RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.63■□□□□ 0.25
PNKP-209ENST00000596726 NPBQ8NG41 125 aa16.63■□□□□ 0.25
PNKP-209ENST00000596726 LINC00527Q9UJ94 153 aa16.63■□□□□ 0.25
PNKP-209ENST00000596726 MEGF8Q7Z7M0 2845 aa16.63■□□□□ 0.25
PNKP-209ENST00000596726 PLXNB1O43157 2135 aa16.63■□□□□ 0.25
PNKP-209ENST00000596726 AP4M1O00189 453 aa16.62■□□□□ 0.25
PNKP-209ENST00000596726 KCNAB3O43448 404 aa16.62■□□□□ 0.25
PNKP-209ENST00000596726 NDUFA3O95167 84 aa16.62■□□□□ 0.25
PNKP-209ENST00000596726 OPN1MWP04001 364 aa16.62■□□□□ 0.25
PNKP-209ENST00000596726 OPN1MW2P0DN77 364 aa16.62■□□□□ 0.25
PNKP-209ENST00000596726 OPN1MW3P0DN78 364 aa16.62■□□□□ 0.25
PNKP-209ENST00000596726 GNG2P59768 71 aa16.62■□□□□ 0.25
PNKP-209ENST00000596726 ZNF329Q86UD4 541 aa16.62■□□□□ 0.25
PNKP-209ENST00000596726 H1FOOQ8IZA3 346 aaPredicted RBP16.62■□□□□ 0.25
PNKP-209ENST00000596726 HSPB9Q9BQS6 159 aa16.62■□□□□ 0.25
PNKP-209ENST00000596726 ST6GALNAC5Q9BVH7 336 aa16.62■□□□□ 0.25
PNKP-209ENST00000596726 TSSC4Q9Y5U2 329 aaPredicted RBP16.62■□□□□ 0.25
PNKP-209ENST00000596726 TRAV18A0A075B6X5 111 aa16.61■□□□□ 0.25
PNKP-209ENST00000596726 TCRBV4S1A1TA0A5B7 111 aa16.61■□□□□ 0.25
PNKP-209ENST00000596726 NBR2O15453 112 aa16.61■□□□□ 0.25
PNKP-209ENST00000596726 OR8U9P0C7N5 309 aa16.61■□□□□ 0.25
PNKP-209ENST00000596726 SOX6P35712 828 aa16.61■□□□□ 0.25
PNKP-209ENST00000596726 NCS1P62166 190 aa16.61■□□□□ 0.25
PNKP-209ENST00000596726 ZNF383Q8NA42 475 aa16.61■□□□□ 0.25
PNKP-209ENST00000596726 OR8U1Q8NH10 309 aa16.61■□□□□ 0.25
PNKP-209ENST00000596726 SLC25A46Q96AG3 418 aa16.61■□□□□ 0.25
PNKP-209ENST00000596726 DIABLOQ9NR28 239 aa16.61■□□□□ 0.25
PNKP-209ENST00000596726 WASHC3Q9Y3C0 194 aa16.61■□□□□ 0.25
PNKP-209ENST00000596726 TFAP2AP05549 437 aa16.6■□□□□ 0.25
PNKP-209ENST00000596726 CTXN2P0C2S0 81 aa16.6■□□□□ 0.25
PNKP-209ENST00000596726 LINC00205P59089 165 aa16.6■□□□□ 0.25
PNKP-209ENST00000596726 C5orf64Q2M2E5 130 aa16.6■□□□□ 0.25
PNKP-209ENST00000596726 DRAXINQ8NBI3 349 aaPredicted RBP16.6■□□□□ 0.25
PNKP-209ENST00000596726 OR4F17Q8NGA8 305 aa16.6■□□□□ 0.25
PNKP-209ENST00000596726 OR4F4Q96R69 305 aa16.6■□□□□ 0.25
PNKP-209ENST00000596726 RNF5Q99942 180 aa16.6■□□□□ 0.25
PNKP-209ENST00000596726 GINS4Q9BRT9 223 aa16.6■□□□□ 0.25
PNKP-209ENST00000596726 OR2D2Q9H210 308 aa16.6■□□□□ 0.25
PNKP-209ENST00000596726 AUNIPQ9H7T9 357 aa16.6■□□□□ 0.25
PNKP-209ENST00000596726 SDHAF2Q9NX18 166 aa16.6■□□□□ 0.25
PNKP-209ENST00000596726 ZNF580Q9UK33 172 aa16.6■□□□□ 0.25
PNKP-209ENST00000596726 RBBP9O75884 186 aa16.59■□□□□ 0.25
PNKP-209ENST00000596726 HLA-DRB1P01911 266 aa16.59■□□□□ 0.25
PNKP-209ENST00000596726 IGF1P05019 195 aa16.59■□□□□ 0.25
PNKP-209ENST00000596726 VBP1P61758 197 aa16.59■□□□□ 0.25
PNKP-209ENST00000596726 CNIH2Q6PI25 160 aa16.59■□□□□ 0.25
PNKP-209ENST00000596726 ANKRD13BQ86YJ7 626 aa16.59■□□□□ 0.25
PNKP-209ENST00000596726 COMMD1Q8N668 190 aa16.59■□□□□ 0.25
PNKP-209ENST00000596726 R3HDM4Q96D70 268 aa16.59■□□□□ 0.25
PNKP-209ENST00000596726 C5orf30Q96GV9 206 aa16.59■□□□□ 0.25
PNKP-209ENST00000596726 MRPS26Q9BYN8 205 aaKnown RBP16.59■□□□□ 0.25
PNKP-209ENST00000596726 ZNF107Q9UII5 783 aaPredicted RBP16.59■□□□□ 0.25
PNKP-209ENST00000596726 NOTCH1P46531 2555 aa16.58■□□□□ 0.25
PNKP-209ENST00000596726 A0A1W2PRX2 142 aa16.58■□□□□ 0.24
PNKP-209ENST00000596726 H7C2Y5 167 aa16.58■□□□□ 0.24
PNKP-209ENST00000596726 M0R1X1 148 aa16.58■□□□□ 0.24
PNKP-209ENST00000596726 XRCC3O43542 346 aa16.58■□□□□ 0.24
PNKP-209ENST00000596726 SLC35B1P78383 322 aa16.58■□□□□ 0.24
PNKP-209ENST00000596726 UBE2NLQ5JXB2 153 aa16.58■□□□□ 0.24
PNKP-209ENST00000596726 KCTD12Q96CX2 325 aaKnown RBP16.58■□□□□ 0.24
PNKP-209ENST00000596726 ANXA10Q9UJ72 324 aa16.58■□□□□ 0.24
PNKP-209ENST00000596726 GABARAPO95166 117 aa16.57■□□□□ 0.24
PNKP-209ENST00000596726 ALDH3B2P48448 385 aa16.57■□□□□ 0.24
PNKP-209ENST00000596726 CFHR3Q02985 330 aa16.57■□□□□ 0.24
PNKP-209ENST00000596726 CTF1Q16619 201 aa16.57■□□□□ 0.24
PNKP-209ENST00000596726 S100A16Q96FQ6 103 aaKnown RBP16.57■□□□□ 0.24
PNKP-209ENST00000596726 GON7Q9BXV9 100 aa16.57■□□□□ 0.24
PNKP-209ENST00000596726 NAA50Q9GZZ1 169 aaKnown RBP16.57■□□□□ 0.24
PNKP-209ENST00000596726 KIAA1456Q9P272 454 aa16.57■□□□□ 0.24
PNKP-209ENST00000596726 IGHV7-81A0A0B4J1V7 117 aa16.56■□□□□ 0.24
PNKP-209ENST00000596726 RRHO14718 337 aa16.56■□□□□ 0.24
PNKP-209ENST00000596726 IGKV1-16P04430 117 aa16.56■□□□□ 0.24
PNKP-209ENST00000596726 LIN54Q6MZP7 749 aa16.56■□□□□ 0.24
PNKP-209ENST00000596726 HOGA1Q86XE5 327 aa16.56■□□□□ 0.24
PNKP-209ENST00000596726 PDPNQ86YL7 162 aa16.56■□□□□ 0.24
PNKP-209ENST00000596726 GVQW1Q8N7I0 195 aa16.56■□□□□ 0.24
PNKP-209ENST00000596726 SAMD12Q8N8I0 201 aa16.56■□□□□ 0.24
PNKP-209ENST00000596726 OR51J1Q9H342 316 aa16.56■□□□□ 0.24
PNKP-209ENST00000596726 RBM7Q9Y580 266 aaKnown RBP16.56■□□□□ 0.24
PNKP-209ENST00000596726 HLA-DQB1P01920 261 aa16.55■□□□□ 0.24
PNKP-209ENST00000596726 APOA2P02652 100 aa16.55■□□□□ 0.24
PNKP-209ENST00000596726 PTHLHP12272 177 aa16.55■□□□□ 0.24
PNKP-209ENST00000596726 NFYAP23511 347 aaPredicted RBP16.55■□□□□ 0.24
PNKP-209ENST00000596726 RPL23AP62750 156 aaKnown RBP16.55■□□□□ 0.24
PNKP-209ENST00000596726 TEX38Q6PEX7 206 aa16.55■□□□□ 0.24
PNKP-209ENST00000596726 RNF152Q8N8N0 203 aa16.55■□□□□ 0.24
PNKP-209ENST00000596726 BEST4Q8NFU0 473 aa16.55■□□□□ 0.24
PNKP-209ENST00000596726 FBXL15Q9H469 300 aa16.55■□□□□ 0.24
PNKP-209ENST00000596726 SLC35D1Q9NTN3 355 aa16.55■□□□□ 0.24
PNKP-209ENST00000596726 ZFP57Q9NU63 452 aa16.55■□□□□ 0.24
PNKP-209ENST00000596726 OR2W1Q9Y3N9 320 aa16.55■□□□□ 0.24
PNKP-209ENST00000596726 PSG5Q15238 335 aa16.54■□□□□ 0.24
PNKP-209ENST00000596726 KHDC1LQ5JSQ8 128 aa16.54■□□□□ 0.24
PNKP-209ENST00000596726 CMTM3Q96MX0 182 aa16.54■□□□□ 0.24
PNKP-209ENST00000596726 FCN1O00602 326 aa16.53■□□□□ 0.24
PNKP-209ENST00000596726 TUSC2O75896 110 aa16.53■□□□□ 0.24
PNKP-209ENST00000596726 SPDEFO95238 335 aa16.53■□□□□ 0.24
PNKP-209ENST00000596726 IGHG4P01861 327 aa16.53■□□□□ 0.24
PNKP-209ENST00000596726 VDAC1P21796 283 aa16.53■□□□□ 0.24
PNKP-209ENST00000596726 CBX5P45973 191 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms