RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Rab32Q9CZE3 223 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Asxl3Q8C4A5 2259 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Sec16aA2AIX1 2377 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Gm13547A2ARC0 163 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Zfp764E9QAP1 431 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Hist1h3bP84228 136 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 F13bQ07968 669 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Prss38Q3UKY7 322 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Olfr1341Q7TQV4 312 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Vmn1r89Q8R256 316 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Vmn1r36Q8R2E3 305 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Olfr1412Q8VET3 321 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 DohhQ99LN9 302 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Zdhhc4Q9D6H5 343 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Aig1Q9D8B1 262 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Cpn1Q9JJN5 457 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Adamts20P59511 1906 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Gm17657E9PWY5 170 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Zfand5O88878 213 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Gm10881P01642 115 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Kat7Q5SVQ0 613 aaKnown RBP14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 SargQ8BI29 606 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Plekha3Q9ERS4 297 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Tbl1xQ9QXE7 527 aa14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 Arpc1bQ9WV32 372 aaKnown RBP14.09□□□□□ -0.15
Trim28-201ENSMUST00000005705 A0A286YCQ8 80 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 A0A286YD13 301 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Atf1P81269 269 aaKnown RBP14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Mcrip1Q3UGS4 97 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr774Q7TRI5 312 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 NelfaQ8BG30 530 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr52Q8VFL0 319 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr1427Q8VFU9 311 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Q8WUR0 141 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Zfpl1Q9DB43 310 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Mageh1Q9NWG9 218 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Tex38A2A8T7 201 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Slc18b1D3Z5L6 459 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr913E9Q716 312 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Adh1P00329 375 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Defa-rs1P17533 116 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Il18P70380 192 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 UevldQ3U1V6 471 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Gfod1Q3UHD2 390 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 PcolceQ61398 468 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Fbxo27Q6DIA9 280 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Slc35e3Q6PGC7 313 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Etfrf1Q91V16 86 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Ms4a6dQ99N07 247 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Atg101Q9D8Z6 218 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Rbfox1Q9JJ43 396 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Fbp1Q9QXD6 338 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Cldn15Q9Z0S5 227 aa14.08□□□□□ -0.16
Trim28-201ENSMUST00000005705 Ighv6-4A0A0A6YX19 119 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr1490A0A1L1SVH0 321 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr740E9PV79 311 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr231E9Q0M4 307 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 A630095N17RikJ3KMM7 116 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Igk-V19-17P01633 149 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 P01881 257 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Upk2P38575 184 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Gm525Q3V3I5 90 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Trav8d-1Q5R1H8 112 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Nxph2Q61199 261 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr802Q8VGJ2 312 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 UmodQ91X17 642 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Atoh7Q9Z2E5 149 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Ighv5-15A0A0A6YWC7 117 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Zdhhc22A0PK84 263 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 EndogO08600 294 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Dnase2P56542 353 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Bahd1Q497V6 772 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Rnase11Q5GAM9 192 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Foxg1Q60987 481 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Zic4Q61467 341 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Klk1b21Q61759 261 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Pla2g16Q8R3U1 162 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Acaa1bQ8VCH0 424 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr1451Q8VFX5 310 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Acaa1aQ921H8 424 aaKnown RBP14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Sdf2l1Q9ESP1 221 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Col4a2P08122 1707 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Fthl17bA2AHC5 176 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Fthl17cA2AHC6 176 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Fut1O09160 376 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Tlx3O55144 291 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Npbwr1P49681 329 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Fthl17fQ3SXD2 176 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Olfr876Q7TRE4 310 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Mansc1Q9CR33 414 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Ppp1r35Q9D8C8 260 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 EdarQ9R187 448 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Armcx4E9PWM3 2356 aa14.07□□□□□ -0.16
Trim28-201ENSMUST00000005705 Gm12790B1AUV6 201 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Gm9772F6XPD8 135 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 2010315B03RikJ3QK55 433 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Fosl2P47930 326 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Zfp729aQ4QQP3 973 aa14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Tra2aQ6PFR5 281 aaKnown RBP14.06□□□□□ -0.16
Trim28-201ENSMUST00000005705 Cmc2Q8K199 79 aa14.06□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 66.7 ms