□□ -0.82
GGPS1-203ENST00000391855 FCGR2CP31995 323 aa9.91□□□□□ -0.82
GGPS1-203ENST00000391855 PRSS3P35030 304 aa9.91□□□□□ -0.82
GGPS1-203ENST00000391855 LINC00205P59089 165 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms