RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 RAB3BP20337 219 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 GADD45AP24522 165 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 SERPINB10P48595 397 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 RAB25P57735 213 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 PLA2G7Q13093 441 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 GLDNQ6ZMI3 551 aaPredicted RBP17.97■□□□□ 0.47
SSBP4-205ENST00000598159 OR4A4PQ8NGN8 299 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 OR5M8Q8NGP6 311 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 MYOZ3Q8TDC0 251 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 UBE2E2Q96LR5 201 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 PARP11Q9NR21 331 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 RNF150Q9ULK6 438 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 KCNK7Q9Y2U2 307 aa17.97■□□□□ 0.47
SSBP4-205ENST00000598159 WI2-2373I1.2A0A1W2PRP0 233 aa17.96■□□□□ 0.47
SSBP4-205ENST00000598159 SHISA3A0PJX4 238 aa17.96■□□□□ 0.47
SSBP4-205ENST00000598159 IGLV1-40P01703 118 aa17.96■□□□□ 0.47
SSBP4-205ENST00000598159 RAB6AP20340 208 aa17.96■□□□□ 0.47
SSBP4-205ENST00000598159 OR10A3P58181 314 aa17.96■□□□□ 0.47
SSBP4-205ENST00000598159 DEFB136Q30KP8 78 aa17.96■□□□□ 0.47
SSBP4-205ENST00000598159 OR10R2Q8NGX6 335 aa17.96■□□□□ 0.47
SSBP4-205ENST00000598159 YTHDF1Q9BYJ9 559 aaKnown RBP17.96■□□□□ 0.47
SSBP4-205ENST00000598159 TOLLIPQ9H0E2 274 aa17.96■□□□□ 0.47
SSBP4-205ENST00000598159 RDH8Q9NYR8 311 aa17.96■□□□□ 0.47
SSBP4-205ENST00000598159 DNAH3Q8TD57 4116 aa17.96■□□□□ 0.47
SSBP4-205ENST00000598159 IGKV1-6A0A0C4DH72 117 aa17.95■□□□□ 0.46
SSBP4-205ENST00000598159 METTL21EPA6NDL7 271 aa17.95■□□□□ 0.46
SSBP4-205ENST00000598159 PROP1O75360 226 aa17.95■□□□□ 0.46
SSBP4-205ENST00000598159 KIAA0141Q14154 515 aaPredicted RBP17.95■□□□□ 0.46
SSBP4-205ENST00000598159 PLGLAQ15195 96 aa17.95■□□□□ 0.46
SSBP4-205ENST00000598159 UBE2UQ5VVX9 321 aa17.95■□□□□ 0.46
SSBP4-205ENST00000598159 ZNF491Q8N8L2 437 aa17.95■□□□□ 0.46
SSBP4-205ENST00000598159 MINDY2Q8NBR6 621 aa17.95■□□□□ 0.46
SSBP4-205ENST00000598159 KLK15Q9H2R5 256 aa17.95■□□□□ 0.46
SSBP4-205ENST00000598159 FBXL15Q9H469 300 aa17.95■□□□□ 0.46
SSBP4-205ENST00000598159 Q9H521 79 aa17.95■□□□□ 0.46
SSBP4-205ENST00000598159 VSIG4Q9Y279 399 aa17.95■□□□□ 0.46
SSBP4-205ENST00000598159 RAB27BO00194 218 aa17.94■□□□□ 0.46
SSBP4-205ENST00000598159 RAB9AP51151 201 aa17.94■□□□□ 0.46
SSBP4-205ENST00000598159 CRIP2P52943 208 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-205ENST00000598159 CX3CL1P78423 397 aa17.94■□□□□ 0.46
SSBP4-205ENST00000598159 TMEM267Q0VDI3 215 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-205ENST00000598159 MOGAT2Q3SYC2 334 aa17.94■□□□□ 0.46
SSBP4-205ENST00000598159 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-205ENST00000598159 OR11H1Q8NG94 326 aa17.94■□□□□ 0.46
SSBP4-205ENST00000598159 CENPOQ9BU64 300 aa17.94■□□□□ 0.46
SSBP4-205ENST00000598159 GAB2Q9UQC2 676 aa17.94■□□□□ 0.46
SSBP4-205ENST00000598159 FABP7O15540 132 aa17.93■□□□□ 0.46
SSBP4-205ENST00000598159 RAMP3O60896 148 aa17.93■□□□□ 0.46
SSBP4-205ENST00000598159 DIRAS3O95661 229 aa17.93■□□□□ 0.46
SSBP4-205ENST00000598159 RUNX1Q01196 453 aa17.93■□□□□ 0.46
SSBP4-205ENST00000598159 C22orf42Q6IC83 251 aa17.93■□□□□ 0.46
SSBP4-205ENST00000598159 SPARTQ8N0X7 666 aa17.93■□□□□ 0.46
SSBP4-205ENST00000598159 TCTEX1D1Q8N7M0 179 aa17.93■□□□□ 0.46
SSBP4-205ENST00000598159 DRAXINQ8NBI3 349 aaPredicted RBP17.93■□□□□ 0.46
SSBP4-205ENST00000598159 FCGR1BQ92637 280 aa17.93■□□□□ 0.46
SSBP4-205ENST00000598159 NUBP2Q9Y5Y2 271 aa17.93■□□□□ 0.46
SSBP4-205ENST00000598159 I3L521 148 aa17.92■□□□□ 0.46
SSBP4-205ENST00000598159 FCN1O00602 326 aa17.92■□□□□ 0.46
SSBP4-205ENST00000598159 TFAP2AP05549 437 aa17.92■□□□□ 0.46
SSBP4-205ENST00000598159 FCGR3AP08637 254 aa17.92■□□□□ 0.46
SSBP4-205ENST00000598159 GNB3P16520 340 aa17.92■□□□□ 0.46
SSBP4-205ENST00000598159 FGF9P31371 208 aaPredicted RBP17.92■□□□□ 0.46
SSBP4-205ENST00000598159 RPS16P62249 146 aaKnown RBP17.92■□□□□ 0.46
SSBP4-205ENST00000598159 DGCR2P98153 550 aa17.92■□□□□ 0.46
SSBP4-205ENST00000598159 FHL3Q13643 280 aa17.92■□□□□ 0.46
SSBP4-205ENST00000598159 ARL6IP1Q15041 203 aa17.92■□□□□ 0.46
SSBP4-205ENST00000598159 SRSF7Q16629 238 aaKnown RBP eCLIP17.92■□□□□ 0.46
SSBP4-205ENST00000598159 C9orf66Q5T8R8 295 aa17.92■□□□□ 0.46
SSBP4-205ENST00000598159 ZNF562Q6V9R5 426 aa17.92■□□□□ 0.46
SSBP4-205ENST00000598159 ZNF383Q8NA42 475 aa17.92■□□□□ 0.46
SSBP4-205ENST00000598159 OR10J5Q8NHC4 309 aa17.92■□□□□ 0.46
SSBP4-205ENST00000598159 TSNAXQ99598 290 aaKnown RBP17.92■□□□□ 0.46
SSBP4-205ENST00000598159 TRBV6-7A0A0A0MS04 114 aa17.91■□□□□ 0.46
SSBP4-205ENST00000598159 MFNGO00587 321 aa17.91■□□□□ 0.46
SSBP4-205ENST00000598159 GSTT2P0CG29 244 aa17.91■□□□□ 0.46
SSBP4-205ENST00000598159 GSTT2BP0CG30 244 aa17.91■□□□□ 0.46
SSBP4-205ENST00000598159 HIST1H1DP16402 221 aaKnown RBP17.91■□□□□ 0.46
SSBP4-205ENST00000598159 DCTN2Q13561 401 aaKnown RBP17.91■□□□□ 0.46
SSBP4-205ENST00000598159 PSG5Q15238 335 aa17.91■□□□□ 0.46
SSBP4-205ENST00000598159 C19orf54Q5BKX5 351 aa17.91■□□□□ 0.46
SSBP4-205ENST00000598159 PDPNQ86YL7 162 aa17.91■□□□□ 0.46
SSBP4-205ENST00000598159 OR1N2Q8NGR9 330 aa17.91■□□□□ 0.46
SSBP4-205ENST00000598159 CABLES2Q9BTV7 478 aa17.91■□□□□ 0.46
SSBP4-205ENST00000598159 METTL1Q9UBP6 276 aaKnown RBP17.91■□□□□ 0.46
SSBP4-205ENST00000598159 A0A1W2PN81 502 aa17.9■□□□□ 0.46
SSBP4-205ENST00000598159 BET1O15155 118 aa17.9■□□□□ 0.46
SSBP4-205ENST00000598159 SPDEFO95238 335 aa17.9■□□□□ 0.46
SSBP4-205ENST00000598159 APOA2P02652 100 aa17.9■□□□□ 0.46
SSBP4-205ENST00000598159 PSMB9P28065 219 aa17.9■□□□□ 0.46
SSBP4-205ENST00000598159 CHRNA7P36544 502 aa17.9■□□□□ 0.46
SSBP4-205ENST00000598159 TALDO1P37837 337 aa17.9■□□□□ 0.46
SSBP4-205ENST00000598159 ECSCRQ19T08 205 aa17.9■□□□□ 0.46
SSBP4-205ENST00000598159 AKIRIN2Q53H80 203 aa17.9■□□□□ 0.46
SSBP4-205ENST00000598159 IGSF11Q5DX21 431 aa17.9■□□□□ 0.46
SSBP4-205ENST00000598159 TPRA1Q86W33 373 aa17.9■□□□□ 0.46
SSBP4-205ENST00000598159 FLYWCH2Q96CP2 140 aaKnown RBP17.9■□□□□ 0.46
SSBP4-205ENST00000598159 ATG5Q9H1Y0 275 aa17.9■□□□□ 0.46
SSBP4-205ENST00000598159 GNB4Q9HAV0 340 aa17.9■□□□□ 0.46
SSBP4-205ENST00000598159 TXNL4BQ9NX01 149 aaKnown RBP17.9■□□□□ 0.46
SSBP4-205ENST00000598159 FOXA2Q9Y261 457 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms