RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 ACTBP60709 375 aa12.56□□□□□ -0.4
TUBB3-214ENST00000557490 NSUN5P1Q3KNT7 163 aa12.56□□□□□ -0.4
TUBB3-214ENST00000557490 GPR107Q5VW38 600 aa12.56□□□□□ -0.4
TUBB3-214ENST00000557490 FAM131AQ6UXB0 335 aa12.56□□□□□ -0.4
TUBB3-214ENST00000557490 NDUFA11Q86Y39 141 aa12.56□□□□□ -0.4
TUBB3-214ENST00000557490 SAMD12Q8N8I0 201 aa12.56□□□□□ -0.4
TUBB3-214ENST00000557490 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.56□□□□□ -0.4
TUBB3-214ENST00000557490 OR4X2Q8NGF9 303 aa12.56□□□□□ -0.4
TUBB3-214ENST00000557490 OR8U1Q8NH10 309 aa12.56□□□□□ -0.4
TUBB3-214ENST00000557490 CHPT1Q8WUD6 406 aa12.56□□□□□ -0.4
TUBB3-214ENST00000557490 RBMXL1Q96E39 390 aaKnown RBP12.56□□□□□ -0.4
TUBB3-214ENST00000557490 CITED2Q99967 270 aaPredicted RBP12.56□□□□□ -0.4
TUBB3-214ENST00000557490 ABCG5Q9H222 651 aa12.56□□□□□ -0.4
TUBB3-214ENST00000557490 PSMB11A5LHX3 300 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 H0YJW9 148 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 H7C2Y5 167 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 M0R1X1 148 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 XRCC3O43542 346 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 GABARAPO95166 117 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 TSPAN15O95858 294 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 TFAP2AP05549 437 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 SOX6P35712 828 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 CNIH2Q6PI25 160 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 GLDNQ6ZMI3 551 aaPredicted RBP12.55□□□□□ -0.4
TUBB3-214ENST00000557490 H1FOOQ8IZA3 346 aaPredicted RBP12.55□□□□□ -0.4
TUBB3-214ENST00000557490 FAM71E2Q8N5Q1 922 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 FAM110DQ8TAY7 271 aaPredicted RBP12.55□□□□□ -0.4
TUBB3-214ENST00000557490 OR2D2Q9H210 308 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 AUNIPQ9H7T9 357 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 KIAA1456Q9P272 454 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 GAB2Q9UQC2 676 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 WASHC3Q9Y3C0 194 aa12.55□□□□□ -0.4
TUBB3-214ENST00000557490 TCRBV4S1A1TA0A5B7 111 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 AP4M1O00189 453 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 NBR2O15453 112 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 RBBP9O75884 186 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 APOA2P02652 100 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 OPN1MWP04001 364 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 OPN1MW2P0DN77 364 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 OPN1MW3P0DN78 364 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 ALDH3B2P48448 385 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 RORCP51449 518 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 SLC35B1P78383 322 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 DRAXINQ8NBI3 349 aaPredicted RBP12.54□□□□□ -0.4
TUBB3-214ENST00000557490 OR5AN1Q8NGI8 311 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 ACOT12Q8WYK0 555 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 RITA1Q96K30 269 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 NOL4LQ96MY1 436 aaPredicted RBP12.54□□□□□ -0.4
TUBB3-214ENST00000557490 NAA50Q9GZZ1 169 aaKnown RBP12.54□□□□□ -0.4
TUBB3-214ENST00000557490 COMMD3Q9UBI1 195 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 ANXA10Q9UJ72 324 aa12.54□□□□□ -0.4
TUBB3-214ENST00000557490 CBX5P45973 191 aa12.53□□□□□ -0.4
TUBB3-214ENST00000557490 ARPC4P59998 168 aa12.53□□□□□ -0.4
TUBB3-214ENST00000557490 CD83Q01151 205 aa12.53□□□□□ -0.4
TUBB3-214ENST00000557490 CTF1Q16619 201 aa12.53□□□□□ -0.4
TUBB3-214ENST00000557490 TMEM69Q5SWH9 247 aa12.53□□□□□ -0.4
TUBB3-214ENST00000557490 ZNF329Q86UD4 541 aa12.53□□□□□ -0.4
TUBB3-214ENST00000557490 STPG2Q8N412 459 aa12.53□□□□□ -0.4
TUBB3-214ENST00000557490 NPBQ8NG41 125 aa12.53□□□□□ -0.4
TUBB3-214ENST00000557490 GON7Q9BXV9 100 aa12.53□□□□□ -0.4
TUBB3-214ENST00000557490 SDHAF2Q9NX18 166 aa12.53□□□□□ -0.4
TUBB3-214ENST00000557490 ZNF107Q9UII5 783 aaPredicted RBP12.53□□□□□ -0.4
TUBB3-214ENST00000557490 LINC00527Q9UJ94 153 aa12.53□□□□□ -0.4
TUBB3-214ENST00000557490 TET2Q6N021 2002 aaPredicted RBP12.53□□□□□ -0.4
TUBB3-214ENST00000557490 LINC01548A6NM66 108 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 PROP1O75360 226 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 CNTFRP26992 372 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 C5orf64Q2M2E5 130 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 KHDC1LQ5JSQ8 128 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 C10orf99Q6UWK7 81 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 HOGA1Q86XE5 327 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 COMMD1Q8N668 190 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 ZNF383Q8NA42 475 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 BEST4Q8NFU0 473 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 OR4F17Q8NGA8 305 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 AP3S1Q92572 193 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 CMTM3Q96MX0 182 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 OR4F4Q96R69 305 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 RNF5Q99942 180 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 OR2W1Q9Y3N9 320 aa12.52□□□□□ -0.41
TUBB3-214ENST00000557490 TSSC4Q9Y5U2 329 aaPredicted RBP12.52□□□□□ -0.41
TUBB3-214ENST00000557490 SMIM31A0A1B0GVY4 71 aa12.51□□□□□ -0.41
TUBB3-214ENST00000557490 A0A1W2PRX2 142 aa12.51□□□□□ -0.41
TUBB3-214ENST00000557490 J3QRK9 145 aa12.51□□□□□ -0.41
TUBB3-214ENST00000557490 NDUFA3O95167 84 aa12.51□□□□□ -0.41
TUBB3-214ENST00000557490 PTHLHP12272 177 aa12.51□□□□□ -0.41
TUBB3-214ENST00000557490 NFYAP23511 347 aaPredicted RBP12.51□□□□□ -0.41
TUBB3-214ENST00000557490 THBS3P49746 956 aa12.51□□□□□ -0.41
TUBB3-214ENST00000557490 LUMP51884 338 aaPredicted RBP12.51□□□□□ -0.41
TUBB3-214ENST00000557490 TAS2R20P59543 309 aa12.51□□□□□ -0.41
TUBB3-214ENST00000557490 TAGLNQ01995 201 aaKnown RBP12.51□□□□□ -0.41
TUBB3-214ENST00000557490 PLGLAQ15195 96 aa12.51□□□□□ -0.41
TUBB3-214ENST00000557490 TCTEX1D4Q5JR98 221 aa12.51□□□□□ -0.41
TUBB3-214ENST00000557490 LIN54Q6MZP7 749 aa12.51□□□□□ -0.41
TUBB3-214ENST00000557490 MZT2AQ6P582 158 aa12.51□□□□□ -0.41
TUBB3-214ENST00000557490 PDPNQ86YL7 162 aa12.51□□□□□ -0.41
TUBB3-214ENST00000557490 GVQW1Q8N7I0 195 aa12.51□□□□□ -0.41
TUBB3-214ENST00000557490 R3HDM4Q96D70 268 aa12.51□□□□□ -0.41
TUBB3-214ENST00000557490 TSNAXQ99598 290 aaKnown RBP12.51□□□□□ -0.41
TUBB3-214ENST00000557490 HSPB9Q9BQS6 159 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms