RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 GABARAPO95166 117 aa13.33□□□□□ -0.28
CD9-209ENST00000540891 TFAP2AP05549 437 aa13.33□□□□□ -0.28
CD9-209ENST00000540891 OR8U9P0C7N5 309 aa13.33□□□□□ -0.28
CD9-209ENST00000540891 PTHLHP12272 177 aa13.33□□□□□ -0.28
CD9-209ENST00000540891 MMDQ15546 238 aa13.33□□□□□ -0.28
CD9-209ENST00000540891 CTF1Q16619 201 aa13.33□□□□□ -0.28
CD9-209ENST00000540891 NDUFA11Q86Y39 141 aa13.33□□□□□ -0.28
CD9-209ENST00000540891 DRAXINQ8NBI3 349 aaPredicted RBP13.33□□□□□ -0.28
CD9-209ENST00000540891 OR8U1Q8NH10 309 aa13.33□□□□□ -0.28
CD9-209ENST00000540891 FAM110DQ8TAY7 271 aaPredicted RBP13.33□□□□□ -0.28
CD9-209ENST00000540891 RASL11BQ9BPW5 248 aa13.33□□□□□ -0.28
CD9-209ENST00000540891 AUNIPQ9H7T9 357 aa13.33□□□□□ -0.28
CD9-209ENST00000540891 ZNF221Q9UK13 617 aa13.33□□□□□ -0.28
CD9-209ENST00000540891 OR5H14A6NHG9 310 aa13.32□□□□□ -0.28
CD9-209ENST00000540891 NSUN5P1Q3KNT7 163 aa13.32□□□□□ -0.28
CD9-209ENST00000540891 ZNF329Q86UD4 541 aa13.32□□□□□ -0.28
CD9-209ENST00000540891 ZNF383Q8NA42 475 aa13.32□□□□□ -0.28
CD9-209ENST00000540891 PHF21AQ96BD5 680 aa13.32□□□□□ -0.28
CD9-209ENST00000540891 OR2D2Q9H210 308 aa13.32□□□□□ -0.28
CD9-209ENST00000540891 SDHAF2Q9NX18 166 aa13.32□□□□□ -0.28
CD9-209ENST00000540891 GAB2Q9UQC2 676 aa13.32□□□□□ -0.28
CD9-209ENST00000540891 PSMB11A5LHX3 300 aa13.31□□□□□ -0.28
CD9-209ENST00000540891 NBR2O15453 112 aa13.31□□□□□ -0.28
CD9-209ENST00000540891 NDUFA3O95167 84 aa13.31□□□□□ -0.28
CD9-209ENST00000540891 UBE2NLQ5JXB2 153 aa13.31□□□□□ -0.28
CD9-209ENST00000540891 GPR107Q5VW38 600 aa13.31□□□□□ -0.28
CD9-209ENST00000540891 STPG2Q8N412 459 aa13.31□□□□□ -0.28
CD9-209ENST00000540891 GVQW1Q8N7I0 195 aa13.31□□□□□ -0.28
CD9-209ENST00000540891 SAMD12Q8N8I0 201 aa13.31□□□□□ -0.28
CD9-209ENST00000540891 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.31□□□□□ -0.28
CD9-209ENST00000540891 NPBQ8NG41 125 aa13.31□□□□□ -0.28
CD9-209ENST00000540891 CHPT1Q8WUD6 406 aa13.31□□□□□ -0.28
CD9-209ENST00000540891 KCTD12Q96CX2 325 aaKnown RBP13.31□□□□□ -0.28
CD9-209ENST00000540891 GINS4Q9BRT9 223 aa13.31□□□□□ -0.28
CD9-209ENST00000540891 DIABLOQ9NR28 239 aa13.31□□□□□ -0.28
CD9-209ENST00000540891 ANXA10Q9UJ72 324 aa13.31□□□□□ -0.28
CD9-209ENST00000540891 WASHC3Q9Y3C0 194 aa13.31□□□□□ -0.28
CD9-209ENST00000540891 M0R1X1 148 aa13.3□□□□□ -0.28
CD9-209ENST00000540891 XRCC3O43542 346 aa13.3□□□□□ -0.28
CD9-209ENST00000540891 MC5RP33032 325 aa13.3□□□□□ -0.28
CD9-209ENST00000540891 SOX6P35712 828 aa13.3□□□□□ -0.28
CD9-209ENST00000540891 C5orf64Q2M2E5 130 aa13.3□□□□□ -0.28
CD9-209ENST00000540891 CNIH2Q6PI25 160 aa13.3□□□□□ -0.28
CD9-209ENST00000540891 FOXRED2Q8IWF2 684 aa13.3□□□□□ -0.28
CD9-209ENST00000540891 OR4X2Q8NGF9 303 aa13.3□□□□□ -0.28
CD9-209ENST00000540891 ZNF107Q9UII5 783 aaPredicted RBP13.3□□□□□ -0.28
CD9-209ENST00000540891 A0A1W2PRX2 142 aa13.29□□□□□ -0.28
CD9-209ENST00000540891 TCRBV4S1A1TA0A5B7 111 aa13.29□□□□□ -0.28
CD9-209ENST00000540891 AP4M1O00189 453 aa13.29□□□□□ -0.28
CD9-209ENST00000540891 KCNAB3O43448 404 aa13.29□□□□□ -0.28
CD9-209ENST00000540891 IGKV1-16P04430 117 aa13.29□□□□□ -0.28
CD9-209ENST00000540891 CTXN2P0C2S0 81 aa13.29□□□□□ -0.28
CD9-209ENST00000540891 NFYAP23511 347 aaPredicted RBP13.29□□□□□ -0.28
CD9-209ENST00000540891 HOGA1Q86XE5 327 aa13.29□□□□□ -0.28
CD9-209ENST00000540891 S100A16Q96FQ6 103 aaKnown RBP13.29□□□□□ -0.28
CD9-209ENST00000540891 IGHV7-81A0A0B4J1V7 117 aa13.28□□□□□ -0.28
CD9-209ENST00000540891 H7C2Y5 167 aa13.28□□□□□ -0.28
CD9-209ENST00000540891 RRHO14718 337 aa13.28□□□□□ -0.28
CD9-209ENST00000540891 HLA-DRB1P01911 266 aa13.28□□□□□ -0.28
CD9-209ENST00000540891 EIF4EP06730 217 aaKnown RBP13.28□□□□□ -0.28
CD9-209ENST00000540891 TAS2R20P59543 309 aa13.28□□□□□ -0.28
CD9-209ENST00000540891 CFHR3Q02985 330 aa13.28□□□□□ -0.28
CD9-209ENST00000540891 GPR141Q7Z602 305 aa13.28□□□□□ -0.28
CD9-209ENST00000540891 PDPNQ86YL7 162 aa13.28□□□□□ -0.28
CD9-209ENST00000540891 BEST4Q8NFU0 473 aa13.28□□□□□ -0.28
CD9-209ENST00000540891 FBXL15Q9H469 300 aa13.28□□□□□ -0.28
CD9-209ENST00000540891 COMMD3Q9UBI1 195 aa13.28□□□□□ -0.28
CD9-209ENST00000540891 OR2W1Q9Y3N9 320 aa13.28□□□□□ -0.28
CD9-209ENST00000540891 TSSC4Q9Y5U2 329 aaPredicted RBP13.28□□□□□ -0.28
CD9-209ENST00000540891 IGKV1D-13A0A0B4J2D9 117 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 MEIS3P1A6NDR6 274 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 J3QRK9 145 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 RBBP9O75884 186 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 TUSC2O75896 110 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 HLA-DQB1P01920 261 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 OPN1MWP04001 364 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 IGF1P05019 195 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 FCER2P06734 321 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 OPN1MW2P0DN77 364 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 OPN1MW3P0DN78 364 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 IGKV1-13P0DP09 117 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 NDPQ00604 133 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 TMEM69Q5SWH9 247 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 LIN54Q6MZP7 749 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 SNAPC3Q92966 411 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 R3HDM4Q96D70 268 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 RNF5Q99942 180 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 SLC35D1Q9NTN3 355 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 KIAA1456Q9P272 454 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 ZNF580Q9UK33 172 aa13.27□□□□□ -0.29
CD9-209ENST00000540891 RBM7Q9Y580 266 aaKnown RBP13.27□□□□□ -0.29
CD9-209ENST00000540891 IGLV2-14P01704 120 aa13.26□□□□□ -0.29
CD9-209ENST00000540891 RORCP51449 518 aa13.26□□□□□ -0.29
CD9-209ENST00000540891 SLC35B1P78383 322 aa13.26□□□□□ -0.29
CD9-209ENST00000540891 PSG5Q15238 335 aa13.26□□□□□ -0.29
CD9-209ENST00000540891 OR4F17Q8NGA8 305 aa13.26□□□□□ -0.29
CD9-209ENST00000540891 ACOT12Q8WYK0 555 aa13.26□□□□□ -0.29
CD9-209ENST00000540891 DDB2Q92466 427 aa13.26□□□□□ -0.29
CD9-209ENST00000540891 CMTM3Q96MX0 182 aa13.26□□□□□ -0.29
CD9-209ENST00000540891 OR4F4Q96R69 305 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms