RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 GPR141Q7Z602 305 aa12.32□□□□□ -0.44
LINC00339-209ENST00000635450 ANKRD13BQ86YJ7 626 aa12.32□□□□□ -0.44
LINC00339-209ENST00000635450 OR5AU1Q8NGC0 362 aa12.32□□□□□ -0.44
LINC00339-209ENST00000635450 KCTD12Q96CX2 325 aaKnown RBP12.32□□□□□ -0.44
LINC00339-209ENST00000635450 AGMATQ9BSE5 352 aa12.32□□□□□ -0.44
LINC00339-209ENST00000635450 LIN7CQ9NUP9 197 aaKnown RBP12.32□□□□□ -0.44
LINC00339-209ENST00000635450 OR5H14A6NHG9 310 aa12.31□□□□□ -0.44
LINC00339-209ENST00000635450 CTXN2P0C2S0 81 aa12.31□□□□□ -0.44
LINC00339-209ENST00000635450 MC5RP33032 325 aa12.31□□□□□ -0.44
LINC00339-209ENST00000635450 MMDQ15546 238 aa12.31□□□□□ -0.44
LINC00339-209ENST00000635450 GPR107Q5VW38 600 aa12.31□□□□□ -0.44
LINC00339-209ENST00000635450 SLC35E3Q7Z769 313 aa12.31□□□□□ -0.44
LINC00339-209ENST00000635450 FOXRED2Q8IWF2 684 aa12.31□□□□□ -0.44
LINC00339-209ENST00000635450 SAMD12Q8N8I0 201 aa12.31□□□□□ -0.44
LINC00339-209ENST00000635450 Q8N9W7 124 aa12.31□□□□□ -0.44
LINC00339-209ENST00000635450 ZNF251Q9BRH9 671 aa12.31□□□□□ -0.44
LINC00339-209ENST00000635450 ABCG5Q9H222 651 aa12.31□□□□□ -0.44
LINC00339-209ENST00000635450 IGKV1D-8A0A087WSZ0 117 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 H7C2Y5 167 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 GABARAPO95166 117 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 IGHG2P01859 326 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 OR8U9P0C7N5 309 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 CT45A6P0DMU7 189 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 CT45A5P0DMU8 189 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 CT45A7P0DMV0 189 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 F2RL1P55085 397 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 ACTBP60709 375 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 CNIH2Q6PI25 160 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 FAM131AQ6UXB0 335 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.3□□□□□ -0.44
LINC00339-209ENST00000635450 OR4X2Q8NGF9 303 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 OR8U1Q8NH10 309 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 OR2D2Q9H210 308 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 PLSCR3Q9NRY6 295 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 KIAA1456Q9P272 454 aa12.3□□□□□ -0.44
LINC00339-209ENST00000635450 XRCC3O43542 346 aa12.29□□□□□ -0.44
LINC00339-209ENST00000635450 SSX5O60225 188 aa12.29□□□□□ -0.44
LINC00339-209ENST00000635450 TFAP2AP05549 437 aa12.29□□□□□ -0.44
LINC00339-209ENST00000635450 ALDH3B2P48448 385 aa12.29□□□□□ -0.44
LINC00339-209ENST00000635450 RORCP51449 518 aa12.29□□□□□ -0.44
LINC00339-209ENST00000635450 GLDNQ6ZMI3 551 aaPredicted RBP12.29□□□□□ -0.44
LINC00339-209ENST00000635450 OR4F17Q8NGA8 305 aa12.29□□□□□ -0.44
LINC00339-209ENST00000635450 CHPT1Q8WUD6 406 aa12.29□□□□□ -0.44
LINC00339-209ENST00000635450 ACOT12Q8WYK0 555 aa12.29□□□□□ -0.44
LINC00339-209ENST00000635450 OR4F4Q96R69 305 aa12.29□□□□□ -0.44
LINC00339-209ENST00000635450 NAA50Q9GZZ1 169 aaKnown RBP12.29□□□□□ -0.44
LINC00339-209ENST00000635450 AUNIPQ9H7T9 357 aa12.29□□□□□ -0.44
LINC00339-209ENST00000635450 COMMD3Q9UBI1 195 aa12.29□□□□□ -0.44
LINC00339-209ENST00000635450 ANXA10Q9UJ72 324 aa12.29□□□□□ -0.44
LINC00339-209ENST00000635450 GAB2Q9UQC2 676 aa12.29□□□□□ -0.44
LINC00339-209ENST00000635450 WASHC3Q9Y3C0 194 aa12.29□□□□□ -0.44
LINC00339-209ENST00000635450 PSMB11A5LHX3 300 aa12.28□□□□□ -0.44
LINC00339-209ENST00000635450 M0R1X1 148 aa12.28□□□□□ -0.44
LINC00339-209ENST00000635450 AP4M1O00189 453 aa12.28□□□□□ -0.44
LINC00339-209ENST00000635450 NBR2O15453 112 aa12.28□□□□□ -0.44
LINC00339-209ENST00000635450 APOA2P02652 100 aa12.28□□□□□ -0.44
LINC00339-209ENST00000635450 IGLL1P15814 213 aa12.28□□□□□ -0.44
LINC00339-209ENST00000635450 SOX6P35712 828 aa12.28□□□□□ -0.44
LINC00339-209ENST00000635450 CBX5P45973 191 aa12.28□□□□□ -0.44
LINC00339-209ENST00000635450 ARPC4P59998 168 aa12.28□□□□□ -0.44
LINC00339-209ENST00000635450 SLC35B1P78383 322 aa12.28□□□□□ -0.44
LINC00339-209ENST00000635450 CTF1Q16619 201 aa12.28□□□□□ -0.44
LINC00339-209ENST00000635450 TMEM69Q5SWH9 247 aa12.28□□□□□ -0.44
LINC00339-209ENST00000635450 MZT2AQ6P582 158 aa12.28□□□□□ -0.44
LINC00339-209ENST00000635450 H1FOOQ8IZA3 346 aaPredicted RBP12.28□□□□□ -0.44
LINC00339-209ENST00000635450 FAM71E2Q8N5Q1 922 aa12.28□□□□□ -0.44
LINC00339-209ENST00000635450 CMTM3Q96MX0 182 aa12.28□□□□□ -0.44
LINC00339-209ENST00000635450 NOL4LQ96MY1 436 aaPredicted RBP12.28□□□□□ -0.44
LINC00339-209ENST00000635450 SMIM31A0A1B0GVY4 71 aa12.27□□□□□ -0.45
LINC00339-209ENST00000635450 TCRBV4S1A1TA0A5B7 111 aa12.27□□□□□ -0.45
LINC00339-209ENST00000635450 H0YJW9 148 aa12.27□□□□□ -0.45
LINC00339-209ENST00000635450 RBBP9O75884 186 aa12.27□□□□□ -0.45
LINC00339-209ENST00000635450 KHDC1LQ5JSQ8 128 aa12.27□□□□□ -0.45
LINC00339-209ENST00000635450 C18orf65Q6ZTR6 163 aa12.27□□□□□ -0.45
LINC00339-209ENST00000635450 DRAXINQ8NBI3 349 aaPredicted RBP12.27□□□□□ -0.45
LINC00339-209ENST00000635450 BEST4Q8NFU0 473 aa12.27□□□□□ -0.45
LINC00339-209ENST00000635450 OR5AN1Q8NGI8 311 aa12.27□□□□□ -0.45
LINC00339-209ENST00000635450 AP3S1Q92572 193 aa12.27□□□□□ -0.45
LINC00339-209ENST00000635450 GON7Q9BXV9 100 aa12.27□□□□□ -0.45
LINC00339-209ENST00000635450 IFT46Q9NQC8 304 aa12.27□□□□□ -0.45
LINC00339-209ENST00000635450 AURKAIP1Q9NWT8 199 aaPredicted RBP12.27□□□□□ -0.45
LINC00339-209ENST00000635450 SDHAF2Q9NX18 166 aa12.27□□□□□ -0.45
LINC00339-209ENST00000635450 PROP1O75360 226 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 APOA1P02647 267 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 CNTFRP26992 372 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 LUMP51884 338 aaPredicted RBP12.26□□□□□ -0.45
LINC00339-209ENST00000635450 CBX3Q13185 183 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 PLGLAQ15195 96 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 FOXB2Q5VYV0 432 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 ZNF329Q86UD4 541 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 HOGA1Q86XE5 327 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 PDPNQ86YL7 162 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 CLVS1Q8IUQ0 354 aaPredicted RBP12.26□□□□□ -0.45
LINC00339-209ENST00000635450 STPG2Q8N412 459 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 GVQW1Q8N7I0 195 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 ZNF383Q8NA42 475 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 NPBQ8NG41 125 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 RITA1Q96K30 269 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 RNF5Q99942 180 aa12.26□□□□□ -0.45
LINC00339-209ENST00000635450 ZNF107Q9UII5 783 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms