RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PNKDQ8N490 385 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 WFDC11Q8NEX6 87 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 OR4P4Q8NGL7 312 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 SEC22CQ9BRL7 303 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 AIFM2Q9BRQ8 373 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 BEX2Q9BXY8 128 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 BEX1Q9HBH7 125 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 RAB18Q9NP72 206 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 SIRT7Q9NRC8 400 aa10.52□□□□□ -0.73
LSM8-201ENST00000249299 CSMD2Q7Z408 3487 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 CCDC168Q8NDH2 2452 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 A0A1B0GVG6 124 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 RNASEK-C17orf49H0YIS7 233 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 M0R1X1 148 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 SSNA1O43805 119 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 OR5AC1P0C628 307 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 HOXB4P17483 251 aaPredicted RBP10.51□□□□□ -0.73
LSM8-201ENST00000249299 ARHGDIBP52566 201 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 LGALS4P56470 323 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 UTF1Q5T230 341 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 LIN54Q6MZP7 749 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 TGIF2LXQ8IUE1 241 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 OR5AN1Q8NGI8 311 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 DDB2Q92466 427 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 RBPMSQ93062 196 aaKnown RBP10.51□□□□□ -0.73
LSM8-201ENST00000249299 MALSU1Q96EH3 234 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 C5orf30Q96GV9 206 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 C7orf69Q9H7B7 122 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 PLEKHA2Q9HB19 425 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 TMED3Q9Y3Q3 217 aa10.51□□□□□ -0.73
LSM8-201ENST00000249299 PRRC2AP48634 2157 aaKnown RBP10.5□□□□□ -0.73
LSM8-201ENST00000249299 TGFAP01135 160 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 IGHV3-7P01780 117 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 ARG1P05089 322 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 SULT1A3P0DMM9 295 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 SULT1A4P0DMN0 295 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 COX7A1P24310 79 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 RAB13P51153 203 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 RTL8BQ17RB0 113 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 RPL39P5Q59GN2 51 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 FAM219AQ8IW50 185 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 OR52B4Q8NGK2 314 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 OR51H1Q8NH63 302 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 OR4S2Q8NH73 311 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 TCTEX1D2Q8WW35 142 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 RPEQ96AT9 228 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 TP53RKQ96S44 253 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 RNF5Q99942 180 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 COMMD9Q9P000 198 aa10.5□□□□□ -0.73
LSM8-201ENST00000249299 NOTCH2Q04721 2471 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 CENPVL3A0A0U1RRI6 287 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 A0A1W2PPE3 182 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 LINC00473A8K010 186 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 TNFSF12O43508 249 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 HPRT1P00492 218 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 IFNA21P01568 189 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 APOA2P02652 100 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 CT45A6P0DMU7 189 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 CT45A5P0DMU8 189 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 CT45A7P0DMV0 189 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 SLC25A6P12236 298 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 VDAC1P21796 283 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 RPL30P62888 115 aaKnown RBP10.49□□□□□ -0.73
LSM8-201ENST00000249299 HABP2Q14520 560 aaPredicted RBP10.49□□□□□ -0.73
LSM8-201ENST00000249299 SLC9A3R2Q15599 337 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 ANKRD55Q3KP44 614 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 ZNF585BQ52M93 769 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 TPTE2P1Q5T6R2 138 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 GPR157Q5UAW9 335 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 PDPNQ86YL7 162 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 ZNF695Q8IW36 515 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 SPAG16Q8N0X2 631 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 CASTOR1Q8WTX7 329 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 LSM10Q969L4 123 aaKnown RBP10.49□□□□□ -0.73
LSM8-201ENST00000249299 C18orf12Q96KH6 178 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 NABP2Q9BQ15 211 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 CACFD1Q9UGQ2 172 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 MAP1AP78559 2803 aaPredicted RBP10.49□□□□□ -0.73
LSM8-201ENST00000249299 MED13LQ71F56 2210 aa10.49□□□□□ -0.73
LSM8-201ENST00000249299 IGHV1-69DA0A0B4J2H0 117 aa10.48□□□□□ -0.73
LSM8-201ENST00000249299 OR2A4O95047 310 aa10.48□□□□□ -0.73
LSM8-201ENST00000249299 IGHV1-69P01742 117 aa10.48□□□□□ -0.73
LSM8-201ENST00000249299 CYCSP99999 105 aaKnown RBP10.48□□□□□ -0.73
LSM8-201ENST00000249299 SRSF4Q08170 494 aaKnown RBP10.48□□□□□ -0.73
LSM8-201ENST00000249299 ZNF383Q8NA42 475 aa10.48□□□□□ -0.73
LSM8-201ENST00000249299 OSR1Q8TAX0 266 aaPredicted RBP10.48□□□□□ -0.73
LSM8-201ENST00000249299 LHX4Q969G2 390 aa10.48□□□□□ -0.73
LSM8-201ENST00000249299 OR2A7Q96R45 310 aa10.48□□□□□ -0.73
LSM8-201ENST00000249299 hCG_2014768A0A024R1R8 64 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 FAM90A9PA6NNJ1 464 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 VGLL3A8MV65 326 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 H0YJW9 148 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 NPFFO15130 113 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 FGF2P09038 288 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 CD1BP29016 333 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 LGALS7P47929 136 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 BRWD1-AS2P59051 145 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 POU2AF1Q16633 256 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 SP6Q3SY56 376 aa10.47□□□□□ -0.73
LSM8-201ENST00000249299 TMEM268Q5VZI3 342 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms