RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 TMEM50BP56557 158 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 CX3CL1P78423 397 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 ZNF260Q3ZCT1 412 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 AKIRIN2Q53H80 203 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 RPL39P5Q59GN2 51 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 C11orf87Q6NUJ2 197 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 ZNF562Q6V9R5 426 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 ZNF429Q86V71 674 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.66□□□□□ -0.54
SPG7-210ENST00000564409 FAM3DQ96BQ1 224 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 TSNAXQ99598 290 aaKnown RBP11.66□□□□□ -0.54
SPG7-210ENST00000564409 GFI1Q99684 422 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 MGLLQ99685 303 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 CMSS1Q9BQ75 279 aaKnown RBP11.66□□□□□ -0.54
SPG7-210ENST00000564409 CENPOQ9BU64 300 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 FBXL15Q9H469 300 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 GNB4Q9HAV0 340 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 RAB22AQ9UL26 194 aa11.66□□□□□ -0.54
SPG7-210ENST00000564409 AK6Q9Y3D8 172 aaKnown RBP11.66□□□□□ -0.54
SPG7-210ENST00000564409 TRDCB7Z8K6 153 aa11.65□□□□□ -0.54
SPG7-210ENST00000564409 DENRO43583 198 aaKnown RBP11.65□□□□□ -0.54
SPG7-210ENST00000564409 CALRP27797 417 aaKnown RBP11.65□□□□□ -0.54
SPG7-210ENST00000564409 CD40LGP29965 261 aa11.65□□□□□ -0.54
SPG7-210ENST00000564409 HSPA13P48723 471 aa11.65□□□□□ -0.54
SPG7-210ENST00000564409 VEGFCP49767 419 aa11.65□□□□□ -0.54
SPG7-210ENST00000564409 RPS25P62851 125 aaKnown RBP11.65□□□□□ -0.54
SPG7-210ENST00000564409 MRPS15P82914 257 aaKnown RBP11.65□□□□□ -0.54
SPG7-210ENST00000564409 PDPNQ86YL7 162 aa11.65□□□□□ -0.54
SPG7-210ENST00000564409 OR4A4PQ8NGN8 299 aa11.65□□□□□ -0.54
SPG7-210ENST00000564409 RBMXL1Q96E39 390 aaKnown RBP11.65□□□□□ -0.54
SPG7-210ENST00000564409 ARHGAP5-AS1Q96IT6 56 aa11.65□□□□□ -0.54
SPG7-210ENST00000564409 ABHD14BQ96IU4 210 aa11.65□□□□□ -0.54
SPG7-210ENST00000564409 PECRQ9BY49 303 aa11.65□□□□□ -0.54
SPG7-210ENST00000564409 CCDC90BQ9GZT6 254 aa11.65□□□□□ -0.54
SPG7-210ENST00000564409 TOLLIPQ9H0E2 274 aa11.65□□□□□ -0.54
SPG7-210ENST00000564409 BLOC1S6Q9UL45 172 aa11.65□□□□□ -0.54
SPG7-210ENST00000564409 ZNF256Q9Y2P7 627 aaPredicted RBP11.65□□□□□ -0.54
SPG7-210ENST00000564409 TRAV1-2A0A0B4J238 106 aa11.64□□□□□ -0.55
SPG7-210ENST00000564409 A0A1W2PN81 502 aa11.64□□□□□ -0.55
SPG7-210ENST00000564409 PDCD5O14737 125 aa11.64□□□□□ -0.55
SPG7-210ENST00000564409 LDLRAD4O15165 306 aa11.64□□□□□ -0.55
SPG7-210ENST00000564409 APOA2P02652 100 aa11.64□□□□□ -0.55
SPG7-210ENST00000564409 CHRNA7P36544 502 aa11.64□□□□□ -0.55
SPG7-210ENST00000564409 FABP5Q01469 135 aa11.64□□□□□ -0.55
SPG7-210ENST00000564409 TAGLNQ01995 201 aaKnown RBP11.64□□□□□ -0.55
SPG7-210ENST00000564409 TBCEQ15813 527 aaPredicted RBP11.64□□□□□ -0.55
SPG7-210ENST00000564409 ECSCRQ19T08 205 aa11.64□□□□□ -0.55
SPG7-210ENST00000564409 C2orf76Q3KRA6 126 aa11.64□□□□□ -0.55
SPG7-210ENST00000564409 PPP1R27Q86WC6 154 aa11.64□□□□□ -0.55
SPG7-210ENST00000564409 NRG4Q8WWG1 115 aa11.64□□□□□ -0.55
SPG7-210ENST00000564409 HDHD3Q9BSH5 251 aaPredicted RBP11.64□□□□□ -0.55
SPG7-210ENST00000564409 PARP12Q9H0J9 701 aaKnown RBP11.64□□□□□ -0.55
SPG7-210ENST00000564409 SLA2Q9H6Q3 261 aa11.64□□□□□ -0.55
SPG7-210ENST00000564409 OR1A1Q9P1Q5 309 aa11.64□□□□□ -0.55
SPG7-210ENST00000564409 GAB2Q9UQC2 676 aa11.64□□□□□ -0.55
SPG7-210ENST00000564409 ANKRD65E5RJM6 399 aa11.63□□□□□ -0.55
SPG7-210ENST00000564409 OVOL1O14753 267 aa11.63□□□□□ -0.55
SPG7-210ENST00000564409 TFAP2AP05549 437 aa11.63□□□□□ -0.55
SPG7-210ENST00000564409 LGALS1P09382 135 aaKnown RBP11.63□□□□□ -0.55
SPG7-210ENST00000564409 SCTP09683 121 aa11.63□□□□□ -0.55
SPG7-210ENST00000564409 CD3GP09693 182 aa11.63□□□□□ -0.55
SPG7-210ENST00000564409 GADD45AP24522 165 aa11.63□□□□□ -0.55
SPG7-210ENST00000564409 GNB1P62873 340 aa11.63□□□□□ -0.55
SPG7-210ENST00000564409 NDPQ00604 133 aa11.63□□□□□ -0.55
SPG7-210ENST00000564409 PSG5Q15238 335 aa11.63□□□□□ -0.55
SPG7-210ENST00000564409 ACTBL2Q562R1 376 aa11.63□□□□□ -0.55
SPG7-210ENST00000564409 ASPHD1Q5U4P2 390 aa11.63□□□□□ -0.55
SPG7-210ENST00000564409 GLDNQ6ZMI3 551 aaPredicted RBP11.63□□□□□ -0.55
SPG7-210ENST00000564409 ABHD5Q8WTS1 349 aa11.63□□□□□ -0.55
SPG7-210ENST00000564409 FLYWCH2Q96CP2 140 aaKnown RBP11.63□□□□□ -0.55
SPG7-210ENST00000564409 PRR25Q96S07 402 aa11.63□□□□□ -0.55
SPG7-210ENST00000564409 RDH8Q9NYR8 311 aa11.63□□□□□ -0.55
SPG7-210ENST00000564409 METTL1Q9UBP6 276 aaKnown RBP11.63□□□□□ -0.55
SPG7-210ENST00000564409 LINC01619G3V211 115 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 FCN1O00602 326 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 SOX15O60248 233 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 PROP1O75360 226 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 EGR2P11161 476 aaPredicted RBP11.62□□□□□ -0.55
SPG7-210ENST00000564409 RAB6AP20340 208 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 GALP22466 123 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 LGALS7P47929 136 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 RPS16P62249 146 aaKnown RBP11.62□□□□□ -0.55
SPG7-210ENST00000564409 PLAC9Q5JTB6 97 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 UNQ5815/PRO19632Q6UWF5 114 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 ZNF367Q7RTV3 350 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 DCUN1D4Q92564 292 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 RAB3CQ96E17 227 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 TMEM68Q96MH6 324 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 OR5B12Q96R08 314 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 FBXO7Q9Y3I1 522 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 U3KQK5 164 aa11.62□□□□□ -0.55
SPG7-210ENST00000564409 H3BUA1 57 aa11.61□□□□□ -0.55
SPG7-210ENST00000564409 FABP7O15540 132 aa11.61□□□□□ -0.55
SPG7-210ENST00000564409 IGKV1-16P04430 117 aa11.61□□□□□ -0.55
SPG7-210ENST00000564409 HSPB1P04792 205 aaKnown RBP11.61□□□□□ -0.55
SPG7-210ENST00000564409 CLDN12P56749 244 aa11.61□□□□□ -0.55
SPG7-210ENST00000564409 CBX3Q13185 183 aa11.61□□□□□ -0.55
SPG7-210ENST00000564409 ARL6IP1Q15041 203 aa11.61□□□□□ -0.55
SPG7-210ENST00000564409 SRSF7Q16629 238 aaKnown RBP eCLIP11.61□□□□□ -0.55
SPG7-210ENST00000564409 ZNF383Q8NA42 475 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms