RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 PNLIPRP3Q17RR3 467 aa8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 H1FOOQ8IZA3 346 aaPredicted RBP8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 STPG2Q8N412 459 aa8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 ZNF383Q8NA42 475 aa8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 NPBQ8NG41 125 aa8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 OR10J5Q8NHC4 309 aa8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 CHPT1Q8WUD6 406 aa8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 RASL11BQ9BPW5 248 aa8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 NAA50Q9GZZ1 169 aaKnown RBP8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 OR2D2Q9H210 308 aa8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 GHITMQ9H3K2 345 aa8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 ZNF107Q9UII5 783 aaPredicted RBP8.65□□□□□ -1.02
SHKBP1-206ENST00000595523 TRAV18A0A075B6X5 111 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 NBR2O15453 112 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 TMEM127O75204 238 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 OPN1MWP04001 364 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 IGKV1-16P04430 117 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 OR8U9P0C7N5 309 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 OPN1MW2P0DN77 364 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 OPN1MW3P0DN78 364 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 PTHLHP12272 177 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 SOX6P35712 828 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 PITPNAQ00169 270 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 CFHR3Q02985 330 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 CTF1Q16619 201 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 C5orf64Q2M2E5 130 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 CROCCP3Q8IVE0 287 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 OR4X2Q8NGF9 303 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 OR8U1Q8NH10 309 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 SLC25A46Q96AG3 418 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 PHF21AQ96BD5 680 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 R3HDM4Q96D70 268 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 ST6GALNAC5Q9BVH7 336 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 DCSTAMPQ9H295 470 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 AUNIPQ9H7T9 357 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 SDHAF2Q9NX18 166 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 ZNF221Q9UK13 617 aa8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 TSSC4Q9Y5U2 329 aaPredicted RBP8.64□□□□□ -1.03
SHKBP1-206ENST00000595523 A0A0A6YYH2 397 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 IGHV7-81A0A0B4J1V7 117 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 TCRBV4S1A1TA0A5B7 111 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 A6NJ64 397 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 M0R1X1 148 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 AP4M1O00189 453 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 KCNAB3O43448 404 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 GABARAPO95166 117 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 HLA-DRB1P01911 266 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 TFAP2AP05549 437 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 MC5RP33032 325 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 GNG2P59768 71 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 NDPQ00604 133 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 C18orf65Q6ZTR6 163 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 FOXRED2Q8IWF2 684 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 GVQW1Q8N7I0 195 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 GINS4Q9BRT9 223 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 ANXA10Q9UJ72 324 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 GAB2Q9UQC2 676 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 WASHC3Q9Y3C0 194 aa8.63□□□□□ -1.03
SHKBP1-206ENST00000595523 IGKV1D-13A0A0B4J2D9 117 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 H7C2Y5 167 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 RRHO14718 337 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 ATP6V0E1O15342 81 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 IGF1P05019 195 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 IGKV1-13P0DP09 117 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 NFYAP23511 347 aaPredicted RBP8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 ALDH3B2P48448 385 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 UBE2NLQ5JXB2 153 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 LCNL1Q6ZST4 164 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 ANKRD13BQ86YJ7 626 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 SAMD12Q8N8I0 201 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 OR4F17Q8NGA8 305 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 OR4F4Q96R69 305 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 MRPS26Q9BYN8 205 aaKnown RBP8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 FBXL15Q9H469 300 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 ZNF580Q9UK33 172 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 FBXO7Q9Y3I1 522 aa8.62□□□□□ -1.03
SHKBP1-206ENST00000595523 LINC00473A8K010 186 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 G3V4G9 280 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 FCN1O00602 326 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 XRCC3O43542 346 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 RBBP9O75884 186 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 TUSC2O75896 110 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 IGLV2-14P01704 120 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 IGLV2-23P01705 113 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 HLA-DQB1P01920 261 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 EIF4EP06730 217 aaKnown RBP8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 RPL23AP62750 156 aaKnown RBP8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 SLC35B1P78383 322 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 PSG5Q15238 335 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 C19orf54Q5BKX5 351 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 KHDC1LQ5JSQ8 128 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 GPR107Q5VW38 600 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 LIN54Q6MZP7 749 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 CNIH2Q6PI25 160 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 ETV3LQ6ZN32 361 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 HOGA1Q86XE5 327 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 PDPNQ86YL7 162 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 C1QL4Q86Z23 238 aa8.61□□□□□ -1.03
SHKBP1-206ENST00000595523 RNF152Q8N8N0 203 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms