RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 METTL21EPA6NDL7 271 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 H0YJW9 148 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 K7EIL1 84 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 RRHO14718 337 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 SPDEFO95238 335 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 GSTP1P09211 210 aaKnown RBP9.85□□□□□ -0.83
SNX6-207ENST00000556303 SCTP09683 121 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 RAB3BP20337 219 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 CLDN12P56749 244 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 KRTAP10-11P60412 298 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 TAGLNQ01995 201 aaKnown RBP9.85□□□□□ -0.83
SNX6-207ENST00000556303 TMEM267Q0VDI3 215 aaPredicted RBP9.85□□□□□ -0.83
SNX6-207ENST00000556303 FHL3Q13643 280 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 PLAC9Q5JTB6 97 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 FAM131AQ6UXB0 335 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 LCNL1Q6ZST4 164 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 OR10R2Q8NGX6 335 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 FCGR1BQ92637 280 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 RITA1Q96K30 269 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 HDHD3Q9BSH5 251 aaPredicted RBP9.85□□□□□ -0.83
SNX6-207ENST00000556303 ZNF221Q9UK13 617 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 RNF150Q9ULK6 438 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 VSIG4Q9Y279 399 aa9.85□□□□□ -0.83
SNX6-207ENST00000556303 SORL1Q92673 2214 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 TRAV41A0A0B4J266 112 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 ATP6V0E1O15342 81 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 CD3GP09693 182 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 CNTFRP26992 372 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 FGF9P31371 208 aaPredicted RBP9.84□□□□□ -0.83
SNX6-207ENST00000556303 RAB9AP51151 201 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 KIAA0141Q14154 515 aaPredicted RBP9.84□□□□□ -0.83
SNX6-207ENST00000556303 RPL39P5Q59GN2 51 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 C9orf66Q5T8R8 295 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 HES5Q5TA89 166 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 UBE2UQ5VVX9 321 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 PYHIN1Q6K0P9 492 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 ZNF562Q6V9R5 426 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 Q6ZS49 121 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 PDPNQ86YL7 162 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 ZNF491Q8N8L2 437 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 ABHD14BQ96IU4 210 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 TSNAXQ99598 290 aaKnown RBP9.84□□□□□ -0.83
SNX6-207ENST00000556303 CABLES2Q9BTV7 478 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 RDH8Q9NYR8 311 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 OR1A1Q9P1Q5 309 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 KCNK7Q9Y2U2 307 aa9.84□□□□□ -0.83
SNX6-207ENST00000556303 H7C2Y5 167 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 I3L521 148 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 RAB27BO00194 218 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 FABP7O15540 132 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 ATP6V1G2O95670 118 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 TFAP2AP05549 437 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 OR8U8P0C7N1 319 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 INSL3P51460 131 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 CX3CL1P78423 397 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 DGCR2P98153 550 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 PLGLAQ15195 96 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 AKIRIN2Q53H80 203 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 TPRA1Q86W33 373 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 OR11H1Q8NG94 326 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 PARP12Q9H0J9 701 aaKnown RBP9.83□□□□□ -0.84
SNX6-207ENST00000556303 PARP11Q9NR21 331 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 NUBP2Q9Y5Y2 271 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 WSB1Q9Y6I7 421 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 TENM3Q9P273 2699 aa9.83□□□□□ -0.84
SNX6-207ENST00000556303 TRBV6-7A0A0A0MS04 114 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 IGKV1-6A0A0C4DH72 117 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 WI2-2373I1.2A0A1W2PRP0 233 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 SHISA3A0PJX4 238 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 G3V318 75 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 MFNGO00587 321 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 PROP1O75360 226 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 SCGNO76038 276 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 APOA2P02652 100 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 FCGR3AP08637 254 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 HIST1H1DP16402 221 aaKnown RBP9.82□□□□□ -0.84
SNX6-207ENST00000556303 CD40LGP29965 261 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 HOXD3P31249 432 aaPredicted RBP9.82□□□□□ -0.84
SNX6-207ENST00000556303 LGALS7P47929 136 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 LUMP51884 338 aaPredicted RBP9.82□□□□□ -0.84
SNX6-207ENST00000556303 C19orf54Q5BKX5 351 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 SPARTQ8N0X7 666 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 OR10J5Q8NHC4 309 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 FLYWCH2Q96CP2 140 aaKnown RBP9.82□□□□□ -0.84
SNX6-207ENST00000556303 FBXL15Q9H469 300 aa9.82□□□□□ -0.84
SNX6-207ENST00000556303 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.82□□□□□ -0.84
SNX6-207ENST00000556303 FOXA2Q9Y261 457 aaPredicted RBP9.82□□□□□ -0.84
SNX6-207ENST00000556303 NOTOA8MTQ0 251 aa9.81□□□□□ -0.84
SNX6-207ENST00000556303 ARPC1BO15143 372 aaKnown RBP9.81□□□□□ -0.84
SNX6-207ENST00000556303 RRASP10301 218 aa9.81□□□□□ -0.84
SNX6-207ENST00000556303 GNB3P16520 340 aa9.81□□□□□ -0.84
SNX6-207ENST00000556303 DTYMKP23919 212 aa9.81□□□□□ -0.84
SNX6-207ENST00000556303 TALDO1P37837 337 aa9.81□□□□□ -0.84
SNX6-207ENST00000556303 RAB25P57735 213 aa9.81□□□□□ -0.84
SNX6-207ENST00000556303 OR10A3P58181 314 aa9.81□□□□□ -0.84
SNX6-207ENST00000556303 ZNF616Q08AN1 781 aa9.81□□□□□ -0.84
SNX6-207ENST00000556303 PLA2G7Q13093 441 aa9.81□□□□□ -0.84
SNX6-207ENST00000556303 PSG5Q15238 335 aa9.81□□□□□ -0.84
SNX6-207ENST00000556303 DEFB136Q30KP8 78 aa9.81□□□□□ -0.84
SNX6-207ENST00000556303 MOGAT2Q3SYC2 334 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms