RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 DMBX1Q8NFW5 382 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 PPP1R35Q8TAP8 253 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 GINS3Q9BRX5 216 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 RAB1BQ9H0U4 201 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 ZNF665Q9H7R5 613 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 SMCO4Q9NRQ5 59 aa12.61□□□□□ -0.39
VRK3-218ENST00000600031 MEX3AA1L020 520 aaKnown RBP12.6□□□□□ -0.39
VRK3-218ENST00000600031 AGPAT2O15120 278 aa12.6□□□□□ -0.39
VRK3-218ENST00000600031 LY6HO94772 140 aa12.6□□□□□ -0.39
VRK3-218ENST00000600031 TSPAN15O95858 294 aa12.6□□□□□ -0.39
VRK3-218ENST00000600031 NFYBP25208 207 aa12.6□□□□□ -0.39
VRK3-218ENST00000600031 LYZL2Q7Z4W2 148 aa12.6□□□□□ -0.39
VRK3-218ENST00000600031 RXFP4Q8TDU9 374 aa12.6□□□□□ -0.39
VRK3-218ENST00000600031 MSI2Q96DH6 328 aaKnown RBP12.6□□□□□ -0.39
VRK3-218ENST00000600031 DCTN5Q9BTE1 182 aa12.6□□□□□ -0.39
VRK3-218ENST00000600031 RSRP1Q9BUV0 290 aa12.6□□□□□ -0.39
VRK3-218ENST00000600031 STRAPQ9Y3F4 350 aaKnown RBP12.6□□□□□ -0.39
VRK3-218ENST00000600031 TMED3Q9Y3Q3 217 aa12.6□□□□□ -0.39
VRK3-218ENST00000600031 ST8SIA3O43173 380 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 CRYBA1P05813 215 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 OR8U9P0C7N5 309 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 FOLR2P14207 255 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 AADACP22760 399 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 C15orf54Q8N8G6 183 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 OR13A1Q8NGR1 328 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 OR8U1Q8NH10 309 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 MRGPRDQ8TDS7 321 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 SPOCK3Q9BQ16 436 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 TNFRSF13BO14836 293 aaPredicted RBP12.59□□□□□ -0.39
VRK3-218ENST00000600031 TMPRSS2O15393 492 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 CTXN2P0C2S0 81 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 SPP1P10451 314 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 SNCAP37840 140 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 HERV-K104P61576 105 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 SRPXP78539 464 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 PHLDA2Q53GA4 152 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 FAM185AQ8N0U4 392 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 FGFRL1Q8N441 504 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 IL1F10Q8WWZ1 152 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 CABLES2Q9BTV7 478 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 CACFD1Q9UGQ2 172 aa12.59□□□□□ -0.39
VRK3-218ENST00000600031 C12orf77C9JDV5 145 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 C9JQL5 133 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 OR5D13Q8NGL4 314 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 KCNIP1Q9NZI2 227 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 OR1A1Q9P1Q5 309 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 UTP20O75691 2785 aaKnown RBP12.58□□□□□ -0.4
VRK3-218ENST00000600031 ODAMA1E959 279 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 COLCA2A8K830 154 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 CLDN1O95832 211 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 PPYP01298 95 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 CDKN1AP38936 164 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 AKR1D1P51857 326 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 EDDM3BP56851 147 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 MIDNQ504T8 468 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 LYPD2Q6UXB3 125 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 OR1L1Q8NH94 360 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 AKR1E2Q96JD6 320 aa12.58□□□□□ -0.4
VRK3-218ENST00000600031 USF3Q68DE3 2245 aa12.57□□□□□ -0.4
VRK3-218ENST00000600031 NKX6-3A6NJ46 265 aa12.57□□□□□ -0.4
VRK3-218ENST00000600031 ZNF98A6NK75 572 aa12.57□□□□□ -0.4
VRK3-218ENST00000600031 PHF1O43189 567 aaPredicted RBP12.57□□□□□ -0.4
VRK3-218ENST00000600031 FCN3O75636 299 aa12.57□□□□□ -0.4
VRK3-218ENST00000600031 TUSC2O75896 110 aa12.57□□□□□ -0.4
VRK3-218ENST00000600031 DIRAS3O95661 229 aa12.57□□□□□ -0.4
VRK3-218ENST00000600031 IFNA4P05014 189 aa12.57□□□□□ -0.4
VRK3-218ENST00000600031 CAMLGP49069 296 aa12.57□□□□□ -0.4
VRK3-218ENST00000600031 GNMTQ14749 295 aa12.57□□□□□ -0.4
VRK3-218ENST00000600031 OR4D5Q8NGN0 318 aa12.57□□□□□ -0.4
VRK3-218ENST00000600031 OR10J5Q8NHC4 309 aa12.57□□□□□ -0.4
VRK3-218ENST00000600031 NEU4Q8WWR8 484 aaPredicted RBP12.57□□□□□ -0.4
VRK3-218ENST00000600031 FAM234AQ9H0X4 552 aa12.57□□□□□ -0.4
VRK3-218ENST00000600031 WFDC1Q9HC57 220 aa12.57□□□□□ -0.4
VRK3-218ENST00000600031 LRRK2Q5S007 2527 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 A1L4Q6 167 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 GOSR1O95249 250 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 CDS2O95674 445 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 HBZP02008 142 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 SSTR5P35346 364 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 RPL35P42766 123 aaKnown RBP12.56□□□□□ -0.4
VRK3-218ENST00000600031 GUK1Q16774 197 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 OR52M1Q8NGK5 317 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 SECTM1Q8WVN6 248 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 BSCL2Q96G97 398 aaPredicted RBP12.56□□□□□ -0.4
VRK3-218ENST00000600031 LURAP1Q96LR2 239 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 C19orf12Q9NSK7 152 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 RCL1Q9Y2P8 373 aaKnown RBP12.56□□□□□ -0.4
VRK3-218ENST00000600031 AKAP6Q13023 2319 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 C3orf85A0A1B0GTC6 90 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 C15orf65H3BRN8 121 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 ADAM20O43506 726 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 PPT1P50897 306 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 RAB5BP61020 215 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 ZNF616Q08AN1 781 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 CR1LQ2VPA4 569 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 RNF212Q495C1 297 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 FAM53AQ6NSI3 398 aaPredicted RBP12.56□□□□□ -0.4
VRK3-218ENST00000600031 H1FOOQ8IZA3 346 aaPredicted RBP12.56□□□□□ -0.4
VRK3-218ENST00000600031 TUBA4BQ9H853 241 aa12.56□□□□□ -0.4
VRK3-218ENST00000600031 PLEKHF2Q9H8W4 249 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms