RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 AP4M1O00189 453 aa12.19□□□□□ -0.46
COMMD4-212ENST00000565517 XRCC3O43542 346 aa12.19□□□□□ -0.46
COMMD4-212ENST00000565517 SSX5O60225 188 aa12.19□□□□□ -0.46
COMMD4-212ENST00000565517 OPN1MWP04001 364 aa12.19□□□□□ -0.46
COMMD4-212ENST00000565517 OPN1MW2P0DN77 364 aa12.19□□□□□ -0.46
COMMD4-212ENST00000565517 OPN1MW3P0DN78 364 aa12.19□□□□□ -0.46
COMMD4-212ENST00000565517 VBP1P61758 197 aa12.19□□□□□ -0.46
COMMD4-212ENST00000565517 UBE2NLQ5JXB2 153 aa12.19□□□□□ -0.46
COMMD4-212ENST00000565517 CNIH2Q6PI25 160 aa12.19□□□□□ -0.46
COMMD4-212ENST00000565517 FAM131AQ6UXB0 335 aa12.19□□□□□ -0.46
COMMD4-212ENST00000565517 H1FOOQ8IZA3 346 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-212ENST00000565517 WASHC3Q9Y3C0 194 aa12.19□□□□□ -0.46
COMMD4-212ENST00000565517 ADARB2-AS1A8MUL3 147 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 NBR2O15453 112 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 RBBP9O75884 186 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 GABARAPO95166 117 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 NDUFA3O95167 84 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 TFAP2AP05549 437 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 OR8U9P0C7N5 309 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 SOX6P35712 828 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 ALDH3B2P48448 385 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 CTF1Q16619 201 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 TCTEX1D4Q5JR98 221 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 HIST2H2BDQ6DRA6 164 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 STPG2Q8N412 459 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 COMMD1Q8N668 190 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 OR8U1Q8NH10 309 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 RBMXL1Q96E39 390 aaKnown RBP12.18□□□□□ -0.46
COMMD4-212ENST00000565517 RITA1Q96K30 269 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 CMTM3Q96MX0 182 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 GON7Q9BXV9 100 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 AUNIPQ9H7T9 357 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 ANXA10Q9UJ72 324 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 ZNF580Q9UK33 172 aa12.18□□□□□ -0.46
COMMD4-212ENST00000565517 TSSC4Q9Y5U2 329 aaPredicted RBP12.18□□□□□ -0.46
COMMD4-212ENST00000565517 TCRBV4S1A1TA0A5B7 111 aa12.17□□□□□ -0.46
COMMD4-212ENST00000565517 LINC01548A6NM66 108 aa12.17□□□□□ -0.46
COMMD4-212ENST00000565517 CBX5P45973 191 aa12.17□□□□□ -0.46
COMMD4-212ENST00000565517 SLC35B1P78383 322 aa12.17□□□□□ -0.46
COMMD4-212ENST00000565517 TAGLNQ01995 201 aaKnown RBP12.17□□□□□ -0.46
COMMD4-212ENST00000565517 C5orf64Q2M2E5 130 aa12.17□□□□□ -0.46
COMMD4-212ENST00000565517 NSUN5P1Q3KNT7 163 aa12.17□□□□□ -0.46
COMMD4-212ENST00000565517 GLDNQ6ZMI3 551 aaPredicted RBP12.17□□□□□ -0.46
COMMD4-212ENST00000565517 SAMD12Q8N8I0 201 aa12.17□□□□□ -0.46
COMMD4-212ENST00000565517 ZNF383Q8NA42 475 aa12.17□□□□□ -0.46
COMMD4-212ENST00000565517 OR4F17Q8NGA8 305 aa12.17□□□□□ -0.46
COMMD4-212ENST00000565517 FAM110DQ8TAY7 271 aaPredicted RBP12.17□□□□□ -0.46
COMMD4-212ENST00000565517 ACOT12Q8WYK0 555 aa12.17□□□□□ -0.46
COMMD4-212ENST00000565517 NOL4LQ96MY1 436 aaPredicted RBP12.17□□□□□ -0.46
COMMD4-212ENST00000565517 OR4F4Q96R69 305 aa12.17□□□□□ -0.46
COMMD4-212ENST00000565517 OR2D2Q9H210 308 aa12.17□□□□□ -0.46
COMMD4-212ENST00000565517 SDHAF2Q9NX18 166 aa12.17□□□□□ -0.46
COMMD4-212ENST00000565517 KIAA1456Q9P272 454 aa12.17□□□□□ -0.46
COMMD4-212ENST00000565517 RBM7Q9Y580 266 aaKnown RBP12.17□□□□□ -0.46
COMMD4-212ENST00000565517 PLXNB1O43157 2135 aa12.16□□□□□ -0.46
COMMD4-212ENST00000565517 H7C2Y5 167 aa12.16□□□□□ -0.46
COMMD4-212ENST00000565517 M0R1X1 148 aa12.16□□□□□ -0.46
COMMD4-212ENST00000565517 HLA-DRB1P01911 266 aa12.16□□□□□ -0.46
COMMD4-212ENST00000565517 IGF1P05019 195 aa12.16□□□□□ -0.46
COMMD4-212ENST00000565517 CNTFRP26992 372 aa12.16□□□□□ -0.46
COMMD4-212ENST00000565517 RORCP51449 518 aa12.16□□□□□ -0.46
COMMD4-212ENST00000565517 C10orf99Q6UWK7 81 aa12.16□□□□□ -0.46
COMMD4-212ENST00000565517 GPR141Q7Z602 305 aa12.16□□□□□ -0.46
COMMD4-212ENST00000565517 HOGA1Q86XE5 327 aa12.16□□□□□ -0.46
COMMD4-212ENST00000565517 PDPNQ86YL7 162 aa12.16□□□□□ -0.46
COMMD4-212ENST00000565517 DRAXINQ8NBI3 349 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-212ENST00000565517 BEST4Q8NFU0 473 aa12.16□□□□□ -0.46
COMMD4-212ENST00000565517 HSPB9Q9BQS6 159 aa12.16□□□□□ -0.46
COMMD4-212ENST00000565517 NAA50Q9GZZ1 169 aaKnown RBP12.16□□□□□ -0.46
COMMD4-212ENST00000565517 ZNF107Q9UII5 783 aaPredicted RBP12.16□□□□□ -0.46
COMMD4-212ENST00000565517 OR2W1Q9Y3N9 320 aa12.16□□□□□ -0.46
COMMD4-212ENST00000565517 CMYA5Q8N3K9 4069 aa12.15□□□□□ -0.46
COMMD4-212ENST00000565517 RRHO14718 337 aa12.15□□□□□ -0.46
COMMD4-212ENST00000565517 SLC22A5O76082 557 aa12.15□□□□□ -0.46
COMMD4-212ENST00000565517 HLA-DQB1P01920 261 aa12.15□□□□□ -0.46
COMMD4-212ENST00000565517 APOA2P02652 100 aa12.15□□□□□ -0.46
COMMD4-212ENST00000565517 GPR107Q5VW38 600 aa12.15□□□□□ -0.46
COMMD4-212ENST00000565517 LIN54Q6MZP7 749 aa12.15□□□□□ -0.46
COMMD4-212ENST00000565517 ZNF329Q86UD4 541 aa12.15□□□□□ -0.46
COMMD4-212ENST00000565517 ADTRPQ96IZ2 230 aa12.15□□□□□ -0.46
COMMD4-212ENST00000565517 LINC00527Q9UJ94 153 aa12.15□□□□□ -0.46
COMMD4-212ENST00000565517 SPDEFO95238 335 aa12.14□□□□□ -0.47
COMMD4-212ENST00000565517 APOA1P02647 267 aa12.14□□□□□ -0.47
COMMD4-212ENST00000565517 OR5H8P0DN80 308 aa12.14□□□□□ -0.47
COMMD4-212ENST00000565517 THBS3P49746 956 aa12.14□□□□□ -0.47
COMMD4-212ENST00000565517 LUMP51884 338 aaPredicted RBP12.14□□□□□ -0.47
COMMD4-212ENST00000565517 LINC00205P59089 165 aa12.14□□□□□ -0.47
COMMD4-212ENST00000565517 TMEM69Q5SWH9 247 aa12.14□□□□□ -0.47
COMMD4-212ENST00000565517 TEX38Q6PEX7 206 aa12.14□□□□□ -0.47
COMMD4-212ENST00000565517 GVQW1Q8N7I0 195 aa12.14□□□□□ -0.47
COMMD4-212ENST00000565517 FLYWCH2Q96CP2 140 aaKnown RBP12.14□□□□□ -0.47
COMMD4-212ENST00000565517 R3HDM4Q96D70 268 aa12.14□□□□□ -0.47
COMMD4-212ENST00000565517 TSNAXQ99598 290 aaKnown RBP12.14□□□□□ -0.47
COMMD4-212ENST00000565517 SLC35D1Q9NTN3 355 aa12.14□□□□□ -0.47
COMMD4-212ENST00000565517 ZFP57Q9NU63 452 aa12.14□□□□□ -0.47
COMMD4-212ENST00000565517 COMMD3Q9UBI1 195 aa12.14□□□□□ -0.47
COMMD4-212ENST00000565517 IGHV7-81A0A0B4J1V7 117 aa12.13□□□□□ -0.47
COMMD4-212ENST00000565517 TUSC2O75896 110 aa12.13□□□□□ -0.47
COMMD4-212ENST00000565517 IGKV1-16P04430 117 aa12.13□□□□□ -0.47
COMMD4-212ENST00000565517 RRASP10301 218 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 325.7 ms