RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 H7C2Y5 167 aa20.58■□□□□ 0.89
CPSF6-205ENST00000550075 NOL3O60936 208 aaKnown RBP20.58■□□□□ 0.89
CPSF6-205ENST00000550075 RBBP9O75884 186 aa20.58■□□□□ 0.89
CPSF6-205ENST00000550075 IGHG2P01859 326 aa20.58■□□□□ 0.89
CPSF6-205ENST00000550075 APOA2P02652 100 aa20.58■□□□□ 0.89
CPSF6-205ENST00000550075 CT45A6P0DMU7 189 aa20.58■□□□□ 0.89
CPSF6-205ENST00000550075 CT45A5P0DMU8 189 aa20.58■□□□□ 0.89
CPSF6-205ENST00000550075 CT45A7P0DMV0 189 aa20.58■□□□□ 0.89
CPSF6-205ENST00000550075 RPL5P46777 297 aaKnown RBP20.58■□□□□ 0.89
CPSF6-205ENST00000550075 CLVS1Q8IUQ0 354 aaPredicted RBP20.58■□□□□ 0.89
CPSF6-205ENST00000550075 BEST4Q8NFU0 473 aa20.58■□□□□ 0.89
CPSF6-205ENST00000550075 WIPF2Q8TF74 440 aaPredicted RBP20.58■□□□□ 0.89
CPSF6-205ENST00000550075 RAB2BQ8WUD1 216 aa20.58■□□□□ 0.89
CPSF6-205ENST00000550075 BCL7BQ9BQE9 202 aa20.58■□□□□ 0.89
CPSF6-205ENST00000550075 PLSCR3Q9NRY6 295 aa20.58■□□□□ 0.89
CPSF6-205ENST00000550075 KIAA1456Q9P272 454 aa20.58■□□□□ 0.89
CPSF6-205ENST00000550075 SMIM31A0A1B0GVY4 71 aa20.57■□□□□ 0.88
CPSF6-205ENST00000550075 H0YJW9 148 aa20.57■□□□□ 0.88
CPSF6-205ENST00000550075 M0R1X1 148 aa20.57■□□□□ 0.88
CPSF6-205ENST00000550075 TAS2R20P59543 309 aa20.57■□□□□ 0.88
CPSF6-205ENST00000550075 HOGA1Q86XE5 327 aa20.57■□□□□ 0.88
CPSF6-205ENST00000550075 FAM71E2Q8N5Q1 922 aa20.57■□□□□ 0.88
CPSF6-205ENST00000550075 OR4X2Q8NGF9 303 aa20.57■□□□□ 0.88
CPSF6-205ENST00000550075 OR5AN1Q8NGI8 311 aa20.57■□□□□ 0.88
CPSF6-205ENST00000550075 CHPT1Q8WUD6 406 aa20.57■□□□□ 0.88
CPSF6-205ENST00000550075 IFT46Q9NQC8 304 aa20.57■□□□□ 0.88
CPSF6-205ENST00000550075 GAB2Q9UQC2 676 aa20.57■□□□□ 0.88
CPSF6-205ENST00000550075 NBR2O15453 112 aa20.56■□□□□ 0.88
CPSF6-205ENST00000550075 ZNF182P17025 639 aaPredicted RBP20.56■□□□□ 0.88
CPSF6-205ENST00000550075 SOX6P35712 828 aa20.56■□□□□ 0.88
CPSF6-205ENST00000550075 GLDNQ6ZMI3 551 aaPredicted RBP20.56■□□□□ 0.88
CPSF6-205ENST00000550075 OR5AU1Q8NGC0 362 aa20.56■□□□□ 0.88
CPSF6-205ENST00000550075 SCOCQ9UIL1 159 aa20.56■□□□□ 0.88
CPSF6-205ENST00000550075 MGAM2Q2M2H8 2515 aa20.56■□□□□ 0.88
CPSF6-205ENST00000550075 EIF4EP06730 217 aaKnown RBP20.55■□□□□ 0.88
CPSF6-205ENST00000550075 CSF1P09603 554 aa20.55■□□□□ 0.88
CPSF6-205ENST00000550075 CD28P10747 220 aa20.55■□□□□ 0.88
CPSF6-205ENST00000550075 LUMP51884 338 aaPredicted RBP20.55■□□□□ 0.88
CPSF6-205ENST00000550075 F2RL1P55085 397 aa20.55■□□□□ 0.88
CPSF6-205ENST00000550075 TREML4Q6UXN2 200 aa20.55■□□□□ 0.88
CPSF6-205ENST00000550075 OR2W1Q9Y3N9 320 aa20.55■□□□□ 0.88
CPSF6-205ENST00000550075 PSMB11A5LHX3 300 aa20.54■□□□□ 0.88
CPSF6-205ENST00000550075 AP4M1O00189 453 aa20.54■□□□□ 0.88
CPSF6-205ENST00000550075 SLC22A5O76082 557 aa20.54■□□□□ 0.88
CPSF6-205ENST00000550075 TMBIM6P55061 237 aa20.54■□□□□ 0.88
CPSF6-205ENST00000550075 SLC35B1P78383 322 aa20.54■□□□□ 0.88
CPSF6-205ENST00000550075 TAGLNQ01995 201 aaKnown RBP20.54■□□□□ 0.88
CPSF6-205ENST00000550075 CBX3Q13185 183 aa20.54■□□□□ 0.88
CPSF6-205ENST00000550075 PDPNQ86YL7 162 aa20.54■□□□□ 0.88
CPSF6-205ENST00000550075 GVQW1Q8N7I0 195 aa20.54■□□□□ 0.88
CPSF6-205ENST00000550075 MMP27Q9H306 513 aa20.54■□□□□ 0.88
CPSF6-205ENST00000550075 SDHAF2Q9NX18 166 aa20.54■□□□□ 0.88
CPSF6-205ENST00000550075 OPN1MWP04001 364 aa20.53■□□□□ 0.88
CPSF6-205ENST00000550075 OPN1MW2P0DN77 364 aa20.53■□□□□ 0.88
CPSF6-205ENST00000550075 OPN1MW3P0DN78 364 aa20.53■□□□□ 0.88
CPSF6-205ENST00000550075 PTHLHP12272 177 aa20.53■□□□□ 0.88
CPSF6-205ENST00000550075 NDUFA11Q86Y39 141 aa20.53■□□□□ 0.88
CPSF6-205ENST00000550075 DRAXINQ8NBI3 349 aaPredicted RBP20.53■□□□□ 0.88
CPSF6-205ENST00000550075 NPBQ8NG41 125 aa20.53■□□□□ 0.88
CPSF6-205ENST00000550075 ADTRPQ96IZ2 230 aa20.53■□□□□ 0.88
CPSF6-205ENST00000550075 RNF5Q99942 180 aa20.53■□□□□ 0.88
CPSF6-205ENST00000550075 GON7Q9BXV9 100 aa20.53■□□□□ 0.88
CPSF6-205ENST00000550075 NECAP2Q9NVZ3 263 aa20.53■□□□□ 0.88
CPSF6-205ENST00000550075 ZNF107Q9UII5 783 aaPredicted RBP20.53■□□□□ 0.88
CPSF6-205ENST00000550075 PROP1O75360 226 aa20.52■□□□□ 0.88
CPSF6-205ENST00000550075 NFYAP23511 347 aaPredicted RBP20.52■□□□□ 0.88
CPSF6-205ENST00000550075 PRSS3P35030 304 aa20.52■□□□□ 0.88
CPSF6-205ENST00000550075 THBS3P49746 956 aa20.52■□□□□ 0.88
CPSF6-205ENST00000550075 C5orf64Q2M2E5 130 aa20.52■□□□□ 0.88
CPSF6-205ENST00000550075 ZNF383Q8NA42 475 aa20.52■□□□□ 0.88
CPSF6-205ENST00000550075 TSNAXQ99598 290 aaKnown RBP20.52■□□□□ 0.88
CPSF6-205ENST00000550075 CITED2Q99967 270 aaPredicted RBP20.52■□□□□ 0.88
CPSF6-205ENST00000550075 SLC35D1Q9NTN3 355 aa20.52■□□□□ 0.88
CPSF6-205ENST00000550075 NBEAL1Q6ZS30 2694 aa20.51■□□□□ 0.87
CPSF6-205ENST00000550075 WNK1Q9H4A3 2382 aa20.51■□□□□ 0.87
CPSF6-205ENST00000550075 FAM25AB3EWG3 89 aa20.51■□□□□ 0.87
CPSF6-205ENST00000550075 FAM25CB3EWG5 89 aa20.51■□□□□ 0.87
CPSF6-205ENST00000550075 FAM25GB3EWG6 89 aa20.51■□□□□ 0.87
CPSF6-205ENST00000550075 HPGDSO60760 199 aa20.51■□□□□ 0.87
CPSF6-205ENST00000550075 NDUFA3O95167 84 aa20.51■□□□□ 0.87
CPSF6-205ENST00000550075 HLA-DRB1P01911 266 aa20.51■□□□□ 0.87
CPSF6-205ENST00000550075 PLGLAQ15195 96 aa20.51■□□□□ 0.87
CPSF6-205ENST00000550075 ZNF645Q8N7E2 425 aa20.51■□□□□ 0.87
CPSF6-205ENST00000550075 TRRAPQ9Y4A5 3859 aa20.51■□□□□ 0.87
CPSF6-205ENST00000550075 MEIS3P1A6NDR6 274 aa20.5■□□□□ 0.87
CPSF6-205ENST00000550075 SPDEFO95238 335 aa20.5■□□□□ 0.87
CPSF6-205ENST00000550075 HLA-DQB1P01920 261 aa20.5■□□□□ 0.87
CPSF6-205ENST00000550075 ELK1P19419 428 aa20.5■□□□□ 0.87
CPSF6-205ENST00000550075 CNTFRP26992 372 aa20.5■□□□□ 0.87
CPSF6-205ENST00000550075 RTL8BQ17RB0 113 aa20.5■□□□□ 0.87
CPSF6-205ENST00000550075 NSUN5P1Q3KNT7 163 aa20.5■□□□□ 0.87
CPSF6-205ENST00000550075 STPG2Q8N412 459 aa20.5■□□□□ 0.87
CPSF6-205ENST00000550075 COMMD1Q8N668 190 aa20.5■□□□□ 0.87
CPSF6-205ENST00000550075 RBMXL1Q96E39 390 aaKnown RBP20.5■□□□□ 0.87
CPSF6-205ENST00000550075 NOL4LQ96MY1 436 aaPredicted RBP20.5■□□□□ 0.87
CPSF6-205ENST00000550075 MRPS7Q9Y2R9 242 aaKnown RBP20.5■□□□□ 0.87
CPSF6-205ENST00000550075 PKD1L1Q8TDX9 2849 aa20.49■□□□□ 0.87
CPSF6-205ENST00000550075 RRHO14718 337 aa20.49■□□□□ 0.87
CPSF6-205ENST00000550075 TUSC2O75896 110 aa20.49■□□□□ 0.87
CPSF6-205ENST00000550075 TSPAN15O95858 294 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms