RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 PITPNAQ00169 270 aa13.67□□□□□ -0.22
PHGDH-227ENST00000641811 CD83Q01151 205 aa13.67□□□□□ -0.22
PHGDH-227ENST00000641811 GPR107Q5VW38 600 aa13.67□□□□□ -0.22
PHGDH-227ENST00000641811 SAMD12Q8N8I0 201 aa13.67□□□□□ -0.22
PHGDH-227ENST00000641811 OR2D2Q9H210 308 aa13.67□□□□□ -0.22
PHGDH-227ENST00000641811 DCSTAMPQ9H295 470 aa13.67□□□□□ -0.22
PHGDH-227ENST00000641811 AUNIPQ9H7T9 357 aa13.67□□□□□ -0.22
PHGDH-227ENST00000641811 DIABLOQ9NR28 239 aa13.67□□□□□ -0.22
PHGDH-227ENST00000641811 MEGF8Q7Z7M0 2845 aa13.66□□□□□ -0.22
PHGDH-227ENST00000641811 PSMB11A5LHX3 300 aa13.66□□□□□ -0.22
PHGDH-227ENST00000641811 J3QRK9 145 aa13.66□□□□□ -0.22
PHGDH-227ENST00000641811 M0R1X1 148 aa13.66□□□□□ -0.22
PHGDH-227ENST00000641811 TMEM127O75204 238 aa13.66□□□□□ -0.22
PHGDH-227ENST00000641811 DIRAS3O95661 229 aa13.66□□□□□ -0.22
PHGDH-227ENST00000641811 TFAP2AP05549 437 aa13.66□□□□□ -0.22
PHGDH-227ENST00000641811 NDUFA11Q86Y39 141 aa13.66□□□□□ -0.22
PHGDH-227ENST00000641811 ANKRD13BQ86YJ7 626 aa13.66□□□□□ -0.22
PHGDH-227ENST00000641811 H1FOOQ8IZA3 346 aaPredicted RBP13.66□□□□□ -0.22
PHGDH-227ENST00000641811 GVQW1Q8N7I0 195 aa13.66□□□□□ -0.22
PHGDH-227ENST00000641811 ZNF383Q8NA42 475 aa13.66□□□□□ -0.22
PHGDH-227ENST00000641811 C5orf30Q96GV9 206 aa13.66□□□□□ -0.22
PHGDH-227ENST00000641811 A0A0A6YYH2 397 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 TCRBV4S1A1TA0A5B7 111 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 OR5H14A6NHG9 310 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 A6NJ64 397 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 H7C2Y5 167 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 NBR2O15453 112 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 FCER2P06734 321 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 SOX6P35712 828 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 ALDH3B2P48448 385 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 CTF1Q16619 201 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 UBE2NLQ5JXB2 153 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 FOXRED2Q8IWF2 684 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 STPG2Q8N412 459 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 OR5AN1Q8NGI8 311 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 CHPT1Q8WUD6 406 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 SDHAF2Q9NX18 166 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 WASHC3Q9Y3C0 194 aa13.65□□□□□ -0.22
PHGDH-227ENST00000641811 RBM7Q9Y580 266 aaKnown RBP13.65□□□□□ -0.22
PHGDH-227ENST00000641811 XRCC3O43542 346 aa13.64□□□□□ -0.23
PHGDH-227ENST00000641811 GABARAPO95166 117 aa13.64□□□□□ -0.23
PHGDH-227ENST00000641811 NFYAP23511 347 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-227ENST00000641811 MC5RP33032 325 aa13.64□□□□□ -0.23
PHGDH-227ENST00000641811 CNIH2Q6PI25 160 aa13.64□□□□□ -0.23
PHGDH-227ENST00000641811 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-227ENST00000641811 NPBQ8NG41 125 aa13.64□□□□□ -0.23
PHGDH-227ENST00000641811 OR4X2Q8NGF9 303 aa13.64□□□□□ -0.23
PHGDH-227ENST00000641811 R3HDM4Q96D70 268 aa13.64□□□□□ -0.23
PHGDH-227ENST00000641811 S100A16Q96FQ6 103 aaKnown RBP13.64□□□□□ -0.23
PHGDH-227ENST00000641811 COMMD3Q9UBI1 195 aa13.64□□□□□ -0.23
PHGDH-227ENST00000641811 ZNF107Q9UII5 783 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-227ENST00000641811 ANXA10Q9UJ72 324 aa13.64□□□□□ -0.23
PHGDH-227ENST00000641811 MEIS3P1A6NDR6 274 aa13.63□□□□□ -0.23
PHGDH-227ENST00000641811 AP4M1O00189 453 aa13.63□□□□□ -0.23
PHGDH-227ENST00000641811 IGKV1-16P04430 117 aa13.63□□□□□ -0.23
PHGDH-227ENST00000641811 EIF4EP06730 217 aaKnown RBP13.63□□□□□ -0.23
PHGDH-227ENST00000641811 C5orf64Q2M2E5 130 aa13.63□□□□□ -0.23
PHGDH-227ENST00000641811 KHDC1LQ5JSQ8 128 aa13.63□□□□□ -0.23
PHGDH-227ENST00000641811 GPR141Q7Z602 305 aa13.63□□□□□ -0.23
PHGDH-227ENST00000641811 BEST4Q8NFU0 473 aa13.63□□□□□ -0.23
PHGDH-227ENST00000641811 KCTD12Q96CX2 325 aaKnown RBP13.63□□□□□ -0.23
PHGDH-227ENST00000641811 FBXL15Q9H469 300 aa13.63□□□□□ -0.23
PHGDH-227ENST00000641811 CMYA5Q8N3K9 4069 aa13.63□□□□□ -0.23
PHGDH-227ENST00000641811 KCNAB3O43448 404 aa13.62□□□□□ -0.23
PHGDH-227ENST00000641811 NDUFA3O95167 84 aa13.62□□□□□ -0.23
PHGDH-227ENST00000641811 OPN1MWP04001 364 aa13.62□□□□□ -0.23
PHGDH-227ENST00000641811 CTXN2P0C2S0 81 aa13.62□□□□□ -0.23
PHGDH-227ENST00000641811 OPN1MW2P0DN77 364 aa13.62□□□□□ -0.23
PHGDH-227ENST00000641811 OPN1MW3P0DN78 364 aa13.62□□□□□ -0.23
PHGDH-227ENST00000641811 HOGA1Q86XE5 327 aa13.62□□□□□ -0.23
PHGDH-227ENST00000641811 KIAA1456Q9P272 454 aa13.62□□□□□ -0.23
PHGDH-227ENST00000641811 GAB2Q9UQC2 676 aa13.62□□□□□ -0.23
PHGDH-227ENST00000641811 TSSC4Q9Y5U2 329 aaPredicted RBP13.62□□□□□ -0.23
PHGDH-227ENST00000641811 IGKV1D-13A0A0B4J2D9 117 aa13.61□□□□□ -0.23
PHGDH-227ENST00000641811 FCN1O00602 326 aa13.61□□□□□ -0.23
PHGDH-227ENST00000641811 RRHO14718 337 aa13.61□□□□□ -0.23
PHGDH-227ENST00000641811 HLA-DRB1P01911 266 aa13.61□□□□□ -0.23
PHGDH-227ENST00000641811 APOA2P02652 100 aa13.61□□□□□ -0.23
PHGDH-227ENST00000641811 IGKV1-13P0DP09 117 aa13.61□□□□□ -0.23
PHGDH-227ENST00000641811 RORCP51449 518 aa13.61□□□□□ -0.23
PHGDH-227ENST00000641811 TAS2R20P59543 309 aa13.61□□□□□ -0.23
PHGDH-227ENST00000641811 RPS16P62249 146 aaKnown RBP13.61□□□□□ -0.23
PHGDH-227ENST00000641811 SLC35B1P78383 322 aa13.61□□□□□ -0.23
PHGDH-227ENST00000641811 TMEM69Q5SWH9 247 aa13.61□□□□□ -0.23
PHGDH-227ENST00000641811 LIN54Q6MZP7 749 aa13.61□□□□□ -0.23
PHGDH-227ENST00000641811 LCNL1Q6ZST4 164 aa13.61□□□□□ -0.23
PHGDH-227ENST00000641811 SLC35D1Q9NTN3 355 aa13.61□□□□□ -0.23
PHGDH-227ENST00000641811 OR2W1Q9Y3N9 320 aa13.61□□□□□ -0.23
PHGDH-227ENST00000641811 IGHV7-81A0A0B4J1V7 117 aa13.6□□□□□ -0.23
PHGDH-227ENST00000641811 HPGDSO60760 199 aa13.6□□□□□ -0.23
PHGDH-227ENST00000641811 RBBP9O75884 186 aa13.6□□□□□ -0.23
PHGDH-227ENST00000641811 HLA-DQB1P01920 261 aa13.6□□□□□ -0.23
PHGDH-227ENST00000641811 LUMP51884 338 aaPredicted RBP13.6□□□□□ -0.23
PHGDH-227ENST00000641811 ARPC4P59998 168 aa13.6□□□□□ -0.23
PHGDH-227ENST00000641811 PLGLAQ15195 96 aa13.6□□□□□ -0.23
PHGDH-227ENST00000641811 PSG5Q15238 335 aa13.6□□□□□ -0.23
PHGDH-227ENST00000641811 C18orf65Q6ZTR6 163 aa13.6□□□□□ -0.23
PHGDH-227ENST00000641811 OR4F17Q8NGA8 305 aa13.6□□□□□ -0.23
PHGDH-227ENST00000641811 SNAPC3Q92966 411 aa13.6□□□□□ -0.23
PHGDH-227ENST00000641811 OR4F4Q96R69 305 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms