RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 CT45A7P0DMV0 189 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 CNTFRP26992 372 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 PITPNAQ00169 270 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 CD83Q01151 205 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 PNLIPRP3Q17RR3 467 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 FOXRED2Q8IWF2 684 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 SAMD12Q8N8I0 201 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 OR8U1Q8NH10 309 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 SLC25A46Q96AG3 418 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 NAA50Q9GZZ1 169 aaKnown RBP11.01□□□□□ -0.65
CLIP3-205ENST00000592017 ABCG5Q9H222 651 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 DIABLOQ9NR28 239 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 PLSCR3Q9NRY6 295 aa11.01□□□□□ -0.65
CLIP3-205ENST00000592017 OR5H14A6NHG9 310 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 H0YJW9 148 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 J3QRK9 145 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 TMEM127O75204 238 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 IGHG2P01859 326 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 FCER2P06734 321 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 PTHLHP12272 177 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 SRSF7Q16629 238 aaKnown RBP eCLIP11□□□□□ -0.65
CLIP3-205ENST00000592017 BEAN1Q3B7T3 259 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 UBE2NLQ5JXB2 153 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 SAMD5Q5TGI4 173 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 GPR107Q5VW38 600 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 Q6ZS49 121 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 ZNF329Q86UD4 541 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 FAM71E2Q8N5Q1 922 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 R3HDM4Q96D70 268 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 RITA1Q96K30 269 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 HSPB9Q9BQS6 159 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 DCSTAMPQ9H295 470 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 GHITMQ9H3K2 345 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 KIAA1456Q9P272 454 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 WASHC3Q9Y3C0 194 aa11□□□□□ -0.65
CLIP3-205ENST00000592017 TET2Q6N021 2002 aaPredicted RBP11□□□□□ -0.65
CLIP3-205ENST00000592017 DNAH3Q8TD57 4116 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 A0A0A6YYH2 397 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 TCRBV4S1A1TA0A5B7 111 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 A6NJ64 397 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 LINC01548A6NM66 108 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 NBR2O15453 112 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 GABARAPO95166 117 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 DIRAS3O95661 229 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 TFAP2AP05549 437 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 SOX6P35712 828 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 LINC00205P59089 165 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 ARPC4P59998 168 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 TMEM69Q5SWH9 247 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 KPRPQ5T749 579 aaPredicted RBP10.99□□□□□ -0.65
CLIP3-205ENST00000592017 GPR141Q7Z602 305 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 H1FOOQ8IZA3 346 aaPredicted RBP10.99□□□□□ -0.65
CLIP3-205ENST00000592017 STPG2Q8N412 459 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 CHPT1Q8WUD6 406 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 TOLLIPQ9H0E2 274 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 SDHAF2Q9NX18 166 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 COMMD3Q9UBI1 195 aa10.99□□□□□ -0.65
CLIP3-205ENST00000592017 ZNF107Q9UII5 783 aaPredicted RBP10.99□□□□□ -0.65
CLIP3-205ENST00000592017 MEIS3P1A6NDR6 274 aa10.98□□□□□ -0.65
CLIP3-205ENST00000592017 AP4M1O00189 453 aa10.98□□□□□ -0.65
CLIP3-205ENST00000592017 APOA2P02652 100 aa10.98□□□□□ -0.65
CLIP3-205ENST00000592017 NFYAP23511 347 aaPredicted RBP10.98□□□□□ -0.65
CLIP3-205ENST00000592017 MC5RP33032 325 aa10.98□□□□□ -0.65
CLIP3-205ENST00000592017 SLC35B1P78383 322 aa10.98□□□□□ -0.65
CLIP3-205ENST00000592017 PLGLAQ15195 96 aa10.98□□□□□ -0.65
CLIP3-205ENST00000592017 ANKRD13BQ86YJ7 626 aa10.98□□□□□ -0.65
CLIP3-205ENST00000592017 GVQW1Q8N7I0 195 aa10.98□□□□□ -0.65
CLIP3-205ENST00000592017 ZNF383Q8NA42 475 aa10.98□□□□□ -0.65
CLIP3-205ENST00000592017 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.98□□□□□ -0.65
CLIP3-205ENST00000592017 KCTD12Q96CX2 325 aaKnown RBP10.98□□□□□ -0.65
CLIP3-205ENST00000592017 S100A16Q96FQ6 103 aaKnown RBP10.98□□□□□ -0.65
CLIP3-205ENST00000592017 AUNIPQ9H7T9 357 aa10.98□□□□□ -0.65
CLIP3-205ENST00000592017 ANXA10Q9UJ72 324 aa10.98□□□□□ -0.65
CLIP3-205ENST00000592017 XRCC3O43542 346 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 PROP1O75360 226 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 CTXN2P0C2S0 81 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 ALDH3B2P48448 385 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 TAS2R20P59543 309 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 CTF1Q16619 201 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 C5orf64Q2M2E5 130 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 OXLD1Q5BKU9 147 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 CNIH2Q6PI25 160 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 BEST4Q8NFU0 473 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 OR4F17Q8NGA8 305 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 OR5AN1Q8NGI8 311 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 C5orf30Q96GV9 206 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 OR4F4Q96R69 305 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 FBXL15Q9H469 300 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 IFT46Q9NQC8 304 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 PARP11Q9NR21 331 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 SLC35D1Q9NTN3 355 aa10.97□□□□□ -0.65
CLIP3-205ENST00000592017 TSSC4Q9Y5U2 329 aaPredicted RBP10.97□□□□□ -0.65
CLIP3-205ENST00000592017 NDUFA3O95167 84 aa10.96□□□□□ -0.65
CLIP3-205ENST00000592017 PRB2P02812 416 aaPredicted RBP10.96□□□□□ -0.65
CLIP3-205ENST00000592017 IGKV1-16P04430 117 aa10.96□□□□□ -0.65
CLIP3-205ENST00000592017 EIF4EP06730 217 aaKnown RBP10.96□□□□□ -0.65
CLIP3-205ENST00000592017 PF4V1P10720 104 aa10.96□□□□□ -0.65
CLIP3-205ENST00000592017 VDAC1P21796 283 aa10.96□□□□□ -0.65
CLIP3-205ENST00000592017 RORCP51449 518 aa10.96□□□□□ -0.65
CLIP3-205ENST00000592017 LUMP51884 338 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms