RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 METTL1Q9UBP6 276 aaKnown RBP16.73■□□□□ 0.27
MSLN-205ENST00000563941 IGHV2OR16-5A0A0B4J2B6 119 aa16.73■□□□□ 0.27
MSLN-205ENST00000563941 IFNL4K9M1U5 179 aa16.73■□□□□ 0.27
MSLN-205ENST00000563941 RAB11AP62491 216 aa16.73■□□□□ 0.27
MSLN-205ENST00000563941 FAM180AQ6UWF9 173 aa16.73■□□□□ 0.27
MSLN-205ENST00000563941 C1QL4Q86Z23 238 aa16.73■□□□□ 0.27
MSLN-205ENST00000563941 CACNA1GO43497 2377 aa16.72■□□□□ 0.27
MSLN-205ENST00000563941 IGHV1-18A0A0C4DH31 117 aa16.72■□□□□ 0.27
MSLN-205ENST00000563941 OR5H1A6NKK0 313 aa16.72■□□□□ 0.27
MSLN-205ENST00000563941 IFNA17P01571 189 aa16.72■□□□□ 0.27
MSLN-205ENST00000563941 IGHV2-5P01817 119 aa16.72■□□□□ 0.27
MSLN-205ENST00000563941 FAM90A2PQ658T7 463 aa16.72■□□□□ 0.27
MSLN-205ENST00000563941 ZNF610Q8N9Z0 462 aa16.72■□□□□ 0.27
MSLN-205ENST00000563941 PINX1Q96BK5 328 aaKnown RBP16.72■□□□□ 0.27
MSLN-205ENST00000563941 LURAP1Q96LR2 239 aa16.72■□□□□ 0.27
MSLN-205ENST00000563941 OPN3Q9H1Y3 402 aaPredicted RBP16.72■□□□□ 0.27
MSLN-205ENST00000563941 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.72■□□□□ 0.27
MSLN-205ENST00000563941 CLN8Q9UBY8 286 aa16.72■□□□□ 0.27
MSLN-205ENST00000563941 CHD3Q12873 2000 aaKnown RBP16.72■□□□□ 0.27
MSLN-205ENST00000563941 OTOGLQ3ZCN5 2332 aa16.72■□□□□ 0.27
MSLN-205ENST00000563941 IGHV3-43A0A0B4J1X8 118 aa16.72■□□□□ 0.27
MSLN-205ENST00000563941 ZNF891A8MT65 544 aaPredicted RBP16.72■□□□□ 0.27
MSLN-205ENST00000563941 IGHV3-43DP0DP04 118 aa16.72■□□□□ 0.27
MSLN-205ENST00000563941 MBNL2Q5VZF2 373 aaKnown RBP16.72■□□□□ 0.27
MSLN-205ENST00000563941 RBMS3Q6XE24 437 aaKnown RBP16.72■□□□□ 0.27
MSLN-205ENST00000563941 EP300Q09472 2414 aaPredicted RBP16.71■□□□□ 0.27
MSLN-205ENST00000563941 TNFSF13O75888 250 aa16.71■□□□□ 0.27
MSLN-205ENST00000563941 S100A8P05109 93 aa16.71■□□□□ 0.27
MSLN-205ENST00000563941 ZNF343Q6P1L6 599 aa16.71■□□□□ 0.27
MSLN-205ENST00000563941 RFESDQ8TAC1 157 aa16.71■□□□□ 0.27
MSLN-205ENST00000563941 LRRC29Q8WV35 223 aa16.71■□□□□ 0.27
MSLN-205ENST00000563941 SIRT7Q9NRC8 400 aa16.71■□□□□ 0.27
MSLN-205ENST00000563941 USF3Q68DE3 2245 aa16.71■□□□□ 0.27
MSLN-205ENST00000563941 MAP1LC3B2A6NCE7 125 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 CLDN14O95500 239 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 RPS10P46783 165 aaKnown RBP16.7■□□□□ 0.26
MSLN-205ENST00000563941 ELOBQ15370 118 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 CD177Q8N6Q3 437 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 Q8WTZ3 238 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 MAP1LC3BQ9GZQ8 125 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 ZNF71Q9NQZ8 489 aaPredicted RBP16.7■□□□□ 0.26
MSLN-205ENST00000563941 PROCRQ9UNN8 238 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 TIMM9Q9Y5J7 89 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 DEFB108AA8MXU0 73 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 NQO2P16083 231 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 Q3ZCU0 254 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 TCTEX1D1Q8N7M0 179 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 CA5BP1Q8WTZ4 195 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 TAAR6Q96RI8 345 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 PARD6AQ9NPB6 346 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 DKK4Q9UBT3 224 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 PRRC2CQ9Y520 2896 aaKnown RBP16.7■□□□□ 0.26
MSLN-205ENST00000563941 CACNA1DQ01668 2161 aa16.7■□□□□ 0.26
MSLN-205ENST00000563941 INTS1Q8N201 2190 aaKnown RBP16.69■□□□□ 0.26
MSLN-205ENST00000563941 CXorf65A6NEN9 183 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 LINC00473A8K010 186 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 AHRRA9YTQ3 701 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 AP4M1O00189 453 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 RAB29O14966 203 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 ST8SIA5O15466 376 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 CD55P08174 381 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 DEFB109BQ30KR1 87 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 ZNF66Q6ZN08 573 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 BHLHA15Q7RTS1 189 aaPredicted RBP16.69■□□□□ 0.26
MSLN-205ENST00000563941 H2BFWTQ7Z2G1 175 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 DTD1Q8TEA8 209 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 STARD4Q96DR4 205 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 DCTN5Q9BTE1 182 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 PSG11Q9UQ72 335 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 URGCP-MRPS24S4R325 110 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 LOC400499M0QZD8 3231 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 A0A1B0GWJ7 208 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 ZG16O60844 167 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 CGAP01215 116 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 IGKV1D-33P01593 117 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 IGKV1-33P01594 117 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 CXCL1P09341 107 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 SMIM6P0DI80 62 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 LINC00205P59089 165 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 EDDM3AQ14507 147 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 HNF4GQ14541 408 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 MRGPRGQ86SM5 289 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 ZDHHC16Q969W1 377 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 P2RX4Q99571 388 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 TMEM147Q9BVK8 224 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 VAX2Q9UIW0 290 aa16.69■□□□□ 0.26
MSLN-205ENST00000563941 B4DEV8 164 aa16.68■□□□□ 0.26
MSLN-205ENST00000563941 C15orf65H3BRN8 121 aa16.68■□□□□ 0.26
MSLN-205ENST00000563941 SPINT2O43291 252 aa16.68■□□□□ 0.26
MSLN-205ENST00000563941 ERVFRD-1P60508 538 aa16.68■□□□□ 0.26
MSLN-205ENST00000563941 ATP6V1FQ16864 119 aa16.68■□□□□ 0.26
MSLN-205ENST00000563941 CENPVQ7Z7K6 275 aaPredicted RBP16.68■□□□□ 0.26
MSLN-205ENST00000563941 OR2Z1Q8NG97 314 aa16.68■□□□□ 0.26
MSLN-205ENST00000563941 HSD17B10Q99714 261 aaKnown RBP16.68■□□□□ 0.26
MSLN-205ENST00000563941 LAMP3Q9UQV4 416 aa16.68■□□□□ 0.26
MSLN-205ENST00000563941 PTPRBP23467 1997 aa16.68■□□□□ 0.26
MSLN-205ENST00000563941 PMS2P5A8MQ11 134 aa16.67■□□□□ 0.26
MSLN-205ENST00000563941 CEBPZOSA8MTT3 80 aa16.67■□□□□ 0.26
MSLN-205ENST00000563941 IFNA1P01562 189 aa16.67■□□□□ 0.26
MSLN-205ENST00000563941 EGR1P18146 543 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms