RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 OR51M1Q9H341 326 aa20.85■□□□□ 0.93
RUNDC3A-201ENST00000225441 RBKSQ9H477 322 aa20.85■□□□□ 0.93
RUNDC3A-201ENST00000225441 ITPR1Q14643 2758 aa20.85■□□□□ 0.93
RUNDC3A-201ENST00000225441 TRAV39A0A0B4J263 110 aa20.84■□□□□ 0.93
RUNDC3A-201ENST00000225441 RAB29O14966 203 aa20.84■□□□□ 0.93
RUNDC3A-201ENST00000225441 CDX1P47902 265 aaPredicted RBP20.84■□□□□ 0.93
RUNDC3A-201ENST00000225441 RAB11AP62491 216 aa20.84■□□□□ 0.93
RUNDC3A-201ENST00000225441 MYPOPQ86VE0 399 aaPredicted RBP20.84■□□□□ 0.93
RUNDC3A-201ENST00000225441 KLF14Q8TD94 323 aaPredicted RBP20.84■□□□□ 0.93
RUNDC3A-201ENST00000225441 NINJ1Q92982 152 aa20.84■□□□□ 0.93
RUNDC3A-201ENST00000225441 TMEM147Q9BVK8 224 aa20.84■□□□□ 0.93
RUNDC3A-201ENST00000225441 MAP1LC3B2A6NCE7 125 aa20.83■□□□□ 0.93
RUNDC3A-201ENST00000225441 LRRC30A6NM36 301 aa20.83■□□□□ 0.93
RUNDC3A-201ENST00000225441 ZNF727A8MUV8 499 aa20.83■□□□□ 0.93
RUNDC3A-201ENST00000225441 C12orf77C9JDV5 145 aa20.83■□□□□ 0.93
RUNDC3A-201ENST00000225441 CLDN34H7C241 214 aa20.83■□□□□ 0.93
RUNDC3A-201ENST00000225441 CLDN14O95500 239 aa20.83■□□□□ 0.93
RUNDC3A-201ENST00000225441 FBP1P09467 338 aa20.83■□□□□ 0.93
RUNDC3A-201ENST00000225441 KITLGP21583 273 aa20.83■□□□□ 0.93
RUNDC3A-201ENST00000225441 SFXN3Q9BWM7 321 aa20.83■□□□□ 0.93
RUNDC3A-201ENST00000225441 MAP1LC3BQ9GZQ8 125 aa20.83■□□□□ 0.93
RUNDC3A-201ENST00000225441 OPN3Q9H1Y3 402 aaPredicted RBP20.83■□□□□ 0.93
RUNDC3A-201ENST00000225441 SDF2L1Q9HCN8 221 aa20.83■□□□□ 0.93
RUNDC3A-201ENST00000225441 PKD1L2Q7Z442 2459 aa20.83■□□□□ 0.93
RUNDC3A-201ENST00000225441 ESPL1Q14674 2120 aa20.83■□□□□ 0.92
RUNDC3A-201ENST00000225441 MAP1BP46821 2468 aaKnown RBP20.83■□□□□ 0.92
RUNDC3A-201ENST00000225441 SOX15O60248 233 aa20.83■□□□□ 0.92
RUNDC3A-201ENST00000225441 IGKV3-15P01624 115 aa20.83■□□□□ 0.92
RUNDC3A-201ENST00000225441 GRPP07492 148 aa20.83■□□□□ 0.92
RUNDC3A-201ENST00000225441 COX5AP20674 150 aa20.83■□□□□ 0.92
RUNDC3A-201ENST00000225441 OR3A1P47881 315 aa20.83■□□□□ 0.92
RUNDC3A-201ENST00000225441 LCN15Q6UWW0 184 aa20.83■□□□□ 0.92
RUNDC3A-201ENST00000225441 ZNF665Q9H7R5 613 aa20.83■□□□□ 0.92
RUNDC3A-201ENST00000225441 OBP2BQ9NPH6 170 aa20.83■□□□□ 0.92
RUNDC3A-201ENST00000225441 CLN5O75503 358 aa20.82■□□□□ 0.92
RUNDC3A-201ENST00000225441 HOXC12P31275 282 aa20.82■□□□□ 0.92
RUNDC3A-201ENST00000225441 ZNF674Q2M3X9 581 aa20.82■□□□□ 0.92
RUNDC3A-201ENST00000225441 ACP7Q6ZNF0 438 aa20.82■□□□□ 0.92
RUNDC3A-201ENST00000225441 C11orf53Q8IXP5 236 aa20.82■□□□□ 0.92
RUNDC3A-201ENST00000225441 C1orf87Q8N0U7 546 aa20.82■□□□□ 0.92
RUNDC3A-201ENST00000225441 SLC39A9Q9NUM3 307 aa20.82■□□□□ 0.92
RUNDC3A-201ENST00000225441 SH3BGRL2Q9UJC5 107 aa20.82■□□□□ 0.92
RUNDC3A-201ENST00000225441 ZFP92A6NM28 416 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 PSPNO60542 156 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 LYZL6O75951 148 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 CLDN1O95832 211 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 FABP1P07148 127 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 SLC16A13Q7RTY0 426 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 ST6GALNAC3Q8NDV1 305 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 OR1L1Q8NH94 360 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 OR2D2Q9H210 308 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 NIT2Q9NQR4 276 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 HBZP02008 142 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 OPN1MWP04001 364 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 OPN1MW2P0DN77 364 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 OPN1MW3P0DN78 364 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 ALKBH6Q3KRA9 238 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 HSD17B10Q99714 261 aaKnown RBP20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 VSIRQ9H7M9 311 aa20.81■□□□□ 0.92
RUNDC3A-201ENST00000225441 ELOA3CA0A087WX78 387 aaPredicted RBP20.8■□□□□ 0.92
RUNDC3A-201ENST00000225441 A0A1B0GWJ7 208 aa20.8■□□□□ 0.92
RUNDC3A-201ENST00000225441 TMEM250H0YL14 139 aa20.8■□□□□ 0.92
RUNDC3A-201ENST00000225441 CXCL1P09341 107 aa20.8■□□□□ 0.92
RUNDC3A-201ENST00000225441 ERVFRD-1P60508 538 aa20.8■□□□□ 0.92
RUNDC3A-201ENST00000225441 ERVS71-1P61550 626 aa20.8■□□□□ 0.92
RUNDC3A-201ENST00000225441 VWC2Q2TAL6 325 aa20.8■□□□□ 0.92
RUNDC3A-201ENST00000225441 BEND4Q6ZU67 534 aa20.8■□□□□ 0.92
RUNDC3A-201ENST00000225441 GSN-AS1Q9NRJ2 163 aa20.8■□□□□ 0.92
RUNDC3A-201ENST00000225441 TRBV24-1A0A075B6N3 115 aa20.79■□□□□ 0.92
RUNDC3A-201ENST00000225441 CTXND1A0A1B0GTU2 59 aa20.79■□□□□ 0.92
RUNDC3A-201ENST00000225441 HTD2P86397 168 aa20.79■□□□□ 0.92
RUNDC3A-201ENST00000225441 SMIM21Q3B7S5 101 aa20.79■□□□□ 0.92
RUNDC3A-201ENST00000225441 LHX4Q969G2 390 aa20.79■□□□□ 0.92
RUNDC3A-201ENST00000225441 NAT8Q9UHE5 227 aa20.79■□□□□ 0.92
RUNDC3A-201ENST00000225441 FAM90A9PA6NNJ1 464 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 SEC14L6B5MCN3 397 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 C3orf80F5H4A9 247 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 ACACBO00763 2458 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 MLNRO43193 412 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 ZNF737O75373 536 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 ADH4P08319 380 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 MPV17P39210 176 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 P2RY6Q15077 328 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 OR10P1Q8NGE3 313 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 MANBALQ9NQG1 85 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 A0A0G2JNJ9 132 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 UBE2L5PA0A1B0GUS4 154 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 GNB2P62879 340 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 CXorf67Q86X51 503 aaPredicted RBP20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 FAM210BQ96KR6 192 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 Q9UFV3 132 aa20.78■□□□□ 0.92
RUNDC3A-201ENST00000225441 ODAMA1E959 279 aa20.77■□□□□ 0.92
RUNDC3A-201ENST00000225441 CEBPZOSA8MTT3 80 aa20.77■□□□□ 0.92
RUNDC3A-201ENST00000225441 FAM169BQ8N8A8 192 aa20.77■□□□□ 0.92
RUNDC3A-201ENST00000225441 COQ2Q96H96 371 aa20.77■□□□□ 0.92
RUNDC3A-201ENST00000225441 DOK5Q9P104 306 aa20.77■□□□□ 0.92
RUNDC3A-201ENST00000225441 ZGRF1Q86YA3 2104 aa20.77■□□□□ 0.91
RUNDC3A-201ENST00000225441 PMS2P5A8MQ11 134 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 PSMB3P49720 205 aa20.76■□□□□ 0.91
RUNDC3A-201ENST00000225441 RPL30P62888 115 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms