RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 NOTOA8MTQ0 251 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 OPN1MWP04001 364 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 FCGR3AP08637 254 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 OPN1MW2P0DN77 364 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 OPN1MW3P0DN78 364 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 IGLL1P15814 213 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 ZBTB25P24278 435 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 RAB25P57735 213 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 SLC35B1P78383 322 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 EBI3Q14213 229 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 SFXN4Q6P4A7 337 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 STPG2Q8N412 459 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 Q8N6K4 173 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 ST6GALNAC5Q9BVH7 336 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 PARP11Q9NR21 331 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 PLSCR3Q9NRY6 295 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 RDH8Q9NYR8 311 aa9.47□□□□□ -0.89
TPM1-216ENST00000558910 IGKV1D-8A0A087WSZ0 117 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 TMEM235A6NFC5 223 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.46□□□□□ -0.9
TPM1-216ENST00000558910 RAB27BO00194 218 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 RAB29O14966 203 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 FABP7O15540 132 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 IGHG2P01859 326 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 OR8U9P0C7N5 309 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 CT45A6P0DMU7 189 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 CT45A5P0DMU8 189 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 CT45A7P0DMV0 189 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 HIST1H1DP16402 221 aaKnown RBP9.46□□□□□ -0.9
TPM1-216ENST00000558910 VAMP1P23763 118 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 SOX6P35712 828 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 ZNF137PP52743 207 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 KCTD21Q4G0X4 260 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 ZNF833PQ6ZTB9 187 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 ZNF554Q86TJ5 538 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 KLHL30-AS1Q8NEE0 82 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 TSPAN14Q8NG11 270 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 OR5H6Q8NGV6 325 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 OR8U1Q8NH10 309 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 CHPT1Q8WUD6 406 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 NUDCD2Q8WVJ2 157 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 GINS4Q9BRT9 223 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 ABCG5Q9H222 651 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 FBXL15Q9H469 300 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 LIN7CQ9NUP9 197 aaKnown RBP9.46□□□□□ -0.9
TPM1-216ENST00000558910 PIPOXQ9P0Z9 390 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 KIAA1456Q9P272 454 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 ZNF107Q9UII5 783 aaPredicted RBP9.46□□□□□ -0.9
TPM1-216ENST00000558910 ZNF221Q9UK13 617 aa9.46□□□□□ -0.9
TPM1-216ENST00000558910 TRBV6-6A0A0A6YYG2 114 aa9.45□□□□□ -0.9
TPM1-216ENST00000558910 M0R1X1 148 aa9.45□□□□□ -0.9
TPM1-216ENST00000558910 AP4M1O00189 453 aa9.45□□□□□ -0.9
TPM1-216ENST00000558910 MFNGO00587 321 aa9.45□□□□□ -0.9
TPM1-216ENST00000558910 NBR2O15453 112 aa9.45□□□□□ -0.9
TPM1-216ENST00000558910 VDAC1P21796 283 aa9.45□□□□□ -0.9
TPM1-216ENST00000558910 FGF9P31371 208 aaPredicted RBP9.45□□□□□ -0.9
TPM1-216ENST00000558910 RANBP1P43487 201 aa9.45□□□□□ -0.9
TPM1-216ENST00000558910 RPS16P62249 146 aaKnown RBP9.45□□□□□ -0.9
TPM1-216ENST00000558910 ECSCRQ19T08 205 aa9.45□□□□□ -0.9
TPM1-216ENST00000558910 DEFB136Q30KP8 78 aa9.45□□□□□ -0.9
TPM1-216ENST00000558910 OR10J5Q8NHC4 309 aa9.45□□□□□ -0.9
TPM1-216ENST00000558910 CASTOR1Q8WTX7 329 aa9.45□□□□□ -0.9
TPM1-216ENST00000558910 PHF21AQ96BD5 680 aa9.45□□□□□ -0.9
TPM1-216ENST00000558910 OR5B12Q96R08 314 aa9.45□□□□□ -0.9
TPM1-216ENST00000558910 OR2D2Q9H210 308 aa9.45□□□□□ -0.9
TPM1-216ENST00000558910 MGAT4AQ9UM21 535 aa9.45□□□□□ -0.9
TPM1-216ENST00000558910 A0A087WXM4 84 aa9.44□□□□□ -0.9
TPM1-216ENST00000558910 KRTAP9-6A0A140TA67 174 aa9.44□□□□□ -0.9
TPM1-216ENST00000558910 MEIS3P1A6NDR6 274 aa9.44□□□□□ -0.9
TPM1-216ENST00000558910 G3V318 75 aa9.44□□□□□ -0.9
TPM1-216ENST00000558910 PTHLHP12272 177 aa9.44□□□□□ -0.9
TPM1-216ENST00000558910 GALP22466 123 aa9.44□□□□□ -0.9
TPM1-216ENST00000558910 GNG2P59768 71 aa9.44□□□□□ -0.9
TPM1-216ENST00000558910 RPL23AP62750 156 aaKnown RBP9.44□□□□□ -0.9
TPM1-216ENST00000558910 PDLIM3Q53GG5 364 aaPredicted RBP9.44□□□□□ -0.9
TPM1-216ENST00000558910 TPRA1Q86W33 373 aa9.44□□□□□ -0.9
TPM1-216ENST00000558910 FAM71E2Q8N5Q1 922 aa9.44□□□□□ -0.9
TPM1-216ENST00000558910 OR4A4PQ8NGN8 299 aa9.44□□□□□ -0.9
TPM1-216ENST00000558910 VCX3AQ9NNX9 186 aa9.44□□□□□ -0.9
TPM1-216ENST00000558910 TRAV18A0A075B6X5 111 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 H0YJW9 148 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 FCN1O00602 326 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 ATP6V0E1O15342 81 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 AIREO43918 545 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 TNFAIP8O95379 198 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 NFYAP23511 347 aaPredicted RBP9.43□□□□□ -0.9
TPM1-216ENST00000558910 GNB1P62873 340 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 TAGLNQ01995 201 aaKnown RBP9.43□□□□□ -0.9
TPM1-216ENST00000558910 KIR2DS1Q14954 304 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 PNLIPRP3Q17RR3 467 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 C5orf64Q2M2E5 130 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 LIN54Q6MZP7 749 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 ZNF383Q8NA42 475 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 AGMATQ9BSE5 352 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 FAM103A1Q9BTL3 118 aaKnown RBP9.43□□□□□ -0.9
TPM1-216ENST00000558910 RHBDL2Q9NX52 303 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 WASHC3Q9Y3C0 194 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 TGP01266 2768 aa9.43□□□□□ -0.9
TPM1-216ENST00000558910 PRKDCP78527 4128 aaKnown RBP9.43□□□□□ -0.9
TPM1-216ENST00000558910 TFAP2AP05549 437 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms