RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 CT45A5P0DMU8 189 aa12.53□□□□□ -0.4
PPFIA4-213ENST00000601609 CT45A7P0DMV0 189 aa12.53□□□□□ -0.4
PPFIA4-213ENST00000601609 HACD4Q5VWC8 232 aa12.53□□□□□ -0.4
PPFIA4-213ENST00000601609 OR8U1Q8NH10 309 aa12.53□□□□□ -0.4
PPFIA4-213ENST00000601609 YIPF6Q96EC8 236 aa12.53□□□□□ -0.4
PPFIA4-213ENST00000601609 SCOCQ9UIL1 159 aa12.53□□□□□ -0.4
PPFIA4-213ENST00000601609 PKD1L1Q8TDX9 2849 aa12.52□□□□□ -0.4
PPFIA4-213ENST00000601609 TRBV6-7A0A0A0MS04 114 aa12.52□□□□□ -0.41
PPFIA4-213ENST00000601609 H0YJW9 148 aa12.52□□□□□ -0.41
PPFIA4-213ENST00000601609 TFAP2AP05549 437 aa12.52□□□□□ -0.41
PPFIA4-213ENST00000601609 CD33P20138 364 aa12.52□□□□□ -0.41
PPFIA4-213ENST00000601609 DTYMKP23919 212 aa12.52□□□□□ -0.41
PPFIA4-213ENST00000601609 MC5RP33032 325 aa12.52□□□□□ -0.41
PPFIA4-213ENST00000601609 SCAND1P57086 179 aa12.52□□□□□ -0.41
PPFIA4-213ENST00000601609 PITPNAQ00169 270 aa12.52□□□□□ -0.41
PPFIA4-213ENST00000601609 CROCCP3Q8IVE0 287 aa12.52□□□□□ -0.41
PPFIA4-213ENST00000601609 COMMD1Q8N668 190 aa12.52□□□□□ -0.41
PPFIA4-213ENST00000601609 ABHD5Q8WTS1 349 aa12.52□□□□□ -0.41
PPFIA4-213ENST00000601609 RITA1Q96K30 269 aa12.52□□□□□ -0.41
PPFIA4-213ENST00000601609 AGMATQ9BSE5 352 aa12.52□□□□□ -0.41
PPFIA4-213ENST00000601609 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.52□□□□□ -0.41
PPFIA4-213ENST00000601609 PARP11Q9NR21 331 aa12.52□□□□□ -0.41
PPFIA4-213ENST00000601609 TRAV18A0A075B6X5 111 aa12.51□□□□□ -0.41
PPFIA4-213ENST00000601609 J3QRK9 145 aa12.51□□□□□ -0.41
PPFIA4-213ENST00000601609 RPL23AP62750 156 aaKnown RBP12.51□□□□□ -0.41
PPFIA4-213ENST00000601609 PNLIPRP3Q17RR3 467 aa12.51□□□□□ -0.41
PPFIA4-213ENST00000601609 C5orf64Q2M2E5 130 aa12.51□□□□□ -0.41
PPFIA4-213ENST00000601609 ZNF260Q3ZCT1 412 aa12.51□□□□□ -0.41
PPFIA4-213ENST00000601609 CXorf66Q5JRM2 361 aaPredicted RBP12.51□□□□□ -0.41
PPFIA4-213ENST00000601609 TEX38Q6PEX7 206 aa12.51□□□□□ -0.41
PPFIA4-213ENST00000601609 KLHL30-AS1Q8NEE0 82 aa12.51□□□□□ -0.41
PPFIA4-213ENST00000601609 SLC25A38Q96DW6 304 aa12.51□□□□□ -0.41
PPFIA4-213ENST00000601609 DIABLOQ9NR28 239 aa12.51□□□□□ -0.41
PPFIA4-213ENST00000601609 IGKV1D-8A0A087WSZ0 117 aa12.5□□□□□ -0.41
PPFIA4-213ENST00000601609 RBBP9O75884 186 aa12.5□□□□□ -0.41
PPFIA4-213ENST00000601609 DIRAS3O95661 229 aa12.5□□□□□ -0.41
PPFIA4-213ENST00000601609 OR5H8P0DN80 308 aa12.5□□□□□ -0.41
PPFIA4-213ENST00000601609 RPS16P62249 146 aaKnown RBP12.5□□□□□ -0.41
PPFIA4-213ENST00000601609 CBX3Q13185 183 aa12.5□□□□□ -0.41
PPFIA4-213ENST00000601609 SRSF7Q16629 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
PPFIA4-213ENST00000601609 LIN54Q6MZP7 749 aa12.5□□□□□ -0.41
PPFIA4-213ENST00000601609 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.5□□□□□ -0.41
PPFIA4-213ENST00000601609 DCSTAMPQ9H295 470 aa12.5□□□□□ -0.41
PPFIA4-213ENST00000601609 FBXL15Q9H469 300 aa12.5□□□□□ -0.41
PPFIA4-213ENST00000601609 BATF3Q9NR55 127 aa12.5□□□□□ -0.41
PPFIA4-213ENST00000601609 SLC35D1Q9NTN3 355 aa12.5□□□□□ -0.41
PPFIA4-213ENST00000601609 SPATA2Q9UM82 520 aa12.5□□□□□ -0.41
PPFIA4-213ENST00000601609 G3V4G9 280 aa12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 HLA-DRB1P01911 266 aa12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 CTXN2P0C2S0 81 aa12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 RPS19P39019 145 aaKnown RBP12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 ARPC4P59998 168 aa12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 ECSCRQ19T08 205 aa12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 Q6ZS49 121 aa12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 PDPNQ86YL7 162 aa12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 ZNF383Q8NA42 475 aa12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 NPBQ8NG41 125 aa12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 OR5AN1Q8NGI8 311 aa12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 CLCC1Q96S66 551 aa12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 TSNAXQ99598 290 aaKnown RBP12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 FUNDC2Q9BWH2 189 aa12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 OR51J1Q9H342 316 aa12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 SDHAF2Q9NX18 166 aa12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 WSB1Q9Y6I7 421 aa12.49□□□□□ -0.41
PPFIA4-213ENST00000601609 RRHO14718 337 aa12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 ATP6V0E1O15342 81 aa12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 TMEM127O75204 238 aa12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 NDUFA3O95167 84 aa12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 FCER2P06734 321 aa12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 LINC00205P59089 165 aa12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 NCS1P62166 190 aa12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 UBE2NLQ5JXB2 153 aa12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 LCNL1Q6ZST4 164 aa12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 C8orf86Q6ZUL3 223 aa12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 H1FOOQ8IZA3 346 aaPredicted RBP12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 FLYWCH2Q96CP2 140 aaKnown RBP12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 TOLLIPQ9H0E2 274 aa12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 ZFP57Q9NU63 452 aa12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 METTL1Q9UBP6 276 aaKnown RBP12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 A3GALT2U3KPV4 340 aa12.48□□□□□ -0.41
PPFIA4-213ENST00000601609 A0A0A6YYH2 397 aa12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 IGHV7-81A0A0B4J1V7 117 aa12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 A6NJ64 397 aa12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 WIPF1O43516 503 aa12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 SSX5O60225 188 aa12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 RPLP1P05386 114 aaKnown RBP12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 SMIM18P0DKX4 95 aa12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 NFYAP23511 347 aaPredicted RBP12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 THBS3P49746 956 aa12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 LUMP51884 338 aaPredicted RBP12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 VBP1P61758 197 aa12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 FOXE3Q13461 319 aa12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 RTL8BQ17RB0 113 aa12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 CNIH2Q6PI25 160 aa12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 SAMD12Q8N8I0 201 aa12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 S100A16Q96FQ6 103 aaKnown RBP12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 RNF5Q99942 180 aa12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 MRPS26Q9BYN8 205 aaKnown RBP12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 ANXA10Q9UJ72 324 aa12.47□□□□□ -0.41
PPFIA4-213ENST00000601609 VWFP04275 2813 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms