RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 RPL5P46777 297 aaKnown RBP18.44■□□□□ 0.54
NEK9-203ENST00000553945 TAS2R20P59543 309 aa18.44■□□□□ 0.54
NEK9-203ENST00000553945 ACTBP60709 375 aa18.44■□□□□ 0.54
NEK9-203ENST00000553945 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.44■□□□□ 0.54
NEK9-203ENST00000553945 WIPF2Q8TF74 440 aaPredicted RBP18.44■□□□□ 0.54
NEK9-203ENST00000553945 RITA1Q96K30 269 aa18.44■□□□□ 0.54
NEK9-203ENST00000553945 LIN7CQ9NUP9 197 aaKnown RBP18.44■□□□□ 0.54
NEK9-203ENST00000553945 TET2Q6N021 2002 aaPredicted RBP18.44■□□□□ 0.54
NEK9-203ENST00000553945 OR5H14A6NHG9 310 aa18.43■□□□□ 0.54
NEK9-203ENST00000553945 H7C2Y5 167 aa18.43■□□□□ 0.54
NEK9-203ENST00000553945 HPGDSO60760 199 aa18.43■□□□□ 0.54
NEK9-203ENST00000553945 APOA1P02647 267 aa18.43■□□□□ 0.54
NEK9-203ENST00000553945 FCER2P06734 321 aa18.43■□□□□ 0.54
NEK9-203ENST00000553945 MC5RP33032 325 aa18.43■□□□□ 0.54
NEK9-203ENST00000553945 MMDQ15546 238 aa18.43■□□□□ 0.54
NEK9-203ENST00000553945 MZT2AQ6P582 158 aa18.43■□□□□ 0.54
NEK9-203ENST00000553945 SLC35E3Q7Z769 313 aa18.43■□□□□ 0.54
NEK9-203ENST00000553945 HOGA1Q86XE5 327 aa18.43■□□□□ 0.54
NEK9-203ENST00000553945 BEST4Q8NFU0 473 aa18.43■□□□□ 0.54
NEK9-203ENST00000553945 AP3S1Q92572 193 aa18.43■□□□□ 0.54
NEK9-203ENST00000553945 MEIS3P1A6NDR6 274 aa18.42■□□□□ 0.54
NEK9-203ENST00000553945 H0YJW9 148 aa18.42■□□□□ 0.54
NEK9-203ENST00000553945 J3QRK9 145 aa18.42■□□□□ 0.54
NEK9-203ENST00000553945 ZNF182P17025 639 aaPredicted RBP18.42■□□□□ 0.54
NEK9-203ENST00000553945 NFYAP23511 347 aaPredicted RBP18.42■□□□□ 0.54
NEK9-203ENST00000553945 CNTFRP26992 372 aa18.42■□□□□ 0.54
NEK9-203ENST00000553945 CBX5P45973 191 aa18.42■□□□□ 0.54
NEK9-203ENST00000553945 LINC00205P59089 165 aa18.42■□□□□ 0.54
NEK9-203ENST00000553945 ARPC4P59998 168 aa18.42■□□□□ 0.54
NEK9-203ENST00000553945 OR5AU1Q8NGC0 362 aa18.42■□□□□ 0.54
NEK9-203ENST00000553945 CMTM3Q96MX0 182 aa18.42■□□□□ 0.54
NEK9-203ENST00000553945 SDHAF2Q9NX18 166 aa18.42■□□□□ 0.54
NEK9-203ENST00000553945 WASHC3Q9Y3C0 194 aa18.42■□□□□ 0.54
NEK9-203ENST00000553945 VWFP04275 2813 aa18.41■□□□□ 0.54
NEK9-203ENST00000553945 SMIM31A0A1B0GVY4 71 aa18.41■□□□□ 0.54
NEK9-203ENST00000553945 IGHG2P01859 326 aa18.41■□□□□ 0.54
NEK9-203ENST00000553945 SPCS2Q15005 226 aa18.41■□□□□ 0.54
NEK9-203ENST00000553945 FAM71E2Q8N5Q1 922 aa18.41■□□□□ 0.54
NEK9-203ENST00000553945 ZNF383Q8NA42 475 aa18.41■□□□□ 0.54
NEK9-203ENST00000553945 OR5AN1Q8NGI8 311 aa18.41■□□□□ 0.54
NEK9-203ENST00000553945 RAB2BQ8WUD1 216 aa18.41■□□□□ 0.54
NEK9-203ENST00000553945 IFT46Q9NQC8 304 aa18.41■□□□□ 0.54
NEK9-203ENST00000553945 SCOCQ9UIL1 159 aa18.41■□□□□ 0.54
NEK9-203ENST00000553945 GAB2Q9UQC2 676 aa18.41■□□□□ 0.54
NEK9-203ENST00000553945 MRPS7Q9Y2R9 242 aaKnown RBP18.41■□□□□ 0.54
NEK9-203ENST00000553945 ELK1P19419 428 aa18.4■□□□□ 0.54
NEK9-203ENST00000553945 TMBIM6P55061 237 aa18.4■□□□□ 0.54
NEK9-203ENST00000553945 C2orf68Q2NKX9 166 aa18.4■□□□□ 0.54
NEK9-203ENST00000553945 FOXRED2Q8IWF2 684 aa18.4■□□□□ 0.54
NEK9-203ENST00000553945 NOL4LQ96MY1 436 aaPredicted RBP18.4■□□□□ 0.54
NEK9-203ENST00000553945 LINC00527Q9UJ94 153 aa18.4■□□□□ 0.54
NEK9-203ENST00000553945 OR2W1Q9Y3N9 320 aa18.4■□□□□ 0.54
NEK9-203ENST00000553945 CMYA5Q8N3K9 4069 aa18.39■□□□□ 0.53
NEK9-203ENST00000553945 LINC01548A6NM66 108 aa18.39■□□□□ 0.53
NEK9-203ENST00000553945 NBR2O15453 112 aa18.39■□□□□ 0.53
NEK9-203ENST00000553945 NOL3O60936 208 aaKnown RBP18.39■□□□□ 0.53
NEK9-203ENST00000553945 APOA2P02652 100 aa18.39■□□□□ 0.53
NEK9-203ENST00000553945 SOX6P35712 828 aa18.39■□□□□ 0.53
NEK9-203ENST00000553945 LUMP51884 338 aaPredicted RBP18.39■□□□□ 0.53
NEK9-203ENST00000553945 NSUN5P1Q3KNT7 163 aa18.39■□□□□ 0.53
NEK9-203ENST00000553945 TREML4Q6UXN2 200 aa18.39■□□□□ 0.53
NEK9-203ENST00000553945 C5orf30Q96GV9 206 aa18.39■□□□□ 0.53
NEK9-203ENST00000553945 CITED2Q99967 270 aaPredicted RBP18.39■□□□□ 0.53
NEK9-203ENST00000553945 KIAA1456Q9P272 454 aa18.39■□□□□ 0.53
NEK9-203ENST00000553945 NBEAL1Q6ZS30 2694 aa18.39■□□□□ 0.53
NEK9-203ENST00000553945 PSMB11A5LHX3 300 aa18.38■□□□□ 0.53
NEK9-203ENST00000553945 FAM25AB3EWG3 89 aa18.38■□□□□ 0.53
NEK9-203ENST00000553945 FAM25CB3EWG5 89 aa18.38■□□□□ 0.53
NEK9-203ENST00000553945 FAM25GB3EWG6 89 aa18.38■□□□□ 0.53
NEK9-203ENST00000553945 KCNAB3O43448 404 aa18.38■□□□□ 0.53
NEK9-203ENST00000553945 TSPAN15O95858 294 aa18.38■□□□□ 0.53
NEK9-203ENST00000553945 CSF1P09603 554 aa18.38■□□□□ 0.53
NEK9-203ENST00000553945 PRSS3P35030 304 aa18.38■□□□□ 0.53
NEK9-203ENST00000553945 C10orf99Q6UWK7 81 aa18.38■□□□□ 0.53
NEK9-203ENST00000553945 NPBQ8NG41 125 aa18.38■□□□□ 0.53
NEK9-203ENST00000553945 CHPT1Q8WUD6 406 aa18.38■□□□□ 0.53
NEK9-203ENST00000553945 SNAPC3Q92966 411 aa18.38■□□□□ 0.53
NEK9-203ENST00000553945 BCL7BQ9BQE9 202 aa18.38■□□□□ 0.53
NEK9-203ENST00000553945 HSPB9Q9BQS6 159 aa18.38■□□□□ 0.53
NEK9-203ENST00000553945 NECAP2Q9NVZ3 263 aa18.38■□□□□ 0.53
NEK9-203ENST00000553945 RBBP9O75884 186 aa18.37■□□□□ 0.53
NEK9-203ENST00000553945 HLA-DQB1P01920 261 aa18.37■□□□□ 0.53
NEK9-203ENST00000553945 ZNF329Q86UD4 541 aa18.37■□□□□ 0.53
NEK9-203ENST00000553945 PDPNQ86YL7 162 aa18.37■□□□□ 0.53
NEK9-203ENST00000553945 OR4X2Q8NGF9 303 aa18.37■□□□□ 0.53
NEK9-203ENST00000553945 SLC35D1Q9NTN3 355 aa18.37■□□□□ 0.53
NEK9-203ENST00000553945 ZNF107Q9UII5 783 aaPredicted RBP18.37■□□□□ 0.53
NEK9-203ENST00000553945 AP4M1O00189 453 aa18.36■□□□□ 0.53
NEK9-203ENST00000553945 NDUFA3O95167 84 aa18.36■□□□□ 0.53
NEK9-203ENST00000553945 THBS3P49746 956 aa18.36■□□□□ 0.53
NEK9-203ENST00000553945 C5orf64Q2M2E5 130 aa18.36■□□□□ 0.53
NEK9-203ENST00000553945 SNX29P2Q8IUI4 249 aa18.36■□□□□ 0.53
NEK9-203ENST00000553945 STPG2Q8N412 459 aa18.36■□□□□ 0.53
NEK9-203ENST00000553945 ZNF645Q8N7E2 425 aa18.36■□□□□ 0.53
NEK9-203ENST00000553945 OR5AP2Q8NGF4 316 aa18.36■□□□□ 0.53
NEK9-203ENST00000553945 IGKV1D-13A0A0B4J2D9 117 aa18.35■□□□□ 0.53
NEK9-203ENST00000553945 TUSC2O75896 110 aa18.35■□□□□ 0.53
NEK9-203ENST00000553945 IGKV1-16P04430 117 aa18.35■□□□□ 0.53
NEK9-203ENST00000553945 OR5H8P0DN80 308 aa18.35■□□□□ 0.53
NEK9-203ENST00000553945 IGKV1-13P0DP09 117 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms