RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 PLSCR3Q9NRY6 295 aa7.88□□□□□ -1.15
CDH1-206ENST00000564676 LIN7CQ9NUP9 197 aaKnown RBP7.88□□□□□ -1.15
CDH1-206ENST00000564676 TRRAPQ9Y4A5 3859 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 TCRBV4S1A1TA0A5B7 111 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 PSMB11A5LHX3 300 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 OR5H14A6NHG9 310 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 H7C2Y5 167 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 J3QRK9 145 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 M0R1X1 148 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 SSX5O60225 188 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 TSPAN15O95858 294 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 IGHG2P01859 326 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 CTXN2P0C2S0 81 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 LORP23490 312 aaPredicted RBP7.87□□□□□ -1.15
CDH1-206ENST00000564676 MC5RP33032 325 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 UBE2NLQ5JXB2 153 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 GPR107Q5VW38 600 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 CNIH2Q6PI25 160 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 NDUFA11Q86Y39 141 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 SAMD12Q8N8I0 201 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 DRAXINQ8NBI3 349 aaPredicted RBP7.87□□□□□ -1.15
CDH1-206ENST00000564676 OR4X2Q8NGF9 303 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 WIPF2Q8TF74 440 aaPredicted RBP7.87□□□□□ -1.15
CDH1-206ENST00000564676 CHPT1Q8WUD6 406 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 NOL4LQ96MY1 436 aaPredicted RBP7.87□□□□□ -1.15
CDH1-206ENST00000564676 NAA50Q9GZZ1 169 aaKnown RBP7.87□□□□□ -1.15
CDH1-206ENST00000564676 OR2D2Q9H210 308 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 ABCG5Q9H222 651 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 MMP27Q9H306 513 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 ZFAND3Q9H8U3 227 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 KIAA1456Q9P272 454 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 LINC00527Q9UJ94 153 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 WASHC3Q9Y3C0 194 aa7.87□□□□□ -1.15
CDH1-206ENST00000564676 A0A1W2PRX2 142 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 LINC01548A6NM66 108 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 H0YJW9 148 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 NBR2O15453 112 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 KCNAB3O43448 404 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 XRCC3O43542 346 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 GABARAPO95166 117 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 APOA2P02652 100 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 OPN1MWP04001 364 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 TFAP2AP05549 437 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 OPN1MW2P0DN77 364 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 OPN1MW3P0DN78 364 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 CNTFRP26992 372 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 SOX6P35712 828 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 ALDH3B2P48448 385 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 RORCP51449 518 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 SLC35B1P78383 322 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 KHDC1LQ5JSQ8 128 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 C10orf99Q6UWK7 81 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 ZNF329Q86UD4 541 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 H1FOOQ8IZA3 346 aaPredicted RBP7.86□□□□□ -1.15
CDH1-206ENST00000564676 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.86□□□□□ -1.15
CDH1-206ENST00000564676 OR5AN1Q8NGI8 311 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 RITA1Q96K30 269 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 AUNIPQ9H7T9 357 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 COMMD3Q9UBI1 195 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 ANXA10Q9UJ72 324 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 GAB2Q9UQC2 676 aa7.86□□□□□ -1.15
CDH1-206ENST00000564676 SMIM31A0A1B0GVY4 71 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 AP4M1O00189 453 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 PROP1O75360 226 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 RBBP9O75884 186 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 FCER2P06734 321 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 PTHLHP12272 177 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 NFYAP23511 347 aaPredicted RBP7.85□□□□□ -1.15
CDH1-206ENST00000564676 CBX5P45973 191 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 LUMP51884 338 aaPredicted RBP7.85□□□□□ -1.15
CDH1-206ENST00000564676 LINC00205P59089 165 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 ARPC4P59998 168 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 RPS16P62249 146 aaKnown RBP7.85□□□□□ -1.15
CDH1-206ENST00000564676 CD83Q01151 205 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 PLGLAQ15195 96 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 CTF1Q16619 201 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 TMEM69Q5SWH9 247 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 MZT2AQ6P582 158 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 STPG2Q8N412 459 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 FAM71E2Q8N5Q1 922 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 GVQW1Q8N7I0 195 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 ZNF383Q8NA42 475 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 BEST4Q8NFU0 473 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 ACOT12Q8WYK0 555 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 R3HDM4Q96D70 268 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 SLC35D1Q9NTN3 355 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 SDHAF2Q9NX18 166 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 ZNF107Q9UII5 783 aaPredicted RBP7.85□□□□□ -1.15
CDH1-206ENST00000564676 TSSC4Q9Y5U2 329 aaPredicted RBP7.85□□□□□ -1.15
CDH1-206ENST00000564676 PLXNB1O43157 2135 aa7.85□□□□□ -1.15
CDH1-206ENST00000564676 MEIS3P1A6NDR6 274 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 VDAC1P21796 283 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 THBS3P49746 956 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 TAS2R20P59543 309 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 C5orf64Q2M2E5 130 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 TCTEX1D4Q5JR98 221 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 LIN54Q6MZP7 749 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 HOGA1Q86XE5 327 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 PDPNQ86YL7 162 aa7.84□□□□□ -1.15
CDH1-206ENST00000564676 CLVS1Q8IUQ0 354 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms