RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 HOGA1Q86XE5 327 aa4.58□□□□□ -1.68
LINC01963-201ENST00000562038 FAM216BQ8N7L0 139 aa4.58□□□□□ -1.68
LINC01963-201ENST00000562038 ZNF486Q96H40 463 aaPredicted RBP4.58□□□□□ -1.68
LINC01963-201ENST00000562038 C19orf24Q9BVV8 132 aa4.58□□□□□ -1.68
LINC01963-201ENST00000562038 TTTY10Q9BZA0 68 aa4.58□□□□□ -1.68
LINC01963-201ENST00000562038 DPAGT1Q9H3H5 408 aa4.58□□□□□ -1.68
LINC01963-201ENST00000562038 GPN1Q9HCN4 374 aaPredicted RBP4.58□□□□□ -1.68
LINC01963-201ENST00000562038 PLCE1Q9P212 2302 aa4.58□□□□□ -1.68
LINC01963-201ENST00000562038 ING4Q9UNL4 249 aa4.58□□□□□ -1.68
LINC01963-201ENST00000562038 PRRC2CQ9Y520 2896 aaKnown RBP4.58□□□□□ -1.68
LINC01963-201ENST00000562038 TRBV6-7A0A0A0MS04 114 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 A0A0A6YYD4 124 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 SHISA3A0PJX4 238 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 NPFFO15130 113 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 FGF16O43320 207 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 PSPNO60542 156 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 AP3S2P59780 193 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 SURF2Q15527 256 aaPredicted RBP4.57□□□□□ -1.68
LINC01963-201ENST00000562038 KLF17Q5JT82 389 aaPredicted RBP4.57□□□□□ -1.68
LINC01963-201ENST00000562038 VAX1Q5SQQ9 334 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 C22orf42Q6IC83 251 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 Q6ZTK2 550 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 ZNF546Q86UE3 836 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 CIARTQ8N365 385 aaPredicted RBP4.57□□□□□ -1.68
LINC01963-201ENST00000562038 JAGN1Q8N5M9 183 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 Q8N6K4 173 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 ZNF418Q8TF45 676 aaPredicted RBP4.57□□□□□ -1.68
LINC01963-201ENST00000562038 MITD1Q8WV92 249 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 SLC25A38Q96DW6 304 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 AKR1E2Q96JD6 320 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 MCRIP2Q9BUT9 160 aaKnown RBP4.57□□□□□ -1.68
LINC01963-201ENST00000562038 PPP1R3EQ9H7J1 279 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 SLC2A8Q9NY64 477 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 TAS2R8Q9NYW2 309 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 KCNIP1Q9NZI2 227 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 ABCA4P78363 2273 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 CENPVL3A0A0U1RRI6 287 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 LEUTXA8MZ59 168 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 HAX1O00165 279 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 RBFOX2O43251 390 aaKnown RBP eCLIP4.57□□□□□ -1.68
LINC01963-201ENST00000562038 HSPA12AO43301 675 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 CDRT1O95170 752 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 LY86O95711 162 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 SLC6A1P30531 599 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 SDC2P34741 201 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 MEOX2P50222 304 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 SEC61GP60059 68 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 IKZF1Q13422 519 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 IL18Q14116 193 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 HLA-DRB5Q30154 266 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 ANKRD55Q3KP44 614 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 DHRS7BQ6IAN0 325 aaPredicted RBP4.57□□□□□ -1.68
LINC01963-201ENST00000562038 TEX38Q6PEX7 206 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 C19orf35Q6ZS72 473 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 VMO1Q7Z5L0 202 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 NR2C2APQ86WQ0 139 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 ZCCHC24Q8N2G6 241 aaKnown RBP4.57□□□□□ -1.68
LINC01963-201ENST00000562038 TRMT10AQ8TBZ6 339 aaKnown RBP4.57□□□□□ -1.68
LINC01963-201ENST00000562038 SSMEM1Q8WWF3 244 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 DYRK2Q92630 601 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 WDR13Q9H1Z4 485 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 OR51E2Q9H255 320 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 PITPNC1Q9UKF7 332 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 TSSC4Q9Y5U2 329 aaPredicted RBP4.57□□□□□ -1.68
LINC01963-201ENST00000562038 PEX16Q9Y5Y5 336 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 PCLOQ9Y6V0 5065 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 F8VVB4 439 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 F8VWA3 439 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 VENTXO95231 258 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 HLA-DQB1P01920 261 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 MAS1P04201 325 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 CD74P04233 296 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 FBP1P09467 338 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 SRD5A1P18405 259 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 HOXA1P49639 335 aaPredicted RBP4.57□□□□□ -1.68
LINC01963-201ENST00000562038 LGALS4P56470 323 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 TAS2R46P59540 309 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 RND3P61587 244 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 LRRC75BQ2VPJ9 315 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 KHDC1LQ5JSQ8 128 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 ZFP41Q8N8Y5 198 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 PLPPR1Q8TBJ4 325 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 SCARB1Q8WTV0 552 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 RAB3CQ96E17 227 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 S100A16Q96FQ6 103 aaKnown RBP4.57□□□□□ -1.68
LINC01963-201ENST00000562038 KIRREL1Q96J84 757 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 MMP28Q9H239 520 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 AUNIPQ9H7T9 357 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 MMP26Q9NRE1 261 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 PIPOXQ9P0Z9 390 aa4.57□□□□□ -1.68
LINC01963-201ENST00000562038 IGHV2-26A0A0B4J1V2 119 aa4.56□□□□□ -1.68
LINC01963-201ENST00000562038 OR5H14A6NHG9 310 aa4.56□□□□□ -1.68
LINC01963-201ENST00000562038 LYNX1G3V0Z9 82 aa4.56□□□□□ -1.68
LINC01963-201ENST00000562038 GEMIN2O14893 280 aaKnown RBP4.56□□□□□ -1.68
LINC01963-201ENST00000562038 TCF21O43680 179 aa4.56□□□□□ -1.68
LINC01963-201ENST00000562038 FCGR3AP08637 254 aa4.56□□□□□ -1.68
LINC01963-201ENST00000562038 LYNX1P0DP58 116 aa4.56□□□□□ -1.68
LINC01963-201ENST00000562038 EPHA1P21709 976 aa4.56□□□□□ -1.68
LINC01963-201ENST00000562038 FAM3BP58499 235 aaPredicted RBP4.56□□□□□ -1.68
LINC01963-201ENST00000562038 RAB4BP61018 213 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms