RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 RAB22AQ9UL26 194 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 V9GY05 133 aa11.38□□□□□ -0.59
HDAC6-204ENST00000376643 A0A0A6YYD4 124 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 H0Y980 276 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 M0R1X1 148 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 FCN1O00602 326 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 DENRO43583 198 aaKnown RBP11.37□□□□□ -0.59
HDAC6-204ENST00000376643 RGS10O43665 173 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 CREBL2O60519 120 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-204ENST00000376643 IGHV3-11P01762 117 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 SCTP09683 121 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 FRMD6-AS1P0C7T7 363 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 EGR2P11161 476 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-204ENST00000376643 VEGFCP49767 419 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 IRF3Q14653 427 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 C5orf24Q7Z6I8 188 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 ZNF383Q8NA42 475 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 OR10J5Q8NHC4 309 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 FAM3DQ96BQ1 224 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 RBMXL1Q96E39 390 aaKnown RBP11.37□□□□□ -0.59
HDAC6-204ENST00000376643 ARHGAP5-AS1Q96IT6 56 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 ADTRPQ96IZ2 230 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 MS4A10Q96PG2 267 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 FAM103A1Q9BTL3 118 aaKnown RBP11.37□□□□□ -0.59
HDAC6-204ENST00000376643 PECRQ9BY49 303 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 VCX3BQ9H321 246 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 PALMDQ9NP74 551 aa11.37□□□□□ -0.59
HDAC6-204ENST00000376643 AK6Q9Y3D8 172 aaKnown RBP11.37□□□□□ -0.59
HDAC6-204ENST00000376643 FOXI3A8MTJ6 420 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-204ENST00000376643 LDLRAD4O15165 306 aa11.36□□□□□ -0.59
HDAC6-204ENST00000376643 FABP7O15540 132 aa11.36□□□□□ -0.59
HDAC6-204ENST00000376643 SLC25A17O43808 307 aa11.36□□□□□ -0.59
HDAC6-204ENST00000376643 IGKV1-16P04430 117 aa11.36□□□□□ -0.59
HDAC6-204ENST00000376643 CALRP27797 417 aaKnown RBP11.36□□□□□ -0.59
HDAC6-204ENST00000376643 FAM209BQ5JX69 171 aa11.36□□□□□ -0.59
HDAC6-204ENST00000376643 SBSPONQ8IVN8 264 aa11.36□□□□□ -0.59
HDAC6-204ENST00000376643 DRAXINQ8NBI3 349 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-204ENST00000376643 RAB3CQ96E17 227 aa11.36□□□□□ -0.59
HDAC6-204ENST00000376643 USMG5Q96IX5 58 aa11.36□□□□□ -0.59
HDAC6-204ENST00000376643 HARBI1Q96MB7 349 aa11.36□□□□□ -0.59
HDAC6-204ENST00000376643 HDHD3Q9BSH5 251 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-204ENST00000376643 RSRP1Q9BUV0 290 aa11.36□□□□□ -0.59
HDAC6-204ENST00000376643 PARP12Q9H0J9 701 aaKnown RBP11.36□□□□□ -0.59
HDAC6-204ENST00000376643 KCNK15Q9H427 330 aa11.36□□□□□ -0.59
HDAC6-204ENST00000376643 BLOC1S6Q9UL45 172 aa11.36□□□□□ -0.59
HDAC6-204ENST00000376643 RBM7Q9Y580 266 aaKnown RBP11.36□□□□□ -0.59
HDAC6-204ENST00000376643 METTL21EPA6NDL7 271 aa11.35□□□□□ -0.59
HDAC6-204ENST00000376643 A8MZ25 164 aa11.35□□□□□ -0.59
HDAC6-204ENST00000376643 VMA21Q3ZAQ7 101 aa11.35□□□□□ -0.59
HDAC6-204ENST00000376643 PRSS48Q7RTY5 328 aa11.35□□□□□ -0.59
HDAC6-204ENST00000376643 CASTOR1Q8WTX7 329 aa11.35□□□□□ -0.59
HDAC6-204ENST00000376643 GINS4Q9BRT9 223 aa11.35□□□□□ -0.59
HDAC6-204ENST00000376643 CABLES2Q9BTV7 478 aa11.35□□□□□ -0.59
HDAC6-204ENST00000376643 OR2D2Q9H210 308 aa11.35□□□□□ -0.59
HDAC6-204ENST00000376643 DUSP21Q9H596 190 aa11.35□□□□□ -0.59
HDAC6-204ENST00000376643 STAB2Q8WWQ8 2551 aa11.34□□□□□ -0.59
HDAC6-204ENST00000376643 SHOXO15266 292 aa11.34□□□□□ -0.59
HDAC6-204ENST00000376643 IGLV1-51P01701 117 aa11.34□□□□□ -0.59
HDAC6-204ENST00000376643 LYL1P12980 280 aa11.34□□□□□ -0.59
HDAC6-204ENST00000376643 MYL9P24844 172 aa11.34□□□□□ -0.59
HDAC6-204ENST00000376643 TALDO1P37837 337 aa11.34□□□□□ -0.59
HDAC6-204ENST00000376643 TMEM50BP56557 158 aa11.34□□□□□ -0.59
HDAC6-204ENST00000376643 RPS25P62851 125 aaKnown RBP11.34□□□□□ -0.59
HDAC6-204ENST00000376643 SSX1Q16384 188 aa11.34□□□□□ -0.59
HDAC6-204ENST00000376643 SRSF7Q16629 238 aaKnown RBP eCLIP11.34□□□□□ -0.59
HDAC6-204ENST00000376643 C2orf76Q3KRA6 126 aa11.34□□□□□ -0.59
HDAC6-204ENST00000376643 TMEM91Q6ZNR0 172 aa11.34□□□□□ -0.59
HDAC6-204ENST00000376643 OVCH2Q7RTZ1 564 aa11.34□□□□□ -0.59
HDAC6-204ENST00000376643 GTSCR1Q86UQ5 136 aa11.34□□□□□ -0.59
HDAC6-204ENST00000376643 PHB2Q99623 299 aa11.34□□□□□ -0.59
HDAC6-204ENST00000376643 MGLLQ99685 303 aa11.34□□□□□ -0.59
HDAC6-204ENST00000376643 CCDC90BQ9GZT6 254 aa11.34□□□□□ -0.59
HDAC6-204ENST00000376643 TRBV6-7A0A0A0MS04 114 aa11.33□□□□□ -0.6
HDAC6-204ENST00000376643 A0A0B4J203 849 aa11.33□□□□□ -0.6
HDAC6-204ENST00000376643 BET1O15155 118 aa11.33□□□□□ -0.6
HDAC6-204ENST00000376643 ACTL6BO94805 426 aa11.33□□□□□ -0.6
HDAC6-204ENST00000376643 FCGR3AP08637 254 aa11.33□□□□□ -0.6
HDAC6-204ENST00000376643 RAB6AP20340 208 aa11.33□□□□□ -0.6
HDAC6-204ENST00000376643 HSPA13P48723 471 aa11.33□□□□□ -0.6
HDAC6-204ENST00000376643 TMEM177Q53S58 311 aa11.33□□□□□ -0.6
HDAC6-204ENST00000376643 CASC10Q5T4H9 136 aa11.33□□□□□ -0.6
HDAC6-204ENST00000376643 LCN12Q6JVE5 192 aa11.33□□□□□ -0.6
HDAC6-204ENST00000376643 TEX45Q8NA69 505 aa11.33□□□□□ -0.6
HDAC6-204ENST00000376643 OR9G4Q8NGQ1 327 aa11.33□□□□□ -0.6
HDAC6-204ENST00000376643 CYYR1Q96J86 154 aa11.33□□□□□ -0.6
HDAC6-204ENST00000376643 CITED4Q96RK1 184 aa11.33□□□□□ -0.6
HDAC6-204ENST00000376643 TINAGL1Q9GZM7 467 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-204ENST00000376643 PEMTQ9UBM1 199 aa11.33□□□□□ -0.6
HDAC6-204ENST00000376643 TRAV1-2A0A0B4J238 106 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 IGKV1-6A0A0C4DH72 117 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 TRIM64CA6NLI5 447 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 MPPED1O15442 326 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 AIREO43918 545 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 PROP1O75360 226 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 SLC22A5O76082 557 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 IGHV4-30-4P0DP06 118 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 KLF5Q13887 457 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-204ENST00000376643 RPEL1Q2QD12 228 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 PLAC9Q5JTB6 97 aa11.32□□□□□ -0.6
HDAC6-204ENST00000376643 Q6ZS49 121 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms