RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 CD83Q01151 205 aa18.92■□□□□ 0.62
LIMD2-207ENST00000579329 NSUN5P1Q3KNT7 163 aa18.92■□□□□ 0.62
LIMD2-207ENST00000579329 GLDNQ6ZMI3 551 aaPredicted RBP18.92■□□□□ 0.62
LIMD2-207ENST00000579329 KCTD12Q96CX2 325 aaKnown RBP18.92■□□□□ 0.62
LIMD2-207ENST00000579329 WASHC3Q9Y3C0 194 aa18.92■□□□□ 0.62
LIMD2-207ENST00000579329 VWFP04275 2813 aa18.91■□□□□ 0.62
LIMD2-207ENST00000579329 OPN1MWP04001 364 aa18.91■□□□□ 0.62
LIMD2-207ENST00000579329 CTXN2P0C2S0 81 aa18.91■□□□□ 0.62
LIMD2-207ENST00000579329 OR8U9P0C7N5 309 aa18.91■□□□□ 0.62
LIMD2-207ENST00000579329 OPN1MW2P0DN77 364 aa18.91■□□□□ 0.62
LIMD2-207ENST00000579329 OPN1MW3P0DN78 364 aa18.91■□□□□ 0.62
LIMD2-207ENST00000579329 UBE2NLQ5JXB2 153 aa18.91■□□□□ 0.62
LIMD2-207ENST00000579329 ANKRD13BQ86YJ7 626 aa18.91■□□□□ 0.62
LIMD2-207ENST00000579329 H1FOOQ8IZA3 346 aaPredicted RBP18.91■□□□□ 0.62
LIMD2-207ENST00000579329 OR5AN1Q8NGI8 311 aa18.91■□□□□ 0.62
LIMD2-207ENST00000579329 OR8U1Q8NH10 309 aa18.91■□□□□ 0.62
LIMD2-207ENST00000579329 FAM110DQ8TAY7 271 aaPredicted RBP18.91■□□□□ 0.62
LIMD2-207ENST00000579329 NOL4LQ96MY1 436 aaPredicted RBP18.91■□□□□ 0.62
LIMD2-207ENST00000579329 OR2D2Q9H210 308 aa18.91■□□□□ 0.62
LIMD2-207ENST00000579329 RBM7Q9Y580 266 aaKnown RBP18.91■□□□□ 0.62
LIMD2-207ENST00000579329 AP4M1O00189 453 aa18.9■□□□□ 0.62
LIMD2-207ENST00000579329 NBR2O15453 112 aa18.9■□□□□ 0.62
LIMD2-207ENST00000579329 PROP1O75360 226 aa18.9■□□□□ 0.62
LIMD2-207ENST00000579329 GABARAPO95166 117 aa18.9■□□□□ 0.62
LIMD2-207ENST00000579329 TFAP2AP05549 437 aa18.9■□□□□ 0.62
LIMD2-207ENST00000579329 SOX6P35712 828 aa18.9■□□□□ 0.62
LIMD2-207ENST00000579329 C10orf99Q6UWK7 81 aa18.9■□□□□ 0.62
LIMD2-207ENST00000579329 SAMD12Q8N8I0 201 aa18.9■□□□□ 0.62
LIMD2-207ENST00000579329 S100A16Q96FQ6 103 aaKnown RBP18.9■□□□□ 0.62
LIMD2-207ENST00000579329 AUNIPQ9H7T9 357 aa18.9■□□□□ 0.62
LIMD2-207ENST00000579329 KIAA1456Q9P272 454 aa18.9■□□□□ 0.62
LIMD2-207ENST00000579329 GAB2Q9UQC2 676 aa18.9■□□□□ 0.62
LIMD2-207ENST00000579329 ADARB2-AS1A8MUL3 147 aa18.89■□□□□ 0.61
LIMD2-207ENST00000579329 H7C2Y5 167 aa18.89■□□□□ 0.61
LIMD2-207ENST00000579329 M0R1X1 148 aa18.89■□□□□ 0.61
LIMD2-207ENST00000579329 RBBP9O75884 186 aa18.89■□□□□ 0.61
LIMD2-207ENST00000579329 SLC35B1P78383 322 aa18.89■□□□□ 0.61
LIMD2-207ENST00000579329 TCTEX1D4Q5JR98 221 aa18.89■□□□□ 0.61
LIMD2-207ENST00000579329 CNIH2Q6PI25 160 aa18.89■□□□□ 0.61
LIMD2-207ENST00000579329 STPG2Q8N412 459 aa18.89■□□□□ 0.61
LIMD2-207ENST00000579329 NPBQ8NG41 125 aa18.89■□□□□ 0.61
LIMD2-207ENST00000579329 RITA1Q96K30 269 aa18.89■□□□□ 0.61
LIMD2-207ENST00000579329 ZNF107Q9UII5 783 aaPredicted RBP18.89■□□□□ 0.61
LIMD2-207ENST00000579329 LINC00527Q9UJ94 153 aa18.89■□□□□ 0.61
LIMD2-207ENST00000579329 TCRBV4S1A1TA0A5B7 111 aa18.88■□□□□ 0.61
LIMD2-207ENST00000579329 LINC01548A6NM66 108 aa18.88■□□□□ 0.61
LIMD2-207ENST00000579329 XRCC3O43542 346 aa18.88■□□□□ 0.61
LIMD2-207ENST00000579329 NDUFA3O95167 84 aa18.88■□□□□ 0.61
LIMD2-207ENST00000579329 APOA2P02652 100 aa18.88■□□□□ 0.61
LIMD2-207ENST00000579329 CNTFRP26992 372 aa18.88■□□□□ 0.61
LIMD2-207ENST00000579329 ALDH3B2P48448 385 aa18.88■□□□□ 0.61
LIMD2-207ENST00000579329 GPR141Q7Z602 305 aa18.88■□□□□ 0.61
LIMD2-207ENST00000579329 ZNF329Q86UD4 541 aa18.88■□□□□ 0.61
LIMD2-207ENST00000579329 DRAXINQ8NBI3 349 aaPredicted RBP18.88■□□□□ 0.61
LIMD2-207ENST00000579329 HSPB9Q9BQS6 159 aa18.88■□□□□ 0.61
LIMD2-207ENST00000579329 NAA50Q9GZZ1 169 aaKnown RBP18.88■□□□□ 0.61
LIMD2-207ENST00000579329 ANXA10Q9UJ72 324 aa18.88■□□□□ 0.61
LIMD2-207ENST00000579329 TSSC4Q9Y5U2 329 aaPredicted RBP18.88■□□□□ 0.61
LIMD2-207ENST00000579329 NOTCH1P46531 2555 aa18.88■□□□□ 0.61
LIMD2-207ENST00000579329 C5orf64Q2M2E5 130 aa18.87■□□□□ 0.61
LIMD2-207ENST00000579329 GPR107Q5VW38 600 aa18.87■□□□□ 0.61
LIMD2-207ENST00000579329 ZNF383Q8NA42 475 aa18.87■□□□□ 0.61
LIMD2-207ENST00000579329 OR4F17Q8NGA8 305 aa18.87■□□□□ 0.61
LIMD2-207ENST00000579329 OR4F4Q96R69 305 aa18.87■□□□□ 0.61
LIMD2-207ENST00000579329 RNF5Q99942 180 aa18.87■□□□□ 0.61
LIMD2-207ENST00000579329 GON7Q9BXV9 100 aa18.87■□□□□ 0.61
LIMD2-207ENST00000579329 SDHAF2Q9NX18 166 aa18.87■□□□□ 0.61
LIMD2-207ENST00000579329 A0A1W2PRX2 142 aa18.86■□□□□ 0.61
LIMD2-207ENST00000579329 HLA-DRB1P01911 266 aa18.86■□□□□ 0.61
LIMD2-207ENST00000579329 CBX5P45973 191 aa18.86■□□□□ 0.61
LIMD2-207ENST00000579329 CTF1Q16619 201 aa18.86■□□□□ 0.61
LIMD2-207ENST00000579329 KHDC1LQ5JSQ8 128 aa18.86■□□□□ 0.61
LIMD2-207ENST00000579329 PDPNQ86YL7 162 aa18.86■□□□□ 0.61
LIMD2-207ENST00000579329 COMMD1Q8N668 190 aa18.86■□□□□ 0.61
LIMD2-207ENST00000579329 BEST4Q8NFU0 473 aa18.86■□□□□ 0.61
LIMD2-207ENST00000579329 ACOT12Q8WYK0 555 aa18.86■□□□□ 0.61
LIMD2-207ENST00000579329 R3HDM4Q96D70 268 aa18.86■□□□□ 0.61
LIMD2-207ENST00000579329 RORCP51449 518 aa18.85■□□□□ 0.61
LIMD2-207ENST00000579329 ARPC4P59998 168 aa18.85■□□□□ 0.61
LIMD2-207ENST00000579329 TMEM69Q5SWH9 247 aa18.85■□□□□ 0.61
LIMD2-207ENST00000579329 HOGA1Q86XE5 327 aa18.85■□□□□ 0.61
LIMD2-207ENST00000579329 SLC35D1Q9NTN3 355 aa18.85■□□□□ 0.61
LIMD2-207ENST00000579329 COMMD3Q9UBI1 195 aa18.85■□□□□ 0.61
LIMD2-207ENST00000579329 ZNF580Q9UK33 172 aa18.85■□□□□ 0.61
LIMD2-207ENST00000579329 OR2W1Q9Y3N9 320 aa18.85■□□□□ 0.61
LIMD2-207ENST00000579329 RRHO14718 337 aa18.84■□□□□ 0.61
LIMD2-207ENST00000579329 PTHLHP12272 177 aa18.84■□□□□ 0.61
LIMD2-207ENST00000579329 NFYAP23511 347 aaPredicted RBP18.84■□□□□ 0.61
LIMD2-207ENST00000579329 THBS3P49746 956 aa18.84■□□□□ 0.61
LIMD2-207ENST00000579329 LUMP51884 338 aaPredicted RBP18.84■□□□□ 0.61
LIMD2-207ENST00000579329 LINC00205P59089 165 aa18.84■□□□□ 0.61
LIMD2-207ENST00000579329 TAS2R20P59543 309 aa18.84■□□□□ 0.61
LIMD2-207ENST00000579329 LIN54Q6MZP7 749 aa18.84■□□□□ 0.61
LIMD2-207ENST00000579329 GVQW1Q8N7I0 195 aa18.84■□□□□ 0.61
LIMD2-207ENST00000579329 C5orf30Q96GV9 206 aa18.84■□□□□ 0.61
LIMD2-207ENST00000579329 CMTM3Q96MX0 182 aa18.84■□□□□ 0.61
LIMD2-207ENST00000579329 WNK1Q9H4A3 2382 aa18.84■□□□□ 0.61
LIMD2-207ENST00000579329 IGF1P05019 195 aa18.83■□□□□ 0.6
LIMD2-207ENST00000579329 VDAC1P21796 283 aa18.83■□□□□ 0.6
LIMD2-207ENST00000579329 TAGLNQ01995 201 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms