RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 RNF150Q9ULK6 438 aa13.75□□□□□ -0.21
IRF3-230ENST00000601809 TCRBV4S1A1TA0A5B7 111 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 TMEM235A6NFC5 223 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 NBR2O15453 112 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 AIREO43918 545 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 SCGNO76038 276 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 HLA-DRB1P01911 266 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 RPS19P39019 145 aaKnown RBP13.74□□□□□ -0.21
IRF3-230ENST00000601809 MRPS15P82914 257 aaKnown RBP13.74□□□□□ -0.21
IRF3-230ENST00000601809 ARFRP1Q13795 201 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 C5orf64Q2M2E5 130 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 IDNKQ5T6J7 187 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 KPRPQ5T749 579 aaPredicted RBP13.74□□□□□ -0.21
IRF3-230ENST00000601809 FOXRED2Q8IWF2 684 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 H1FOOQ8IZA3 346 aaPredicted RBP13.74□□□□□ -0.21
IRF3-230ENST00000601809 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.74□□□□□ -0.21
IRF3-230ENST00000601809 WFDC9Q8NEX5 89 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 OR4F17Q8NGA8 305 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 OR13F1Q8NGS4 319 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 NUDCD2Q8WVJ2 157 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 OR4F4Q96R69 305 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 DCSTAMPQ9H295 470 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 SPATA2Q9UM82 520 aa13.74□□□□□ -0.21
IRF3-230ENST00000601809 IGHV7-81A0A0B4J1V7 117 aa13.73□□□□□ -0.21
IRF3-230ENST00000601809 A0A1W2PRX2 142 aa13.73□□□□□ -0.21
IRF3-230ENST00000601809 BET1O15155 118 aa13.73□□□□□ -0.21
IRF3-230ENST00000601809 SOX6P35712 828 aa13.73□□□□□ -0.21
IRF3-230ENST00000601809 DEFA6Q01524 100 aa13.73□□□□□ -0.21
IRF3-230ENST00000601809 PNLIPRP3Q17RR3 467 aa13.73□□□□□ -0.21
IRF3-230ENST00000601809 ETV3LQ6ZN32 361 aa13.73□□□□□ -0.21
IRF3-230ENST00000601809 A0A0A6YYH2 397 aa13.72□□□□□ -0.21
IRF3-230ENST00000601809 A6NJ64 397 aa13.72□□□□□ -0.21
IRF3-230ENST00000601809 G3V4G9 280 aa13.72□□□□□ -0.21
IRF3-230ENST00000601809 PPIFP30405 207 aaKnown RBP13.72□□□□□ -0.21
IRF3-230ENST00000601809 MC5RP33032 325 aa13.72□□□□□ -0.21
IRF3-230ENST00000601809 RPL23AP62750 156 aaKnown RBP13.72□□□□□ -0.21
IRF3-230ENST00000601809 NDPQ00604 133 aa13.72□□□□□ -0.21
IRF3-230ENST00000601809 BEAN1Q3B7T3 259 aa13.72□□□□□ -0.21
IRF3-230ENST00000601809 C19orf54Q5BKX5 351 aa13.72□□□□□ -0.21
IRF3-230ENST00000601809 C18orf65Q6ZTR6 163 aa13.72□□□□□ -0.21
IRF3-230ENST00000601809 COMMD1Q8N668 190 aa13.72□□□□□ -0.21
IRF3-230ENST00000601809 DRAXINQ8NBI3 349 aaPredicted RBP13.72□□□□□ -0.21
IRF3-230ENST00000601809 OR10J5Q8NHC4 309 aa13.72□□□□□ -0.21
IRF3-230ENST00000601809 RNF5Q99942 180 aa13.72□□□□□ -0.21
IRF3-230ENST00000601809 FUNDC2Q9BWH2 189 aa13.72□□□□□ -0.21
IRF3-230ENST00000601809 VCX3AQ9NNX9 186 aa13.72□□□□□ -0.21
IRF3-230ENST00000601809 SDHAF2Q9NX18 166 aa13.72□□□□□ -0.21
IRF3-230ENST00000601809 WASHC3Q9Y3C0 194 aa13.72□□□□□ -0.21
IRF3-230ENST00000601809 RRHO14718 337 aa13.71□□□□□ -0.21
IRF3-230ENST00000601809 RBBP9O75884 186 aa13.71□□□□□ -0.21
IRF3-230ENST00000601809 IGHG4P01861 327 aa13.71□□□□□ -0.21
IRF3-230ENST00000601809 IGKV1-16P04430 117 aa13.71□□□□□ -0.21
IRF3-230ENST00000601809 OR8U9P0C7N5 309 aa13.71□□□□□ -0.21
IRF3-230ENST00000601809 TALDO1P37837 337 aa13.71□□□□□ -0.21
IRF3-230ENST00000601809 CRIP2P52943 208 aaPredicted RBP13.71□□□□□ -0.21
IRF3-230ENST00000601809 LSM3P62310 102 aaKnown RBP13.71□□□□□ -0.21
IRF3-230ENST00000601809 PITPNAQ00169 270 aa13.71□□□□□ -0.21
IRF3-230ENST00000601809 OR8U1Q8NH10 309 aa13.71□□□□□ -0.21
IRF3-230ENST00000601809 MYOZ3Q8TDC0 251 aa13.71□□□□□ -0.21
IRF3-230ENST00000601809 OR2D2Q9H210 308 aa13.71□□□□□ -0.21
IRF3-230ENST00000601809 ZNF221Q9UK13 617 aa13.71□□□□□ -0.21
IRF3-230ENST00000601809 NOTCH3Q9UM47 2321 aa13.71□□□□□ -0.21
IRF3-230ENST00000601809 TFAP2AP05549 437 aa13.7□□□□□ -0.22
IRF3-230ENST00000601809 C1QL4Q86Z23 238 aa13.7□□□□□ -0.22
IRF3-230ENST00000601809 CROCCP3Q8IVE0 287 aa13.7□□□□□ -0.22
IRF3-230ENST00000601809 DDB2Q92466 427 aa13.7□□□□□ -0.22
IRF3-230ENST00000601809 SLC25A46Q96AG3 418 aa13.7□□□□□ -0.22
IRF3-230ENST00000601809 OR51J1Q9H342 316 aa13.7□□□□□ -0.22
IRF3-230ENST00000601809 FBXL15Q9H469 300 aa13.7□□□□□ -0.22
IRF3-230ENST00000601809 AUNIPQ9H7T9 357 aa13.7□□□□□ -0.22
IRF3-230ENST00000601809 ZFP57Q9NU63 452 aa13.7□□□□□ -0.22
IRF3-230ENST00000601809 FBXO7Q9Y3I1 522 aa13.7□□□□□ -0.22
IRF3-230ENST00000601809 TRAV18A0A075B6X5 111 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 M0R1X1 148 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 FCN1O00602 326 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 ATP6V0E1O15342 81 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 TUSC2O75896 110 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 IGLV2-14P01704 120 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 EGR2P11161 476 aaPredicted RBP13.69□□□□□ -0.22
IRF3-230ENST00000601809 PSMB8P28062 276 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 NCS1P62166 190 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 SLC35B1P78383 322 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 FOXE3Q13461 319 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 LIN54Q6MZP7 749 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 TEX38Q6PEX7 206 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 CNIH2Q6PI25 160 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 PDPNQ86YL7 162 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 ST6GALNAC5Q9BVH7 336 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 ANXA10Q9UJ72 324 aa13.69□□□□□ -0.22
IRF3-230ENST00000601809 RRP9O43818 475 aaKnown RBP13.68□□□□□ -0.22
IRF3-230ENST00000601809 IGLV1-40P01703 118 aa13.68□□□□□ -0.22
IRF3-230ENST00000601809 IGLV2-23P01705 113 aa13.68□□□□□ -0.22
IRF3-230ENST00000601809 HLA-DQB1P01920 261 aa13.68□□□□□ -0.22
IRF3-230ENST00000601809 RPLP1P05386 114 aaKnown RBP13.68□□□□□ -0.22
IRF3-230ENST00000601809 ELANEP08246 267 aa13.68□□□□□ -0.22
IRF3-230ENST00000601809 PTHLHP12272 177 aa13.68□□□□□ -0.22
IRF3-230ENST00000601809 GNG2P59768 71 aa13.68□□□□□ -0.22
IRF3-230ENST00000601809 SSBP2P81877 361 aaPredicted RBP13.68□□□□□ -0.22
IRF3-230ENST00000601809 KIAA0141Q14154 515 aaPredicted RBP13.68□□□□□ -0.22
IRF3-230ENST00000601809 PSG5Q15238 335 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms