RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 ZNF567Q8N184 647 aa1.42□□□□□ -2.18
CCDC7-216ENST00000640058 ATP6V1C2Q8NEY4 427 aa1.42□□□□□ -2.18
CCDC7-216ENST00000640058 TEX47Q8TBZ9 253 aa1.42□□□□□ -2.18
CCDC7-216ENST00000640058 C7orf50Q9BRJ6 194 aaKnown RBP1.42□□□□□ -2.18
CCDC7-216ENST00000640058 DCUN1D5Q9BTE7 237 aa1.42□□□□□ -2.18
CCDC7-216ENST00000640058 UPF3BQ9BZI7 483 aaKnown RBP1.42□□□□□ -2.18
CCDC7-216ENST00000640058 OR51B6Q9H340 312 aa1.42□□□□□ -2.18
CCDC7-216ENST00000640058 SMDT1Q9H4I9 107 aa1.42□□□□□ -2.18
CCDC7-216ENST00000640058 C11orf1Q9H5F2 150 aa1.42□□□□□ -2.18
CCDC7-216ENST00000640058 TUBA4BQ9H853 241 aa1.42□□□□□ -2.18
CCDC7-216ENST00000640058 USE1Q9NZ43 259 aa1.42□□□□□ -2.18
CCDC7-216ENST00000640058 PAIP2BQ9ULR5 123 aaKnown RBP1.42□□□□□ -2.18
CCDC7-216ENST00000640058 TP53TG1Q9Y2A0 90 aa1.42□□□□□ -2.18
CCDC7-216ENST00000640058 FHAD1B1AJZ9 1412 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 TENM1Q9UKZ4 2725 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 FABP12A6NFH5 140 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 E5RI56 91 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 K7EQS6 105 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 NSA2O95478 260 aaKnown RBP1.41□□□□□ -2.18
CCDC7-216ENST00000640058 IFNA14P01570 189 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 TNNC2P02585 160 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 IL6P05231 212 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 CRYGDP07320 174 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 PET100P0DJ07 73 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 CDKN2CP42773 168 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 OR1E2P47887 323 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 GABRA4P48169 554 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 CDC34P49427 236 aaPredicted RBP1.41□□□□□ -2.18
CCDC7-216ENST00000640058 SULT1A2P50226 295 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 RAP1GDS1P52306 607 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 RAB4BP61018 213 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 DAD1P61803 113 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 POLR2GP62487 172 aaKnown RBP eCLIP1.41□□□□□ -2.18
CCDC7-216ENST00000640058 ZNF117Q03924 483 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 PDK2Q15119 407 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 MRPL51Q4U2R6 128 aaKnown RBP1.41□□□□□ -2.18
CCDC7-216ENST00000640058 AKIRIN2Q53H80 203 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 MESTQ5EB52 335 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 SPATA31B1PQ5VZV4 182 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 FAM151BQ6UXP7 276 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 TBC1D19Q8N5T2 526 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 ACY3Q96HD9 319 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 ZNF514Q96K75 400 aaPredicted RBP1.41□□□□□ -2.18
CCDC7-216ENST00000640058 TBX5Q99593 518 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 CDCA4Q9BXL8 241 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 PARVBQ9HBI1 364 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 BATF3Q9NR55 127 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 PAQR5Q9NXK6 330 aaPredicted RBP1.41□□□□□ -2.18
CCDC7-216ENST00000640058 STOML2Q9UJZ1 356 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.41□□□□□ -2.18
CCDC7-216ENST00000640058 PUS1Q9Y606 427 aaKnown RBP eCLIP1.41□□□□□ -2.18
CCDC7-216ENST00000640058 ANKRD30AQ9BXX3 1397 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 VWDEQ8N2E2 1590 aa1.41□□□□□ -2.18
CCDC7-216ENST00000640058 PTPRJQ12913 1337 aa1.4□□□□□ -2.18
CCDC7-216ENST00000640058 NPATQ14207 1427 aa1.4□□□□□ -2.18
CCDC7-216ENST00000640058 DOCK10Q96BY6 2186 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 ADAMTS7Q9UKP4 1686 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 PEG3Q9GZU2 1588 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 FTCDNL1E5RQL4 147 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 LRRN3E7EW58 273 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 PGRMC1O00264 195 aaKnown RBP1.4□□□□□ -2.19
CCDC7-216ENST00000640058 ITGB1BP1O14713 200 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 COCHO43405 550 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 ARL6IP5O75915 188 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 HMGN1P05114 100 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 OR4A8P0C604 315 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 OCM2P0CE71 109 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 IDO1P14902 403 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 NQO1P15559 274 aaKnown RBP1.4□□□□□ -2.19
CCDC7-216ENST00000640058 GZMHP20718 246 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 CSRP1P21291 193 aaKnown RBP1.4□□□□□ -2.19
CCDC7-216ENST00000640058 S100A1P23297 94 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 CFL1P23528 166 aaKnown RBP1.4□□□□□ -2.19
CCDC7-216ENST00000640058 ALDH3A1P30838 453 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 HSPA9P38646 679 aaKnown RBP1.4□□□□□ -2.19
CCDC7-216ENST00000640058 TSPEAR-AS2P59090 65 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 AP3S2P59780 193 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 DEFA6Q01524 100 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 SPA17Q15506 151 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 MOGQ16653 247 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 TBC1D28Q2M2D7 210 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 SCGB1D4Q6XE38 83 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 SMIM15Q7Z3B0 74 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.4□□□□□ -2.19
CCDC7-216ENST00000640058 OR8J2Q8NGG1 315 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 PYDC1Q8WXC3 89 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 LZICQ8WZA0 190 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 PPCDCQ96CD2 204 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 ABHD14BQ96IU4 210 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 RBP7Q96R05 134 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 OR7D2Q96RA2 312 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 DERL2Q9GZP9 239 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 C6orf62Q9GZU0 229 aaPredicted RBP1.4□□□□□ -2.19
CCDC7-216ENST00000640058 GLS2Q9UI32 602 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 SNX10Q9Y5X0 201 aa1.4□□□□□ -2.19
CCDC7-216ENST00000640058 SCN9AQ15858 1988 aa1.39□□□□□ -2.19
CCDC7-216ENST00000640058 SMARCA2P51531 1590 aa1.39□□□□□ -2.19
CCDC7-216ENST00000640058 DHRS12A0PJE2 317 aa1.39□□□□□ -2.19
CCDC7-216ENST00000640058 VPS37CA5D8V6 355 aaPredicted RBP1.39□□□□□ -2.19
CCDC7-216ENST00000640058 C19orf71A6NCJ1 209 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms